Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20013
(724 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 143 9e-35
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 100 1e-21
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 87 8e-18
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 87 8e-18
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 87 8e-18
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 87 8e-18
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 64 1e-10
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 60 1e-09
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 38 0.005
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 36 0.036
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 36 0.036
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 35 0.063
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 35 0.063
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 34 0.083
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 34 0.083
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 34 0.11
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 34 0.11
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 34 0.11
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 33 0.14
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 33 0.25
At2g29880.1 68415.m03628 hypothetical protein 33 0.25
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 32 0.33
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 32 0.33
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 32 0.33
At5g37570.1 68418.m04526 pentatricopeptide (PPR) repeat-containi... 32 0.44
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 31 0.58
At5g13650.2 68418.m01585 elongation factor family protein contai... 31 1.0
At5g13650.1 68418.m01584 elongation factor family protein contai... 31 1.0
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 30 1.8
At4g16835.1 68417.m02541 pentatricopeptide (PPR) repeat-containi... 29 3.1
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 29 3.1
At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related conta... 29 4.1
At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related conta... 29 4.1
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 29 4.1
At4g38410.1 68417.m05429 dehydrin, putative similar to dehydrin ... 28 5.5
At3g56990.1 68416.m06344 glycine-rich protein conserved hypothet... 28 5.5
At2g47860.2 68415.m05974 phototropic-responsive NPH3 family prot... 28 7.2
At2g47860.1 68415.m05973 phototropic-responsive NPH3 family prot... 28 7.2
At4g28070.1 68417.m04026 AFG1-like ATPase family protein contain... 27 9.5
At1g63220.1 68414.m07146 C2 domain-containing protein similar to... 27 9.5
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 143 bits (347), Expect = 9e-35
Identities = 63/82 (76%), Positives = 75/82 (91%)
Frame = +3
Query: 264 WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAV 443
WY+++ +DTN+EER KGKTVEVGRA+FETE FTILDAPGHKS+VPNMI GA+QAD+ V
Sbjct: 148 WYMAYIMDTNEEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGV 207
Query: 444 LVISARKGEFETGFDRGGQTRD 509
LVISARKGEFETG++RGGQTR+
Sbjct: 208 LVISARKGEFETGYERGGQTRE 229
Score = 82.6 bits (195), Expect = 2e-16
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +1
Query: 4 HEEELDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQ 183
H+E + V N ++ +K K++ V + +KK H+NVVFIGHVDAGKSTIGGQ
Sbjct: 62 HDEVMLHPVHNPAKAKEKAAQEKAAKEEAEDVAEA-NKKRHLNVVFIGHVDAGKSTIGGQ 120
Query: 184 IMSLTGMVDKRTLEKYEREAREKS 255
I+ L+G VD R ++KYE+EA++KS
Sbjct: 121 ILFLSGQVDDRQIQKYEKEAKDKS 144
Score = 66.1 bits (154), Expect = 2e-11
Identities = 26/44 (59%), Positives = 35/44 (79%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLK 640
H LAKT GV L+ +VNKMDDPTVNW ++RY+E +K++P+LK
Sbjct: 230 HVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLK 273
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 646 GFNTAKDLSFLPVSGQTGQ 702
G+NT KD+ FLP+SG G+
Sbjct: 276 GYNTKKDVVFLPISGLMGK 294
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 100 bits (239), Expect = 1e-21
Identities = 46/80 (57%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+WALD + EER++G T+ V AYF +++ H +LD+PGHK FVPNMI GA QAD A+LVI
Sbjct: 289 AWALDESAEERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVI 348
Query: 453 SARKGEFETGFDR-GGQTRD 509
A G FE GFD GQTR+
Sbjct: 349 DASVGAFEAGFDNLKGQTRE 368
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +1
Query: 28 VGNTNPNEDGELT--KKIPKKKPPR---VEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMS 192
+G T + D ++ K K KP ++ +N+ +GHVD+GKST+ G+++
Sbjct: 202 IGETENSSDIKIRGPKSQSKHKPEEWMLLDKESDALSQLNLAIVGHVDSGKSTLSGRLLH 261
Query: 193 LTGMVDKRTLEKYEREAREKSENHGTYHGHWTQIKKNETKAK 318
L G + ++ + KYE+EA K + G++ W + E + +
Sbjct: 262 LLGRISQKQMHKYEKEA--KLQGKGSFAYAWALDESAEERER 301
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 87.4 bits (207), Expect = 8e-18
