Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20013
(724 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 135 4e-32
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 122 4e-28
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 93 2e-19
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 93 2e-19
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 93 2e-19
03_01_0548 + 4099386-4099847,4100435-4101316 87 1e-17
03_01_0547 + 4093196-4093657,4094267-4095148 87 1e-17
03_01_0544 + 4082528-4082989,4083585-4084466 87 1e-17
03_01_0543 + 4076981-4077442,4078145-4079026 87 1e-17
02_04_0462 + 23131433-23132836 63 2e-10
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 61 8e-10
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 36 0.033
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 36 0.043
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 35 0.075
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 35 0.075
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 34 0.13
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 33 0.17
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 32 0.40
06_03_0985 + 26573150-26573375,26573539-26573555 32 0.53
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 32 0.53
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 32 0.53
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 31 0.93
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 31 0.93
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 31 1.2
08_02_0321 - 15761468-15761512,15761573-15761673,15761854-157619... 29 2.8
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311... 29 2.8
12_02_0394 - 18563068-18563108,18563170-18563455,18565606-185656... 29 3.7
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 29 4.9
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 29 4.9
12_02_0715 - 22453747-22453935,22454347-22454457,22454514-224545... 28 8.6
12_02_0386 + 18429675-18430679,18431001-18431111,18431139-184311... 28 8.6
09_02_0539 - 10408398-10409552 28 8.6
08_02_1107 + 24357113-24357288,24357530-24357590,24358736-24359575 28 8.6
08_01_0842 - 8252232-8253155 28 8.6
04_04_0964 - 29749624-29749649,29749742-29749945,29750036-297506... 28 8.6
04_01_0103 + 1082077-1082167,1083037-1085477 28 8.6
03_05_0370 + 23541188-23542537 28 8.6
02_04_0017 + 18937774-18937864,18938505-18940945 28 8.6
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 135 bits (326), Expect = 4e-32
Identities = 62/86 (72%), Positives = 75/86 (87%), Gaps = 4/86 (4%)
Frame = +3
Query: 264 WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP----GHKSFVPNMIGGAAQA 431
WY+++ +DTN+EER KGKTVEVGRA+FETE FTILDAP GHKS+VPNMI GA+QA
Sbjct: 41 WYMAYIMDTNEEERLKGKTVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQA 100
Query: 432 DLAVLVISARKGEFETGFDRGGQTRD 509
D+ VLVISARKGEFETG+++GGQTR+
Sbjct: 101 DIGVLVISARKGEFETGYEKGGQTRE 126
Score = 60.5 bits (140), Expect = 1e-09
Identities = 22/45 (48%), Positives = 35/45 (77%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLKN 643
H +LAKT GV L+ ++NKMD+PTV W ++RY+E K++P+L++
Sbjct: 127 HVLLAKTLGVAKLIVVINKMDEPTVKWSKERYDEIESKMVPFLRS 171
Score = 54.4 bits (125), Expect = 9e-08
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 154 DAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKS 255
DAGKST GGQI+ L+G VD RT++KYE+EA++KS
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKS 37
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 122 bits (293), Expect = 4e-28
Identities = 56/75 (74%), Positives = 65/75 (86%)
Frame = +3
Query: 285 DTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARK 464
D + + KGKTVEVGRA+FETE FTILDAPGHKS+VPNMI GA+QAD+ VLVISARK
Sbjct: 7 DLSIKMEPKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARK 66
Query: 465 GEFETGFDRGGQTRD 509
GEFETG++RGGQTR+
Sbjct: 67 GEFETGYERGGQTRE 81
Score = 58.4 bits (135), Expect = 5e-09
Identities = 23/45 (51%), Positives = 34/45 (75%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLKN 643
H +LAKT GV LV ++NKMD+ TV W ++RY+E K++P+LK+
Sbjct: 82 HVLLAKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMVPFLKS 126
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+WA+D + EER++G T+ V AY ET+K +LD+PGHK FVPNMI GA QAD A+LV+
Sbjct: 297 AWAMDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVV 356
Query: 453 SARKGEFETGFD-RGGQT 503
A G FE G D GG++
Sbjct: 357 DACTGSFEAGMDGEGGKS 374
Score = 54.8 bits (126), Expect = 7e-08
Identities = 22/64 (34%), Positives = 42/64 (65%)
Frame = +1
