Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20013
(724 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 143 3e-35
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 89 4e-19
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 89 6e-19
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 89 6e-19
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 89 6e-19
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 58 1e-09
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 35 0.014
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 34 0.024
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 33 0.055
SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit... 32 0.072
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.13
SPBC557.05 |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 30 0.38
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 30 0.38
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.38
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 29 0.89
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 29 0.89
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 29 0.89
SPAC11D3.08c |||amino acid permease, unknown 1|Schizosaccharomyc... 29 0.89
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 28 1.2
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 27 3.6
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 27 3.6
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 26 4.7
SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter family|Sch... 25 8.3
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 143 bits (346), Expect = 3e-35
Identities = 62/82 (75%), Positives = 73/82 (89%)
Frame = +3
Query: 264 WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAV 443
WYLSWALD+ EER+KGKTVEVGRAYFETE + F++LDAPGHK +V NMI GA+QAD+ V
Sbjct: 285 WYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGV 344
Query: 444 LVISARKGEFETGFDRGGQTRD 509
LVISAR+GEFE GF+RGGQTR+
Sbjct: 345 LVISARRGEFEAGFERGGQTRE 366
Score = 83.0 bits (196), Expect = 4e-17
Identities = 39/67 (58%), Positives = 50/67 (74%)
Frame = +1
Query: 118 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTYHGHWTQIK 297
KEHVN+VFIGHVDAGKST+GG I+ LTGMVDKRT+EK EREA+E + +++ W
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKE--SWYLSWALDS 293
Query: 298 KNETKAK 318
+E + K
Sbjct: 294 TSEEREK 300
Score = 64.9 bits (151), Expect = 1e-11
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLKNWVSIQRKT 667
HA+LA+T G+ HLV ++NKMD+P+V W E+RY EC +K+ +L+ KT
Sbjct: 367 HAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKT 419
Score = 27.5 bits (58), Expect = 2.1
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 646 GFNTAKDLSFLPVSGQTGQVIR 711
G+N+ D+ ++PVS TGQ ++
Sbjct: 414 GYNSKTDVKYMPVSAYTGQNVK 435
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 89.4 bits (212), Expect = 4e-19
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G +QAD AVL+I
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Query: 453 SARKGEFETGFDRGGQTRD 509
GEFE G + GQTR+
Sbjct: 117 GGGTGEFEAGISKDGQTRE 135
Score = 60.9 bits (141), Expect = 2e-10
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+NVV IGHVD+GKST G ++ G +DKRT+EK+E+EA E + Y
Sbjct: 4 EKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKY 56
Score = 43.6 bits (98), Expect = 3e-05
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLKNWVSIQRKTYP 673
HA+LA T GVK L+ VNKMD T W + R+ E ++ ++K V KT P
Sbjct: 136 HALLAYTLGVKQLIVAVNKMD--TTGWSQARFEEIVKETSNFIKK-VGFNPKTVP 187
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 89.0 bits (211), Expect = 6e-19
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G +QAD A+L+I
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILII 116
Query: 453 SARKGEFETGFDRGGQTRD 509
GEFE G + GQTR+
Sbjct: 117 GGGTGEFEAGISKDGQTRE 135
Score = 60.9 bits (141), Expect = 2e-10
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+NVV IGHVD+GKST G ++ G +DKRT+EK+E+EA E + Y
Sbjct: 4 EKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKY 56
Score = 43.6 bits (98), Expect = 3e-05
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLKNWVSIQRKTYP 673
HA+LA T GVK L+ VNKMD T W + R+ E ++ ++K V KT P
