Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20013
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 162 2e-40
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 107 8e-24
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 107 8e-24
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 91 6e-19
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 91 6e-19
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 91 6e-19
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 73 2e-13
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 66 2e-11
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 60 2e-09
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 60 2e-09
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 60 2e-09
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 59 3e-09
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 59 3e-09
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.005
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.16
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 33 0.27
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 33 0.27
Z68004-7|CAA91988.2| 237|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 30 1.9
U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alph... 29 2.5
AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeri... 29 2.5
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 29 2.5
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 29 3.4
Z93394-1|CAB07703.1| 369|Caenorhabditis elegans Hypothetical pr... 28 5.9
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 28 5.9
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 28 5.9
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 28 5.9
AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in ... 28 5.9
AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in ... 28 5.9
AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in ... 28 5.9
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 28 5.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 5.9
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 28 7.8
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 28 7.8
AC006695-8|AAF39976.1| 351|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 162 bits (394), Expect = 2e-40
Identities = 73/82 (89%), Positives = 78/82 (95%)
Frame = +3
Query: 264 WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAV 443
WYLSW +DTN EER+KGKTVEVGRAYFETEK+HFTILDAPGHKSFVPNMI GA QADLAV
Sbjct: 156 WYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAV 215
Query: 444 LVISARKGEFETGFDRGGQTRD 509
LVISAR+GEFETGFDRGGQTR+
Sbjct: 216 LVISARRGEFETGFDRGGQTRE 237
Score = 95.9 bits (228), Expect = 3e-20
Identities = 49/100 (49%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Frame = +1
Query: 22 TQVGNTNPNEDGELTKKIPKKKPPRVE-DTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLT 198
T+ P + +L + KK V D + KEH+N+VF+GHVDAGKSTIGGQ+M LT
Sbjct: 74 TEAPKKEPTPEEDLVAPLAKKFQRTVYVDDGTHKEHINMVFVGHVDAGKSTIGGQLMFLT 133
Query: 199 GMVDKRTLEKYEREAREKSENHGTYHGHWTQIKKNETKAK 318
GMVDKRTLEKYEREA+EK +++ W +E + K
Sbjct: 134 GMVDKRTLEKYEREAKEKGRE--SWYLSWCMDTNDEEREK 171
Score = 70.5 bits (165), Expect = 1e-12
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLK 640
H+ML KTAGVKHLV LVNKMDDPTV W+E+R+ E K+ P+L+
Sbjct: 238 HSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLR 281
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 107 bits (257), Expect = 8e-24
Identities = 45/87 (51%), Positives = 63/87 (72%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD +EER++G T+++GR FET + +LDAPGHK F+ NMI G +QAD A+LV+
Sbjct: 220 AWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVV 279
Query: 453 SARKGEFETGFDRGGQTRDMRC*LKQL 533
+A GEFETGF+ GGQT++ L+ L
Sbjct: 280 NATTGEFETGFENGGQTKEHALLLRSL 306
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 RHEEELDTQVGNTNPNEDGELTKKIPKKKP-PRVEDTRSKKEHVNVVFIGHVDAGKSTIG 177
R E+D N ++ + +K P PRV D K+ +N++ +GHVDAGKST+
Sbjct: 132 RPSSEVDLTSFRRNQLQNIAKAPSVARKTPKPRVAD----KDLINLIVVGHVDAGKSTLM 187
Query: 178 GQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
G ++ +VD RT++K++ EA + Y
Sbjct: 188 GHLLHDLEVVDSRTIDKFKHEAARNGKASFAY 219
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLKNWVSIQR-KTYPSFLF 685
HA+L ++ GV L+ VNK+D TV+W + R++E + + +L + K P F
Sbjct: 299 HALLLRSLGVTQLIVAVNKLD--TVDWSQDRFDEIKNNLSVFLTRQAGFSKPKFVPVSGF 356
Query: 686 PGK 694
G+
Sbjct: 357 TGE 359
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 107 bits (257), Expect = 8e-24
Identities = 45/87 (51%), Positives = 63/87 (72%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD +EER++G T+++GR FET + +LDAPGHK F+ NMI G +QAD A+LV+
Sbjct: 238 AWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVV 297
Query: 453 SARKGEFETGFDRGGQTRDMRC*LKQL 533
+A GEFETGF+ GGQT++ L+ L
Sbjct: 298 NATTGEFETGFENGGQTKEHALLLRSL 324
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 RHEEELDTQVGNTNPNEDGELTKKIPKKKP-PRVEDTRSKKEHVNVVFIGHVDAGKSTIG 177
R E+D N ++ + +K P PRV D K+ +N++ +GHVDAGKST+
Sbjct: 150 RPSSEVDLTSFRRNQLQNIAKAPSVARKTPKPRVAD----KDLINLIVVGHVDAGKSTLM 205
Query: 178 GQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
G ++ +VD RT++K++ EA + Y
Sbjct: 206 GHLLHDLEVVDSRTIDKFKHEAARNGKASFAY 237
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLKNWVSIQR-KTYPSFLF 685
HA+L ++ GV L+ VNK+D TV+W + R++E + + +L + K P F
Sbjct: 317 HALLLRSLGVTQLIVAVNKLD--TVDWSQDRFDEIKNNLSVFLTRQAGFSKPKFVPVSGF 374
Query: 686 PGK 694
G+
Sbjct: 375 TGE 377
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 91.5 bits (217), Expect = 6e-19
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVLV+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
Query: 453 SARKGEFETGFDRGGQTRD 509
+ GEFE G + GQTR+
Sbjct: 117 ACGTGEFEAGISKNGQTRE 135
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+N+V IGHVD+GKST G ++ G +DKRT+EK+E+EA+E + Y
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 56