Query: 127 VNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTYHGHWTQIKKNE 306
+N+ +GHVD+GKST+ G+++ L G + K+ + K E+EA+EK + G++ W + +E
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGK--GSFAYAWAMDESSE 305
Query: 307 TKAK 318
+ +
Sbjct: 306 ERER 309
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLKN 643
HA L ++ GV+ L+ VNKMD + + ++R+ + ++ +L++
Sbjct: 381 HAQLIRSFGVEQLIVAVNKMD--AIGYSKERFEFIKVQLGSFLRS 423
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 93.5 bits (222), Expect = 2e-19
Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+WA+D + EER++G T+ V AY ET+K +LD+PGHK FVPNMI GA QAD A+LV+
Sbjct: 297 AWAMDESSEERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVV 356
Query: 453 SARKGEFETGFD-RGGQT 503
A G FE G D GG++
Sbjct: 357 DACTGSFEAGMDGEGGKS 374
Score = 54.8 bits (126), Expect = 7e-08
Identities = 22/64 (34%), Positives = 42/64 (65%)
Frame = +1
Query: 127 VNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTYHGHWTQIKKNE 306
+N+ +GHVD+GKST+ G+++ L G + K+ + K E+EA+EK + G++ W + +E
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGK--GSFAYAWAMDESSE 305
Query: 307 TKAK 318
+ +
Sbjct: 306 ERER 309
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLKN 643
HA L ++ GV+ L+ VNKMD + + ++R+ + ++ +L++
Sbjct: 381 HAQLIRSFGVEQLIVAVNKMD--AIGYSKERFEFIKVQLGSFLRS 423
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/81 (51%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+WA+D + +ER++G T+ VG AYF+T+ H +LD+PGHK FVPNMI GA Q+D A+LVI
Sbjct: 284 AWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVI 343
Query: 453 SARKGEFETGFDRG--GQTRD 509
A G FE G GQT++
Sbjct: 344 DASIGSFEAGMGINGIGQTKE 364
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 87.4 bits (207), Expect = 1e-17
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G +QAD AVL+I
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Query: 453 SARKGEFETGFDRGGQTRD 509
+ G FE G + GQTR+
Sbjct: 117 DSTTGGFEAGISKDGQTRE 135
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+N+V IGHVD+GKST G ++ G +DKR +E++E+EA E ++ Y
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY 56
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLK 640
HA+LA T GVK ++ NKMD T + + RY+E +++ YLK
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLK 179
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 87.4 bits (207), Expect = 1e-17
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G +QAD AVL+I
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Query: 453 SARKGEFETGFDRGGQTRD 509
+ G FE G + GQTR+
Sbjct: 117 DSTTGGFEAGISKDGQTRE 135
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+N+V IGHVD+GKST G ++ G +DKR +E++E+EA E ++ Y
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY 56
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLK 640
HA+LA T GVK ++ NKMD T + + RY+E +++ YLK
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLK 179
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 87.4 bits (207), Expect = 1e-17
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G +QAD AVL+I
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Query: 453 SARKGEFETGFDRGGQTRD 509
+ G FE G + GQTR+
Sbjct: 117 DSTTGGFEAGISKDGQTRE 135
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+N+V IGHVD+GKST G ++ G +DKR +E++E+EA E ++ Y
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY 56
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLK 640
HA+LA T GVK ++ NKMD T + + RY+E +++ YLK
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLK 179
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 87.4 bits (207), Expect = 1e-17
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G +QAD AVL+I
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Query: 453 SARKGEFETGFDRGGQTRD 509
+ G FE G + GQTR+
Sbjct: 117 DSTTGGFEAGISKDGQTRE 135
Score = 58.4 bits (135), Expect = 5e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+N+V IGHVD+GKST G ++ G +DKR +E++E+EA E ++ Y
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY 56
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLK 640
HA+LA T GVK ++ NKMD T + + RY+E +++ YLK
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLK 179
>02_04_0462 + 23131433-23132836
Length = 467
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D EER +G T+ +ETE +H+ +D PGH +V NMI GAAQ D A+LV+S
Sbjct: 108 IDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 167
Query: 462 KG 467
G
Sbjct: 168 DG 169
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 118 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYE 234