Sbjct: 136 HALLAYTLGVKQLIVAVNKMD--TTGWSQARFEEIVKETSNFIKK-VGFNPKTVP 187
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 89.0 bits (211), Expect = 6e-19
Identities = 39/79 (49%), Positives = 54/79 (68%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LDT +EER +G T++V FE++KK + I DAPGH+ F+ MI GA+ AD AVLV+
Sbjct: 227 AWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVV 286
Query: 453 SARKGEFETGFDRGGQTRD 509
+ + FE GF GQTR+
Sbjct: 287 DSSQNNFERGFLENGQTRE 305
Score = 50.8 bits (116), Expect = 2e-07
Identities = 30/106 (28%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Frame = +1
Query: 19 DTQVGNTNPNEDGELTKKIPKKKP------PRVEDTRSKKEHVNVVFIGHVDAGKSTIGG 180
+ ++ N++ +++ KKI K+ P P + + + K V++V GHVD+GKST+ G
Sbjct: 136 EVKMKNSSESDNQPEKKKIKKQNPTDLVSVPEIFEQSNPKPVVHLVVTGHVDSGKSTMLG 195
Query: 181 QIMSLTGMVDKRTLEKYEREAREKSENHGTYHGHWTQIKKNETKAK 318
+IM G ++ R+++K EA + G++ W E +A+
Sbjct: 196 RIMFELGEINSRSMQKLHNEAANSGK--GSFSYAWLLDTTEEERAR 239
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 89.0 bits (211), Expect = 6e-19
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G +QAD A+L+I
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILII 116
Query: 453 SARKGEFETGFDRGGQTRD 509
GEFE G + GQTR+
Sbjct: 117 GGGTGEFEAGISKDGQTRE 135
Score = 60.9 bits (141), Expect = 2e-10
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+NVV IGHVD+GKST G ++ G +DKRT+EK+E+EA E + Y
Sbjct: 4 EKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKY 56
Score = 43.6 bits (98), Expect = 3e-05
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLKNWVSIQRKTYP 673
HA+LA T GVK L+ VNKMD T W + R+ E ++ ++K V KT P
Sbjct: 136 HALLAYTLGVKQLIVAVNKMD--TTGWSQARFEEIVKETSNFIKK-VGFNPKTVP 187
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 58.0 bits (134), Expect = 1e-09
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D EE+ +G T+ +ET +H+ +D PGH ++ NMI GAA D A++V+SA
Sbjct: 91 IDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSAT 150
Query: 462 KGE 470
G+
Sbjct: 151 DGQ 153
Score = 32.7 bits (71), Expect = 0.055
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQI 186
KK HVN+ IGHVD GK+T+ I
Sbjct: 50 KKPHVNIGTIGHVDHGKTTLTAAI 73
Score = 29.1 bits (62), Expect = 0.67
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPY 634
H +LA+ GVK +V +NK+D + E E RE + Y
Sbjct: 160 HLLLARQVGVKQIVVYINKVDMVEPDMIELVEMEMRELLSEY 201
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 34.7 bits (76), Expect = 0.014
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +3
Query: 342 FETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
F+ K T LD PGH +F GA AD+ VLV++ G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 33.9 bits (74), Expect = 0.024
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 357 KHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARK 464
+H + +D PGH + M+ GAA D A+L+I+ +
Sbjct: 108 RHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNE 143
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 112 SKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 228
S++ +N+ IGHV GKST+ I + + K LE+
Sbjct: 19 SRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELER 57
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 32.7 bits (71), Expect = 0.055
Identities = 17/62 (27%), Positives = 25/62 (40%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D ER +G T+ F + ++D PGH F + A D AV +I
Sbjct: 68 MDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGS 127
Query: 462 KG 467
G
Sbjct: 128 AG 129
>SPAC23H3.13c |gpa2|git8|heterotrimeric G protein alpha-2 subunit
Gpa2 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 32.3 bits (70), Expect = 0.072
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 46 NEDGELTKKIPKKKPPRVEDTRSKKEHV-NVVFIGHVDAGKSTIGGQIMSL 195
+E GE +KK+ K ++E+ K + + V+ +G D+GKSTI QI L
Sbjct: 8 SESGE-SKKLNSKIEKQIENASKKDKKIYKVLLLGASDSGKSTISKQIKIL 57
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 31.5 bits (68), Expect = 0.13
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 130 NVVFIGHVDAGKSTIGGQIMSLTGMVDKRT-----LEKYEREAR 246
N I H+D GKST+ I+ LTG++++ L+K E E R
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNFRNQFLDKLEVERR 103
Score = 30.7 bits (66), Expect = 0.22
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRA----YFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLV 449
LD + ER +G TV+ Y+ + ++D PGH F ++ A + +L+
Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Query: 450 ISARKG 467
+ A +G
Sbjct: 155 VDASQG 160
>SPBC557.05 |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 29.9 bits (64), Expect = 0.38
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 96 SRRYTKQKRTCKCSIYRTCRCRKVDYWWSNNVTHWNG 206
SR+ ++ +TCKC T RC K +N +WNG
Sbjct: 289 SRKNSEVSKTCKCLQKETIRCNK-----KSNCYNWNG 320
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.9 bits (64), Expect = 0.38
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 369 ILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
I+D PGH+SF G + ++A+LVI G
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVIDIMHG 585
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 29.9 bits (64), Expect = 0.38
Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 73 IPKKKPPRVEDTRSKKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMVDKR 216
+P P ++ + +E++ N + HVD GK+T+ +++ G++ +
Sbjct: 1 MPVIPPEKLVSLQKNQENIRNFTLLAHVDHGKTTLADSLLASNGIISSK 49
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 28.7 bits (61), Expect = 0.89
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 88 PPRVEDTRSKKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMV 207
P V + K +V N+ I HVD GKST+ ++ G++
Sbjct: 6 PEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGII 46
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 28.7 bits (61), Expect = 0.89
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 16 LDTQVGNT--NPNEDGELTKKIPKKKPPRVEDTRSKKEHVN 132
L+ + NT NP E+ + T + K PP+ + + + KE++N
Sbjct: 564 LNNRAANTKLNPKEEDKSTVESELKAPPKEKSSETSKEYLN 604
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 28.7 bits (61), Expect = 0.89
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 88 PPRVEDTRSKKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMV 207
P V + K +V N+ I HVD GKST+ ++ G++
Sbjct: 6 PEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGII 46
>SPAC11D3.08c |||amino acid permease, unknown 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 28.7 bits (61), Expect = 0.89
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -3
Query: 149 CPINTTFTCSFLLRVSSTRGGFFFGIFFVNSPSSLGFVFPTC 24
C I + + L T GG +F IF + SPSS F+ C
Sbjct: 92 CLIPVSISLGELASSMPTSGGLYFWIFTLASPSSRAFLCWVC 133
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 363 FTILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
F +D PGH FV + A +D VLV+ +G
Sbjct: 211 FQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEG 245
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 103 DTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMV 207
D + K+ N+ H+D+GK+T +++ TG +
Sbjct: 52 DKKRLKQIRNIGISAHIDSGKTTFTERVLYYTGRI 86
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +3
Query: 267 YLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVL 446
+ +W +Q E ++ + + ++Y + I+D PGH F + D AVL
Sbjct: 121 HCTWERTVDQIEANEKQKTDFEKSY------NINIIDTPGHIDFTIEVERALRVLDGAVL 174
Query: 447 VISARKG 467
V+ A G
Sbjct: 175 VLCAVSG 181
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 26.6 bits (56), Expect = 3.6
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 309 KGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADL 437
KG EVG+A ET K F LD+ + V I A AD+
Sbjct: 58 KGDVTEVGKASIETAIKKFGKLDSVILNAGVLEPIAKIADADI 100
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 73 IPKKKPPRVEDTRSKKEHVNVV-FIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREARE 249
+ KK+P + + T++KKE + V+ + + G + + TG K + + E E E
Sbjct: 183 VQKKEPEKPKKTKTKKETIQVIESLNNPTPPTDFPGAKEQASTGNAPKNPVNENESEDEE 242
>SPCC1840.12 ||SPCC965.02|OPT oligopeptide transporter
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 791
Score = 25.4 bits (53), Expect = 8.3
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 342 FETEKKHFTILDAPGHKSFVPNM 410
F+ +KK F I++ GH+ FV ++
Sbjct: 43 FDEQKKSFEIINYAGHEKFVDDI 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,878,551
Number of Sequences: 5004
Number of extensions: 56615
Number of successful extensions: 229
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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