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 91.5 bits (217), Expect = 6e-19
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVLV+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
Query: 453 SARKGEFETGFDRGGQTRD 509
+ GEFE G + GQTR+
Sbjct: 117 ACGTGEFEAGISKNGQTRE 135
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+N+V IGHVD+GKST G ++ G +DKRT+EK+E+EA+E + Y
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 56
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLK 640
HA+LA+T GVK L+ NKMD + E R+ E ++ ++K
Sbjct: 136 HALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIK 179
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 91.5 bits (217), Expect = 6e-19
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVLV+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
Query: 453 SARKGEFETGFDRGGQTRD 509
+ GEFE G + GQTR+
Sbjct: 117 ACGTGEFEAGISKNGQTRE 135
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+N+V IGHVD+GKST G ++ G +DKRT+EK+E+EA+E + Y
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 56
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLK 640
HA+LA+T GVK L+ NKMD + E R+ E ++ ++K
Sbjct: 136 HALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIK 179
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 73.3 bits (172), Expect = 2e-13
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVLV+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
Query: 453 SARK 464
+ K
Sbjct: 117 ACNK 120
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+N+V IGHVD+GKST G ++ G +DKRT+EK+E+EA+E + Y
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 56
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTYHGHWTQI 294
+K H+N+V IGHVD+GKST G ++ G +DKRT+EK+E+EA+E + G++ W
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK--GSFKYAWVLD 61
Query: 295 KKNETKAKQ 321
K TK+ Q
Sbjct: 62 KLKVTKSAQ 70
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D EE+ +G T+ +ET K+H+ +D PGH ++ NMI GAAQ + A+LV++A
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 462 KG 467
G
Sbjct: 147 DG 148
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 118 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYE 234
K H+NV IGHVD GK+T+ I + KYE
Sbjct: 47 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 85
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D EE+ +G T+ +ET K+H+ +D PGH ++ NMI GAAQ + A+LV++A
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 462 KG 467
G
Sbjct: 148 DG 149
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 118 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYE 234
K H+NV IGHVD GK+T+ I + KYE
Sbjct: 48 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 86
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D EE+ +G T+ +ET K+H+ +D PGH ++ NMI GAAQ + A+LV++A
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 462 KG 467
G
Sbjct: 148 DG 149
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 118 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYE 234
K H+NV IGHVD GK+T+ I + KYE
Sbjct: 48 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 86
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D +EE+ +G T+ V +E+ + ++ D PGH F+ NMI G +Q D+AVLVI+A
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 462 KGEFE 476
G E
Sbjct: 143 DGVME 147
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/65 (40%), Positives = 40/65 (61%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D +EE+ +G T+ V +E+ + ++ D PGH F+ NMI G +Q D+AVLVI+A
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 462 KGEFE 476
G E
Sbjct: 143 DGVME 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 312 GKTVEVGRAYFE-TEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
G T +G E T+ + T LD PGH +F GA AD+ VLV++A G
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
LD Q ER++G TV+ A ++D PGH F + A D +L+++A
Sbjct: 77 LDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAAN 136
Query: 462 KG 467
+G
Sbjct: 137 QG 138
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +1
Query: 130 NVVFIGHVDAGKSTIGGQIMSLTGMV---DKRTLEKYEREAREK 252
N + HVD GKST+ +++ + G V K+ L+K + E RE+
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVE-RER 86
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D+ ++E+ +G T++ E ++D+PGH F + +D+A+L+I
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVI 117
Query: 462 KG 467
+G
Sbjct: 118 EG 119
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 121 EHV-NVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYE-REAREKSENHG 267
EH+ NV + HVD GK++ ++S ++ R K ++RE + G
Sbjct: 18 EHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRG 68
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D+ ++E+ +G T++ E ++D+PGH F + +D+A+L+I
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLIDVI 117
Query: 462 KG 467
+G
Sbjct: 118 EG 119
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 121 EHV-NVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYE-REAREKSENHG 267
EH+ NV + HVD GK++ ++S ++ R K ++RE + G
Sbjct: 18 EHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRG 68
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+D ER +G T++ Y + + I+D PGH F + D AVLV+
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL 143
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 363 FTILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
F I+D PGH+SF G++ D A+LV+ G
Sbjct: 551 FLIIDTPGHESFSNLRTRGSSLCDFAILVVDIMHG 585
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 357 KHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARK 464
+H + +D PGH + M+ GAA D A L+++ +
Sbjct: 127 RHVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNE 162
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 91 PRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 228
P E+ S++ +N+ IGHV GKST+ + + KR LE+
Sbjct: 29 PLTEEVISRQATINIGTIGHVAHGKSTLVKAFSGVHTVKFKRELER 74
>Z68004-7|CAA91988.2| 237|Caenorhabditis elegans Hypothetical
protein F47B10.8 protein.
