Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20009
(710 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 154 1e-38
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 138 5e-34
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 136 3e-33
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 121 9e-29
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 110 2e-25
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 96 5e-21
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 84 2e-17
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 57 2e-09
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 31 0.12
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 2.6
SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces pomb... 27 3.5
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 3.5
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.5
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.6
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 6.1
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 8.1
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 25 8.1
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 154 bits (374), Expect = 1e-38
Identities = 71/101 (70%), Positives = 79/101 (78%)
Frame = +1
Query: 226 GLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNG 405
G F P FMLQGGDFT NGTGGKSIYG KF DENF LKH PG+LSMANAG +TNG
Sbjct: 48 GSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNG 107
Query: 406 SQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLG 528
SQFFITTV T WLDG+HVVFG V EGM+VVK++E+L + G
Sbjct: 108 SQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSG 148
Score = 82.2 bits (194), Expect = 7e-17
Identities = 36/52 (69%), Positives = 40/52 (76%)
Frame = +2
Query: 98 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIP 253
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIP 56
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 513 GSHSGKTSKRIVIKDCGQI 569
GS+SG T RIVI CG +
Sbjct: 144 GSNSGATRARIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 138 bits (335), Expect = 5e-34
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = +1
Query: 223 QGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 402
+G F P+FM+QGGD T +GTGGKSIYG++F DENF L H PG+LSMANAG D+N
Sbjct: 72 EGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSN 131
Query: 403 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 504
GSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 132 GSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
Score = 76.6 bits (180), Expect = 3e-15
Identities = 36/62 (58%), Positives = 41/62 (66%)
Frame = +2
Query: 68 NTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRV 247
N G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHRV
Sbjct: 20 NRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRV 79
Query: 248 IP 253
IP
Sbjct: 80 IP 81
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 136 bits (329), Expect = 3e-33
Identities = 65/100 (65%), Positives = 74/100 (74%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F +FMLQGGDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG
Sbjct: 49 LTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGP 108
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETL 513
+TNGSQFFITTV T LDG+HVVFG V++G V+ IE L
Sbjct: 109 NTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENL 148
Score = 44.8 bits (101), Expect = 1e-05
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Frame = +2
Query: 98 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVI 250
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVI 60
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 121 bits (292), Expect = 9e-29
Identities = 54/86 (62%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVK 432
FM+QGGDF + +GTG +I+ ++ F DENFTLKH PG+LSMANAG D+NG QFFITTV
Sbjct: 67 FMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVP 126
Query: 433 TSWLDGRHVVFGNVVEGMEVVKQIET 510
+LDG+HVVFG V+EG ++VK+IE+
Sbjct: 127 CDFLDGKHVVFGEVIEGYDIVKEIES 152
Score = 62.5 bits (145), Expect = 6e-11
Identities = 31/60 (51%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Frame = +2
Query: 89 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 250
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 110 bits (264), Expect = 2e-25
Identities = 53/94 (56%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
Frame = +1
Query: 226 GLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTN 402
G+ F P F++QGGD T G GG SIYG+KF+DE + L HTG G+LSMANAG +TN
Sbjct: 40 GVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTN 98
Query: 403 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 504
SQFFIT T WLDG+H +FG VV G+ V K++
Sbjct: 99 SSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132
Score = 50.0 bits (114), Expect = 3e-07
Identities = 29/58 (50%), Positives = 37/58 (63%)
Frame = +2
Query: 128 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPTITALG 301
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP +G PT T G
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTL--AKEGY-YDGVIFHRVIP-DFVIQGGDPTGTGRG 63
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 95.9 bits (228), Expect = 5e-21
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 HFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTV 429
+FM+QGGD +GTGG+SI+ FEDE + LKH P +SMAN+G +TNGSQFFITT
Sbjct: 502 NFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTD 560
Query: 430 KTSWLDGRHVVFGNVVEGMEVVKQIE 507
T WLDG+H +F G++VV +IE
Sbjct: 561 LTPWLDGKHTIFARAYAGLDVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 83.8 bits (198), Expect = 2e-17
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVK 432
FM+QGGD + G GG+SI+G F+DE LKH G++SMAN G +TNGSQFFI
Sbjct: 324 FMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGP 382
Query: 433 TSWLDGRHVVFGNVVEGMEVVKQIE 507
LD +H +FG VV G+ V+ +E
Sbjct: 383 AKHLDNKHTIFGRVVGGLNVLDALE 407
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 57.2 bits (132), Expect = 2e-09
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 250 PHFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITT 426
P F++QGGD T G GG+SIYG F E L+ G++ MA + N SQFFIT
Sbjct: 59 PEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITL 117
Query: 427 VKTSWLDGRHVVFGNVV 477
T +G+ +FG VV
Sbjct: 118 GPTPEWNGKQTLFGRVV 134
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = +2
Query: 131 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPTITALG 301
G I IEL PK C NF LC +G+ Y G+I HRV+P +G PT T +G
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVP-EFLIQGGDPTGTGMG 74
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 31.5 bits (68), Expect = 0.12
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 119 DAPLGKIVIELRSDVTPKTCENFRALC 199
+ +G +VI+L PKTCENF LC
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC 32
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 2.6
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 107 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 202
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPBC21B10.09 |||acetyl-CoA transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 519
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/67 (22%), Positives = 30/67 (44%)
Frame = +2
Query: 155 SDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPTITALGESPSTAISLKT 334
+D K C+ C ++ Y SI + IS C +P + L ++P ++ + +
Sbjct: 453 ADAQKKECQALGGTCLYKRDGYYLTSIVGIFLAISICVSLITPVVRRLTKAPISSWHIHS 512
Query: 335 RISPLST 355
+I+ T
Sbjct: 513 KIAETYT 519
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 266 KEGTSPTITALGESPSTAISLKTRISPLSTLDLASS 373
KE +P+ITA SP +A S + ISP + + +S
Sbjct: 334 KEKNTPSITAKAGSPQSAPSKASYISPYARPGITTS 369
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 402 WFPVLHHHC 428
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 497 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 348
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 6.1
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 274 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 420
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 8.1
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = -3
Query: 486 HAFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLKG------EILVFK 325
H N P + P +S EL + IS+G+DA S VLK E++V +
Sbjct: 228 HELNESPSTPTAPDFPH-YNSSPSELSPTQRRSSISNGKDAPSPVLKDLTSYTQEVIVCR 286
Query: 324 LIAVDGLSPS 295
LSPS
Sbjct: 287 KFLHHSLSPS 296
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 25.4 bits (53), Expect = 8.1
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 140 VIELRSDVTPKTCENFRALCTGEKGFGYKG-SIFHRVIPISCCKEGTSPTITALGESPST 316
++++ +D K E +A T G K SI+H+VI KE I L ++PS
Sbjct: 675 LLQIHADKMLKMSEVEKANWTLPSNLGGKSVSIYHKVIKKVYGKEHAQQIIENLQKNPSV 734
Query: 317 AISL 328
I +
Sbjct: 735 TIPI 738
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,194,391
Number of Sequences: 5004
Number of extensions: 70823
Number of successful extensions: 252
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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