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G +QAD AVL+I
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Query: 453 SARKGEFETGFDRGGQTRD 509
+ G FE G + GQTR+
Sbjct: 117 DSTTGGFEAGISKDGQTRE 135
Score = 57.6 bits (133), Expect = 8e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+N+V IGHVD+GKST G ++ G +DKR +E++E+EA E ++ Y
Sbjct: 4 EKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY 56
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLK 640
HA+LA T GVK ++ NKMD T + + RY+E +++ YLK
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 87.4 bits (207), Expect = 8e-18
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G +QAD AVL+I
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Query: 453 SARKGEFETGFDRGGQTRD 509
+ G FE G + GQTR+
Sbjct: 117 DSTTGGFEAGISKDGQTRE 135
Score = 57.6 bits (133), Expect = 8e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+N+V IGHVD+GKST G ++ G +DKR +E++E+EA E ++ Y
Sbjct: 4 EKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY 56
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLK 640
HA+LA T GVK ++ NKMD T + + RY+E +++ YLK
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 87.4 bits (207), Expect = 8e-18
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G +QAD AVL+I
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Query: 453 SARKGEFETGFDRGGQTRD 509
+ G FE G + GQTR+
Sbjct: 117 DSTTGGFEAGISKDGQTRE 135
Score = 57.6 bits (133), Expect = 8e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+N+V IGHVD+GKST G ++ G +DKR +E++E+EA E ++ Y
Sbjct: 4 EKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY 56
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLK 640
HA+LA T GVK ++ NKMD T + + RY+E +++ YLK
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 87.4 bits (207), Expect = 8e-18
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +3
Query: 273 SWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
+W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G +QAD AVL+I
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
Query: 453 SARKGEFETGFDRGGQTRD 509
+ G FE G + GQTR+
Sbjct: 117 DSTTGGFEAGISKDGQTRE 135
Score = 57.6 bits (133), Expect = 8e-09
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSENHGTY 273
+K H+N+V IGHVD+GKST G ++ G +DKR +E++E+EA E ++ Y
Sbjct: 4 EKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY 56
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 509 HAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECREKILPYLK 640
HA+LA T GVK ++ NKMD T + + RY+E +++ YLK
Sbjct: 136 HALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLK 179
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D EER +G T+ +ETE +H+ +D PGH +V NMI GAAQ D A+LV+S
Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176
Query: 462 KG 467
G
Sbjct: 177 DG 178
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 115 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYE 234
KK HVN+ IGHVD GK+T+ + + +KY+
Sbjct: 76 KKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYD 115
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 60.1 bits (139), Expect = 1e-09
Identities = 26/62 (41%), Positives = 37/62 (59%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D EE+ +G T+ +ET K+H+ +D PGH +V NMI GAAQ D +LV+S
Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGP 164
Query: 462 KG 467
G
Sbjct: 165 DG 166
Score = 31.1 bits (67), Expect = 0.77
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 118 KEHVNVVFIGHVDAGKSTIGGQI 186
K HVNV IGHVD GK+T+ I
Sbjct: 65 KPHVNVGTIGHVDHGKTTLTAAI 87
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +1
Query: 85 KPPRVEDTRSKKEHV-NVVFIGHVDAGKSTIGGQIMSLTGMVDK-----RTLEKYERE 240
K P ++ T+ E + N I H+D GKST+ ++M LTG + K + L+K +RE
Sbjct: 52 KEPTIDLTKFPSEKIRNFSIIAHIDHGKSTLADRLMELTGTIKKGHGQPQYLDKLQRE 109
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 35.5 bits (78), Expect = 0.036
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 348 TEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARK 464
T ++H + +D PGH + M+ GAA D A+L+I+A +
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANE 162
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 58 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 228
+LTK K P + S++ +N+ IGHV GKSTI I + + K LE+
Sbjct: 17 DLTKLDVTKLHPLFPEVISRQATINIGTIGHVAHGKSTIVKAISGVQTVRFKNELER 73
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 35.5 bits (78), Expect = 0.036
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 348 TEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARK 464
T ++H + +D PGH + M+ GAA D A+L+I+A +
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANE 162
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 58 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 228
+LTK K P + S++ +N+ IGHV GKSTI I + + K LE+
Sbjct: 17 DLTKLDVTKLHPLFPEVISRQATINIGTIGHVAHGKSTIVKAISGVQTVRFKNELER 73
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 34.7 bits (76), Expect = 0.063
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +3
Query: 366 TILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
T LD PGH +F GAA D+ VLV++A G
Sbjct: 271 TFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 34.7 bits (76), Expect = 0.063
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 357 KHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARK 464
+H + +D PGH + M+ GAA D A+L+I+A +
Sbjct: 119 RHVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE 154
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 58 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 228
+L+K + P + S++ +N+ IGHV GKSTI + + + K LE+
Sbjct: 11 DLSKLDVAQLHPLSPEVISRQATINIGTIGHVAHGKSTIVKAVSGVHTVKFKSELER 67
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.3 bits (75), Expect = 0.083
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +3
Query: 285 DTNQEERDKG---KTVEVGRAYFETEKKHF--TILDAPGHKSFVPNMIGGAAQADLAVLV 449
DT +E+++ K V + ++ K + I+D PGH +F M AD AVL+
Sbjct: 180 DTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLI 239
Query: 450 ISARKG 467
+ A +G
Sbjct: 240 VDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.3 bits (75), Expect = 0.083
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +3
Query: 285 DTNQEERDKG---KTVEVGRAYFETEKKHF--TILDAPGHKSFVPNMIGGAAQADLAVLV 449
DT +E+++ K V + ++ K + I+D PGH +F M AD AVL+
Sbjct: 180 DTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLI 239
Query: 450 ISARKG 467
+ A +G
Sbjct: 240 VDAAEG 245
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D+ ER+KG T++ Y + I+D PGH F + D A+LV+ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 462 KG 467
G
Sbjct: 168 GG 169
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = +1
Query: 55 GELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMV 207
G + + +K P +++ K ++ + H+D+GK+T+ +++ TG +
Sbjct: 44 GTAARAVKDEKEPWWKESMDKLRNIGIS--AHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D+ ER+KG T++ Y + I+D PGH F + D A+LV+ +
Sbjct: 108 MDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSV 167
Query: 462 KG 467
G
Sbjct: 168 GG 169
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 357 KHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARK 464
+H + +D PGH + M+ GAA D A+L+I+A +
Sbjct: 121 RHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE 156
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 91 PRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 228
P + S++ +N+ IGHV GKST+ I + + K LE+
Sbjct: 22 PLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELER 67
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 369 ILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
++D PGH+SF G++ DLA+LV+ + G
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVVDIKHG 737
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 130 NVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEK 228
N I H+D GKST+ +++ +TG V R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
Score = 31.1 bits (67), Expect = 0.77
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRA----YFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLV 449
LD ER++G T+++ A +E ++D PGH F + A + A+LV
Sbjct: 123 LDNMDLERERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLV 182
Query: 450 ISARKG 467
+ A +G
Sbjct: 183 VDASQG 188
>At2g29880.1 68415.m03628 hypothetical protein
Length = 308
Score = 32.7 bits (71), Expect = 0.25
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Frame = +1
Query: 7 EEELDTQVG-NTNPNE--DGELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIG 177
EEE D Q G N N E D E+ + +PK+K P + +++ + I H ++ + +
Sbjct: 166 EEEDDLQAGDNVNHMEINDDEVNETLPKEKLPTRKRSKTNRNGDRSDSINHGESSEKVLS 225
Query: 178 GQIMSLTGMVD--KRTLEKYEREAREKSENHGTYHGHWTQIKK 300
I T +++ ++ E+++RE E E + W IK+
Sbjct: 226 EMIGVGTNIINLIQQREERHQREV-EFRETEKKKNNVWDAIKE 267
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 369 ILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
++D PGH+SF G++ DLA+LV+ G
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVVDITHG 145
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 369 ILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
++D PGH+SF G++ DLA+LV+ G
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVVDIMHG 804
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 369 ILDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
++D PGH+SF G+ DLA+LV+ +G
Sbjct: 560 VIDTPGHESFTNLRSRGSNLCDLAILVVDIMRG 592
>At5g37570.1 68418.m04526 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 550
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 309 KGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMI 413
+ + VE G YFE +K ++IL +P H S + N++
Sbjct: 418 QSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLL 452
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 372 LDAPGHKSFVPNMIGGAAQADLAVLVISARKG 467