K HVN+ IGHVD GK+T+ + + V +KY+
Sbjct: 68 KPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYD 106
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 61.3 bits (142), Expect = 8e-10
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D EE+ +G T+ +ET K+H+ +D PGH +V NMI GAAQ D +LV+SA
Sbjct: 105 IDKAPEEKARGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAP 164
Query: 462 KG 467
G
Sbjct: 165 DG 166
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 118 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDK 213
K HVNV IGHVD GK+T+ I + K
Sbjct: 65 KPHVNVGTIGHVDHGKTTLTAAITKVLAEAGK 96
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 35.9 bits (79), Expect = 0.033
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 130 NVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 228
N I H+D GKST+ +++ LTG V KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
Score = 31.9 bits (69), Expect = 0.53
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRA---YFETEKKH-FTILDAPGHKSFVPNMIGGAAQADLAVLV 449
LD ER++G T+++ A Y ++ + ++D PGH F + A + A+LV
Sbjct: 114 LDNMDLERERGITIKLQAARMRYIMNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLV 173
Query: 450 ISARKG 467
+ A +G
Sbjct: 174 VDASQG 179
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 35.5 bits (78), Expect = 0.043
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 97 VEDTRSKKEHVNVVFIGHVDAG 162
VE+ + K H+NVVFIGHVD G
Sbjct: 97 VEEEKETKRHLNVVFIGHVDPG 118
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 34.7 bits (76), Expect = 0.075
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 366 TILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
T LD PGH +F GAA D+ VLV++A G
Sbjct: 248 TFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDG 281
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 34.7 bits (76), Expect = 0.075
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 303 RDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
R++ K ++ G A F ++D PGH+SF G++ D+A+LV+ +G
Sbjct: 470 RERTKELKAGAAL---HVPGFLVIDTPGHQSFSNLRTRGSSLCDIAILVVDIMRG 521
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 357 KHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARK 464
+H + +D PGH + M+ GAA D A+L+I+A +
Sbjct: 148 RHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE 183
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 58 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 228
+L+K K P + S++ +N+ IGHV GKST+ I + + K LE+
Sbjct: 38 DLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELER 94
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D+ ER+KG T++ Y I+D PGH F + D A+LV+ +
Sbjct: 111 MDSMDLEREKGITIQSAATYCTWNGYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 170
Query: 462 KG 467
G
Sbjct: 171 GG 172
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 130 NVVFIGHVDAGKSTIGGQIMSLTGMVDK 213
N I HVD GKST+ +++ LTG + K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK 86
>06_03_0985 + 26573150-26573375,26573539-26573555
Length = 80
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = +1
Query: 112 SKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTYHGHWTQ 291
S+ ++ I HV AG +G + L G+ D R E+ E+ RE+ E W Q
Sbjct: 11 SEMRRIDYGSIWHVIAGNIGLGVTLFGLKGLHDMRMEEREEKWNREREERLEAARKEWIQ 70
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 369 ILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
I+D PGH +F M AD AVLV+ A +G
Sbjct: 223 IMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.9 bits (69), Expect = 0.53
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +3
Query: 279 ALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISA 458
A+D+ ER++G T+ ++ ++D PGH F + + AVLV+ A
Sbjct: 97 AMDSISLERERGITIASKVTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDA 156
Query: 459 RKG 467
+G
Sbjct: 157 GEG 159
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 31.1 bits (67), Expect = 0.93
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
Frame = +3
Query: 288 TNQEERDKGK-TVEVGRAYFETE------KKH----FTILDAPGHKSFVPNMIGGAAQAD 434
TN ++ D G T ++G Y E K H ++D PGH+SF G + D
Sbjct: 469 TNVQKGDAGGITQQIGATYVPVEYVKERAKPHKVPGLLVIDTPGHESFSNMRSRGMSLCD 528
Query: 435 LAVLVISARKG 467
+AV+V+ G
Sbjct: 529 IAVVVVDIMHG 539
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 372 LDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
LD PGH++F GA D+ ++V+SA G
Sbjct: 483 LDTPGHEAFGAMRARGARVTDICIIVVSADDG 514
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 369 ILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