Length = 237
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -1
Query: 604 ISFLIPVNCWIIHLVYKCYQMF 539
+SF+I +NC +H+VY+ +Q F
Sbjct: 199 MSFVIVINCIFLHVVYRTFQFF 220
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 169 TIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTYHGHWTQIKKNETKAK 318
++GG ++ G++ T+EK R R + + HG HGH +K ETK K
Sbjct: 245 SVGGWVLG--GIIAFLTVEKLVRILRGE-DGHGHSHGHSHGGEKKETKEK 291
>U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alpha
subunit protein 10 protein.
Length = 356
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 58 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 228
E+ K++ KKK ++E T V+ +G ++GKST+ Q+ ++TG K L +
Sbjct: 22 EIEKQLEKKKNMQLEQT--------VLLLGPGESGKSTVMKQMRAMTGNYTKTELHE 70
>AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 58 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 228
E+ K++ KKK ++E T V+ +G ++GKST+ Q+ ++TG K L +
Sbjct: 22 EIEKQLEKKKNMQLEQT--------VLLLGPGESGKSTVMKQMRAMTGNYTKTELHE 70
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 398 KTFVSRGIKNCKMLLFSLKISSSNFYCFAFVSFFLICVQ 282
K VS + CK LL S K FYC F ++ L ++
Sbjct: 213 KKIVSLALLRCKQLLKSFKSLCPEFYCNLFKTYILPLIE 251
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 130 NVVFIGHVDAGKSTIGGQIMSLTGMV 207
N+ I HVDAGK+T+ +++ L G +
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>Z93394-1|CAB07703.1| 369|Caenorhabditis elegans Hypothetical
protein Y48E1C.2 protein.
Length = 369
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 212 KEH*KNMKEKRERNQRIMVLI 274
KEH +NMKEK E N +I+ +I
Sbjct: 60 KEHIRNMKEKVEHNSQILRMI 80
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 369 ILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
I+D PGH +F M AD V+++ A +G
Sbjct: 205 IIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 369 ILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
I+D PGH +F M AD V+++ A +G
Sbjct: 80 IIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 16 LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSKK 120
+D + N+N +DG TK+ P + P T+S+K
Sbjct: 1069 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 1103
>AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform b protein.
Length = 871
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 16 LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSKK 120
+D + N+N +DG TK+ P + P T+S+K
Sbjct: 827 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 861
>AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform d protein.
Length = 807
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 16 LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSKK 120
+D + N+N +DG TK+ P + P T+S+K
Sbjct: 763 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 797
>AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in germ
line developmentprotein 2, isoform c protein.
Length = 1036
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 16 LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSKK 120
+D + N+N +DG TK+ P + P T+S+K
Sbjct: 992 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 1026
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in germ
line developmentprotein 2, isoform a protein.
Length = 1113
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 16 LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSKK 120
+D + N+N +DG TK+ P + P T+S+K
Sbjct: 1069 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 1103
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 7 EEELDTQVGNTNPNEDGELTKKIPKKKPPRVEDTR-SKKEHVNVVFIGHVDAGKSTIGGQ 183
E E + + + L+K IPKKKP R + + H+ + +D K G
Sbjct: 436 EAEREKEKAKDREKKIAALSKPIPKKKPETTNSLRQANRTHMETAVVARIDRMKLK-GID 494
Query: 184 IMSLTGMVDKRTLEKYEREAREKSENHGTYHGHWTQ 291
+ +VD+ LE+ + +++ +H Y W Q
Sbjct: 495 RKEMKDLVDQ--LEEMLFDKCDRNISHPKYR-VWKQ 527
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMV 207
K+ N+ I HVD GKST+ ++S G++
Sbjct: 16 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 46
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMV 207
K+ N+ I HVD GKST+ ++S G++
Sbjct: 16 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 46
>AC006695-8|AAF39976.1| 351|Caenorhabditis elegans Hypothetical
protein W06H8.4 protein.
Length = 351
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 174 NSRLSCIYMSYKYYIYMFFFASCIF 100
N L +Y+SY + ++ F FAS +F
Sbjct: 223 NPELCSVYLSYYHVVFSFTFASLLF 247
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,069,405
Number of Sequences: 27780
Number of extensions: 323236
Number of successful extensions: 1349
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1349
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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