LD PGH++F GA D+A++V++A G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D+N ER++G T+ + I+D PGH F + D +LV+ +
Sbjct: 121 MDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSV 180
Query: 462 KG 467
+G
Sbjct: 181 EG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D+N ER++G T+ + I+D PGH F + D +LV+ +
Sbjct: 120 MDSNDLERERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSV 179
Query: 462 KG 467
+G
Sbjct: 180 EG 181
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +3
Query: 285 DTNQEERDKG---KTVEVGRAYFETEKKHF--TILDAPGHKSFVPNMIGGAAQADLAVLV 449
DT +E+++ K V + ++ K + I+D PG+ +F M AD AV +
Sbjct: 166 DTRVDEQERNISIKAVPMSLVLEDSRSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFI 225
Query: 450 ISARKG 467
+ A +G
Sbjct: 226 VDAAQG 231
>At4g16835.1 68417.m02541 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 575
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +3
Query: 321 VEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVI 452
V +G AYFE+ + + + P H + + +++G A + + A+ +I
Sbjct: 315 VNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLI 358
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISAR 461
+D EE+ + T++ + + ++D+PGH F + A +D A++++ A
Sbjct: 49 MDYLDEEQRRAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAV 108
Query: 462 KG 467
+G
Sbjct: 109 EG 110
>At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 698
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Frame = +1
Query: 109 RSKKEHVNVVFIGHVDAGKSTIG---GQIMSLTGMVDKRTLEKYEREAREKSEN----HG 267
R +KE V V+ G GKST+ G + +T +V ++ R ++ +N
Sbjct: 134 RERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVVSTDSIRHMMRSFADEKQNPLLWAS 193
Query: 268 TYHG--HWTQIKKNETKAKQ 321
TYH + + E+KAK+
Sbjct: 194 TYHAGEYLDPVAVAESKAKR 213
>At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 717
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Frame = +1
Query: 109 RSKKEHVNVVFIGHVDAGKSTIG---GQIMSLTGMVDKRTLEKYEREAREKSEN----HG 267
R +KE V V+ G GKST+ G + +T +V ++ R ++ +N
Sbjct: 153 RERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVVSTDSIRHMMRSFADEKQNPLLWAS 212
Query: 268 TYHG--HWTQIKKNETKAKQ 321
TYH + + E+KAK+
Sbjct: 213 TYHAGEYLDPVAVAESKAKR 232
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 118 KEHVNVVFIGHVDAGKSTIGGQIMSLTG 201
K++ N+ + H+DAGK+T +I+ TG
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +3
Query: 282 LDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSF 398
+D ++E+++G T+ +K I+D PGH F
Sbjct: 136 MDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDF 174
>At4g38410.1 68417.m05429 dehydrin, putative similar to dehydrin
ERD10 (Low-temperature-induced protein LTI45)
[Arabidopsis thaliana] SWISS-PROT:P42759
Length = 163
Score = 28.3 bits (60), Expect = 5.5
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Frame = +1
Query: 19 DTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLT 198
D+ + E+GE +K KKK V + + + E IGH D + +I
Sbjct: 62 DSSSSDEEAGENGEKKEKKKKKKKNEVAEDQCETEEKIPAGIGHEDGKEKGFMEKIKDKL 121
Query: 199 --GMVDKRTLEKYEREAREK---SENHGTYHGHWTQIKKNET 309
G K E + +A+EK + GH KK ET
Sbjct: 122 PGGHNGKPEAEPHNDKAKEKGFMEKIKEKLPGHTNDEKKKET 163
>At3g56990.1 68416.m06344 glycine-rich protein conserved
hypothetical protein SPCC330.09 - Schizosaccharomyces
pombe, PIR:T41319
Length = 711
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 49 EDGELTKKIPKKKPPRVED 105
EDGE TKK+ KKK P + D
Sbjct: 478 EDGEATKKVLKKKKPILTD 496
>At2g47860.2 68415.m05974 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 517
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 66 KKDSKEKTTTSRRYTKQKRTC 128
KK ++EKT + RR+ QKR C
Sbjct: 493 KKHTEEKTNSERRFMFQKRRC 513
>At2g47860.1 68415.m05973 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 635
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 66 KKDSKEKTTTSRRYTKQKRTC 128
KK ++EKT + RR+ QKR C
Sbjct: 611 KKHTEEKTNSERRFMFQKRRC 631
>At4g28070.1 68417.m04026 AFG1-like ATPase family protein contains
Pfam profile: PF03969 AFG1-like ATPase
Length = 464
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 467 AFTCRNDQYSEVSLSSPTNHVWNKTFVS 384
A CR D+YS + S+ +N WNK FVS
Sbjct: 100 ADACRLDRYSASAKSTRSNWFWNK-FVS 126
>At1g63220.1 68414.m07146 C2 domain-containing protein similar to
phloem protein RPP16 [Oryza sativa (japonica
cultivar-group)] GI:21998839; contains Pfam profile
PF00168: C2 domain
Length = 147
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = -3
Query: 461 TCRN-DQYSEVSLSSPTNHVWNKTF---VSRGIKNCKMLLFSLKISSSN 327
TCR DQ S V+ T WN+TF VS G K +F + + +
Sbjct: 32 TCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTED 80
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,008,715
Number of Sequences: 28952
Number of extensions: 294123
Number of successful extensions: 1159
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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