++D PGH+SF G++ D+A+LV+ G
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVVDIMHG 798
>08_02_0321 -
15761468-15761512,15761573-15761673,15761854-15761950,
15762671-15762742,15762838-15762960,15763047-15763129,
15763269-15763410,15763496-15763654
Length = 273
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -3
Query: 149 CPINTTFTCSFLLRVSSTRGGFFFGIFFVNSPSSLGFV 36
C T+ TC+F L TR G FF ++F + S L FV
Sbjct: 27 CASATSNTCAFSLAEHLTREGMFFDLYF-RTQSYLRFV 63
>05_03_0645 +
16529635-16529794,16530188-16530312,16531100-16531173,
16531961-16532006,16532638-16532730,16534429-16535886
Length = 651
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -1
Query: 571 IHLVYK-CYQMFHSSCFS*HRMSRVCPPLSKPVSNSPLRAEMTNTARS 431
+HLV C MFH C SRV P L P ++P+ RS
Sbjct: 391 LHLVLPVCSHMFHQRCLVAWLRSRVTPLLCCPECHAPITTRCRTDKRS 438
>12_02_0394 -
18563068-18563108,18563170-18563455,18565606-18565664,
18567524-18567611
Length = 157
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +1
Query: 25 QVGNTNPNEDGELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGM 204
Q+ T+P+ G L K++ K PP V TR+ +G V+ G+ +GG + SL M
Sbjct: 3 QIPRTSPHYYGMLPKQMSKGHPPMV--TRA---------VGGVEKGE--VGGNVRSLQVM 49
Query: 205 VDKRTLEKYEREAREKSENHGTYHGHW 285
K K ++ + + Y W
Sbjct: 50 HSKELQAKIRKQLQRVELSPSLYDTAW 76
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSF 398
+D+N ER++G T+ + I+D PGH F
Sbjct: 157 MDSNDLERERGITILSKNTSITYKGTKINIIDTPGHSDF 195
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 115 KKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMV 207
KK+++ N+ I HVD GKST+ +++ G++
Sbjct: 15 KKDNIRNMSVIAHVDHGKSTLTDSLVAAAGII 46
>12_02_0715 -
22453747-22453935,22454347-22454457,22454514-22454572,
22454893-22455067,22455255-22455307,22455670-22455739,
22457044-22457218,22457639-22457703,22458196-22460826
Length = 1175
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 321 VEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLA 440
VE G +YF++ + I P H + V ++ G A Q D A
Sbjct: 664 VEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRA 703
>12_02_0386 +
18429675-18430679,18431001-18431111,18431139-18431195,
18431552-18431589,18431688-18431733,18431811-18431849
Length = 431
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 321 VEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGA 422
VE G+ YFE K + + +P H + V ++ G A
Sbjct: 220 VEYGKNYFELMKTTYAVQQSPDHYACVVDLYGRA 253
>09_02_0539 - 10408398-10409552
Length = 384
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 582 TVGSSILFTSATKCFTPAVLANIACHE 502
T+G F ++TKCF +V A AC E
Sbjct: 312 TLGDRAFFVNSTKCFGASVSAKEACLE 338
>08_02_1107 + 24357113-24357288,24357530-24357590,24358736-24359575
Length = 358
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 155 STCPI-NTTFTCSFLLRVSSTRGGFFFGIFFVNSP 54
S CP+ N TC+ LL V T GF G F +++P
Sbjct: 159 SPCPLANIVGTCNGLLCVVGTGAGFTTGGFVLSNP 193
>08_01_0842 - 8252232-8253155
Length = 307
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 294 QEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISA 458
QE++ E+ +K +ILD GH F + GAA A+ A SA
Sbjct: 56 QEKQSSPPLGEIADQAVSRFRKVISILDRTGHARFRRGPVVGAAAAEAAAAAASA 110
>04_04_0964 -
29749624-29749649,29749742-29749945,29750036-29750634,
29750742-29750826,29750914-29751562,29751568-29751643,
29753891-29753957,29754097-29754998,29756579-29756790
Length = 939
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = -3
Query: 446 QYSEVSLSSPTNHVWNKTFVSRGIKNCKMLLFSLKISSSNFYCFAFVSFFLICVQ 282
++ +V+ N F +K +L F L++ ++F+ F VS+F +C++
Sbjct: 620 EFLDVAADVDMNSNLPTDFARPTLKEKFLLNFKLELEYNSFFAFDHVSYFRMCLE 674
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 115 KKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMV 207
KK ++ N+ I HVD GKST+ +++ G++
Sbjct: 15 KKNNIRNMSVIAHVDHGKSTLTDSLVAAAGII 46
>03_05_0370 + 23541188-23542537
Length = 449
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 321 VEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLA 440
V+ GRA F K+ + I P H + +++G A Q D A
Sbjct: 316 VDEGRAMFHLMKRQYGINPGPEHYACFIDLLGRAGQIDEA 355
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 115 KKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMV 207
KK ++ N+ I HVD GKST+ +++ G++
Sbjct: 15 KKNNIRNMSVIAHVDHGKSTLTDSLVAAAGII 46
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,009,909
Number of Sequences: 37544
Number of extensions: 340588
Number of successful extensions: 1113
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1112
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -