Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20009
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 150 9e-37
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 148 4e-36
09_06_0359 + 22508900-22509439 146 1e-35
02_01_0160 + 1116160-1116678 143 1e-34
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 128 6e-30
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 127 1e-29
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 126 1e-29
10_01_0309 + 3417602-3418147 120 9e-28
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 114 6e-26
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 110 1e-24
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 109 2e-24
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 109 2e-24
06_01_0214 + 1634171-1634173,1634263-1634742 93 2e-19
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 88 7e-18
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 84 9e-17
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 71 1e-12
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 69 5e-12
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 66 2e-11
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 61 1e-09
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 58 7e-09
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 48 6e-06
02_01_0086 + 613113-613532 45 5e-05
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 38 0.008
10_01_0310 + 3425099-3425218 37 0.018
08_02_0053 + 11721658-11721689,11721960-11722710 37 0.018
01_01_0077 - 585670-585787,585921-586687 37 0.018
03_05_0695 - 26851370-26851495,26852949-26853398 31 1.2
12_02_1032 + 25542420-25542573,25543511-25543577,25543816-255439... 30 2.1
11_01_0361 + 2772193-2772334,2773457-2773587,2773872-2773985,277... 29 3.6
07_03_1767 + 29338867-29338912,29339261-29339325,29339571-293396... 29 3.6
05_02_0115 - 6758540-6758771,6759417-6759524,6759670-6759840,675... 29 3.6
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 29 4.8
06_01_0719 + 5239238-5239635,5239735-5239945,5240379-5240454,524... 28 6.4
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11... 28 6.4
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 150 bits (364), Expect = 9e-37
Identities = 70/107 (65%), Positives = 80/107 (74%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F P FM+QGGDFT +G GG+SIYG KF DENF +KHTGPG+LSMANAG
Sbjct: 100 LHFKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLLSMANAGR 159
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGRP 534
DTNGSQFFITTV TSWLDG+HVVFG V+ GM+VV +IE G P
Sbjct: 160 DTNGSQFFITTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGQQSGSP 206
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/61 (54%), Positives = 41/61 (67%), Gaps = 7/61 (11%)
Frame = +2
Query: 92 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 250
+V+FDV +D P G++V+ L PKT ENFRALCTGEKG G +KGS FHR+I
Sbjct: 52 KVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRII 111
Query: 251 P 253
P
Sbjct: 112 P 112
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 148 bits (359), Expect = 4e-36
Identities = 70/108 (64%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
Frame = +1
Query: 223 QGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 402
+G F FM+QGGDF NGTGGKSIYG F+DENF L HTGPGV+SMANAG +TN
Sbjct: 131 KGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTN 190
Query: 403 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLG-RPLRE 543
GSQFFI TVKT WLDGRHVVFG V+EGM++VK IE+ G RP ++
Sbjct: 191 GSQFFICTVKTPWLDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKK 238
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/56 (58%), Positives = 43/56 (76%), Gaps = 3/56 (5%)
Frame = +2
Query: 92 RVFFDVTVDDAP---LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVI 250
+V+FD+++ + +G++VI L D P+T ENFRALCTGEKGFGYKGS FHRVI
Sbjct: 84 KVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVI 139
>09_06_0359 + 22508900-22509439
Length = 179
Score = 146 bits (355), Expect = 1e-35
Identities = 66/105 (62%), Positives = 82/105 (78%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F P+FM QGGDFT NGTGG+SIYG++F DENF L+HTGPGVLSMANAG
Sbjct: 55 LHYKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGP 114
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLG 528
+TNGSQFFI T +T+WLDG+HVVFG VV+G VV+++E + + G
Sbjct: 115 NTNGSQFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSG 159
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/69 (53%), Positives = 46/69 (66%), Gaps = 7/69 (10%)
Frame = +2
Query: 89 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 247
P+VFFD+ + A G++V+EL +D PKT ENFR LCTGEKG G YKGS FHR+
Sbjct: 6 PKVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRI 65
Query: 248 IPISCCKEG 274
IP C+ G
Sbjct: 66 IPNFMCQGG 74
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +3
Query: 513 GSHSGKTSKRIVIKDCGQIA 572
GS SG T++R++I+DCGQ+A
Sbjct: 155 GSGSGGTAERVLIEDCGQLA 174
>02_01_0160 + 1116160-1116678
Length = 172
Score = 143 bits (347), Expect = 1e-34
Identities = 68/105 (64%), Positives = 76/105 (72%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F P FM QGGDFT NGTGG+SIYG KF DE F KH PG+LSMANAG
Sbjct: 53 LHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGP 112
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLG 528
+TNGSQFFI TV SWLDG+HVVFG VVEGM+VVK IE + + G
Sbjct: 113 NTNGSQFFICTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGG 157
Score = 83.0 bits (196), Expect = 2e-16
Identities = 43/72 (59%), Positives = 49/72 (68%), Gaps = 7/72 (9%)
Frame = +2
Query: 80 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 238
MS RVFFD+TV AP G+IV+EL + P+T ENFRALCTGEKG G YKGS F
Sbjct: 1 MSNTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTF 60
Query: 239 HRVIPISCCKEG 274
HRVIP C+ G
Sbjct: 61 HRVIPEFMCQGG 72
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 513 GSHSGKTSKRIVIKDCGQIA 572
GS G T+K +VI DCGQ++
Sbjct: 153 GSRGGSTAKPVVIADCGQLS 172
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 128 bits (308), Expect = 6e-30
Identities = 60/96 (62%), Positives = 73/96 (76%)
Frame = +1
Query: 220 LQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 399
+QG F FM+QGGD T +GTGG+SIYG KFEDENF LKH G+LSMAN+G +T
Sbjct: 117 VQGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGMLSMANSGPNT 176
Query: 400 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 507
NGSQFFITT +T LDG+HVVFG V++GM VV+ +E
Sbjct: 177 NGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVE 212
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = +2
Query: 89 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG 220
PR F DV++ G+IVIEL + V P+T ENFRALCTGEKG G
Sbjct: 26 PRCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVG 69
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 127 bits (306), Expect = 1e-29
Identities = 58/84 (69%), Positives = 68/84 (80%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 435
FM+QGGD T +GTGG+SIYG FEDENF LKH G+LSMANAG DTNGSQFFITT +T
Sbjct: 111 FMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITTTRT 170
Query: 436 SWLDGRHVVFGNVVEGMEVVKQIE 507
LDG+HVVFG V++GM VV+ +E
Sbjct: 171 PHLDGKHVVFGRVIKGMGVVRSME 194
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 89 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG 214
PR + DV++ G+IV+EL + V P+T ENFRALCTGEKG
Sbjct: 33 PRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKG 74
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 126 bits (305), Expect = 1e-29
Identities = 61/107 (57%), Positives = 73/107 (68%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F P FM+QGGD + NGTG SIYG F DENF + H+ PG+LSMAN
Sbjct: 89 LSYKGTPFHRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANYAK 148
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGRP 534
DTNGSQFFITTVK + LDG+HVVFG V+ GM+VV +IE + G P
Sbjct: 149 DTNGSQFFITTVKLTRLDGKHVVFGKVLSGMDVVYKIEAEGSQSGTP 195
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 7/61 (11%)
Frame = +2
Query: 92 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 250
+VFFD+T++ P G+IV+ L + PKT ENFRA+CTGEKG G YKG+ FHR+I
Sbjct: 41 KVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHRII 100
Query: 251 P 253
P
Sbjct: 101 P 101
>10_01_0309 + 3417602-3418147
Length = 181
Score = 120 bits (290), Expect = 9e-28
Identities = 60/115 (52%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Frame = +1
Query: 205 RERLRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIY---GNKFEDENFTLKHTGPGVLS 375
+ RL +G F P FM QGGD T NGTGG+S F DE F +KH GPGV+S
Sbjct: 57 KSRLHYKGSAFHRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVS 116
Query: 376 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGRPLR 540
MANAG +TNGSQFFIT K WLDGRHV FG VV GM V+ I+ G+ ++
Sbjct: 117 MANAGPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVK 171
Score = 68.1 bits (159), Expect = 6e-12
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Frame = +2
Query: 83 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFH 241
S PRVF D+ + +G++VIEL +D P T ENFR LCTGE+ YKGS FH
Sbjct: 9 SNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFH 68
Query: 242 RVIPISCCKEG 274
RV+P C+ G
Sbjct: 69 RVVPGFMCQGG 79
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 114 bits (275), Expect = 6e-26
Identities = 53/72 (73%), Positives = 58/72 (80%)
Frame = +1
Query: 223 QGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 402
+G F FM+QGGDF N+NGTGG+SIYG F+DENFTLKHTGPGVLSMANAG DTN
Sbjct: 111 KGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYGECFDDENFTLKHTGPGVLSMANAGPDTN 170
Query: 403 GSQFFITTVKTS 438
GSQFFI TVK S
Sbjct: 171 GSQFFICTVKFS 182
Score = 76.6 bits (180), Expect = 2e-14
Identities = 33/53 (62%), Positives = 40/53 (75%)
Frame = +2
Query: 92 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVI 250
+ FFDV V P G+IVI L +V PKT +NFRALCTG+KG+GYKG FHR+I
Sbjct: 67 KCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRII 119
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 110 bits (264), Expect = 1e-24
Identities = 58/107 (54%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 432
F++QGGD T G GG+SIYG KFEDE LKHTG G+LSMANAG +TNGSQFFIT
Sbjct: 58 FIVQGGDPTG-TGRGGESIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAP 116
Query: 433 TSWLDGRHVVFGNVVEGMEVVKQIETLAATLG-RPLRE-SLSKTVVR 567
LDG+H +FG V +GME+VK++ ++ RP+ E + +TVV+
Sbjct: 117 CQSLDGKHTIFGRVSKGMEIVKRLGSVQTDKSDRPIHEVKILRTVVK 163
Score = 36.7 bits (81), Expect = 0.018
Identities = 26/81 (32%), Positives = 37/81 (45%)
Frame = +2
Query: 104 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSP 283
+VT++ + +G IE+ PKTC NF L +G+ Y IFHR+I +G P
Sbjct: 11 EVTLETS-MGAFTIEMYYKHAPKTCRNFLEL--SRRGY-YDNVIFHRIIK-DFIVQGGDP 65
Query: 284 TITALGESPSTAISLKTRISP 346
T T G + I P
Sbjct: 66 TGTGRGGESIYGAKFEDEIRP 86
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 109 bits (263), Expect = 2e-24
Identities = 54/85 (63%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 432
FM+Q GD +GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV
Sbjct: 544 FMIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVA 602
Query: 433 TSWLDGRHVVFGNVVEGMEVVKQIE 507
T WLD +H VFG VV+GM+VV+QIE
Sbjct: 603 TPWLDNKHTVFGRVVKGMDVVQQIE 627
Score = 32.3 bits (70), Expect = 0.39
Identities = 24/60 (40%), Positives = 28/60 (46%)
Frame = +2
Query: 71 TGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVI 250
T SLP D V +G I + L + PKT ENF C G+ Y IFHRVI
Sbjct: 489 TATTSLP----DNLVMHTSMGDIHLRLYPEECPKTVENFTTHC--RNGY-YDNLIFHRVI 541
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 109 bits (263), Expect = 2e-24
Identities = 51/84 (60%), Positives = 64/84 (76%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 435
FM QGGDF+N +G+GG+SIYG FEDENF L+H G+LSMANAG +TNGSQFFIT
Sbjct: 71 FMAQGGDFSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQFFITFKHN 130
Query: 436 SWLDGRHVVFGNVVEGMEVVKQIE 507
S LD + VFG ++ G +V+K+IE
Sbjct: 131 SRLDRKSTVFGKLILGNDVLKRIE 154
Score = 70.1 bits (164), Expect = 2e-12
Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 8/66 (12%)
Frame = +2
Query: 77 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 232
K P VF DV++ D P ++V EL +DV P+T ENFRALCTGE G G YKGS
Sbjct: 3 KKKNPIVFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGS 62
Query: 233 IFHRVI 250
+FHRVI
Sbjct: 63 LFHRVI 68
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 93.1 bits (221), Expect = 2e-19
Identities = 51/98 (52%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 432
FM+QGGD T G GG SI+G KF DE +LKH GV+SMAN+G +TNGSQFFIT K
Sbjct: 49 FMIQGGDPTG-TGKGGTSIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAK 107
Query: 433 TSWLDGRHVVFGNVVEGMEVVKQIETLAATLG-RPLRE 543
L+G + VF V+ G EV+ +E G RPL E
Sbjct: 108 QPHLNGHYTVFAKVIHGFEVLDLMEKAQTGPGDRPLAE 145
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/58 (44%), Positives = 31/58 (53%)
Frame = +2
Query: 128 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPTITALG 301
LG I E+ D P+T ENF ALC G+ Y G+IFHR I +G PT T G
Sbjct: 9 LGDIKCEVFCDQAPRTAENFLALCA--SGY-YDGTIFHRNIK-GFMIQGGDPTGTGKG 62
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 87.8 bits (208), Expect = 7e-18
Identities = 51/108 (47%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Frame = +1
Query: 226 GLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTN 402
GL F +FM+QGGD T G+GG+SI+G F+DE N L H+G GV+SMAN+G TN
Sbjct: 383 GLIFHRSIKNFMIQGGDPTG-TGSGGESIWGKPFKDELNSKLIHSGRGVVSMANSGPHTN 441
Query: 403 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAA-TLGRPLRE 543
GSQFFI L+ +H VFG VV G+ + +E + RPL E
Sbjct: 442 GSQFFILYKSAPHLNFKHTVFGMVVGGLTTLSAMEKVPVDDDDRPLEE 489
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = +2
Query: 131 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPTITALG 301
G + +EL D+TP+TCENF C E G+ Y G IFHR I + +G PT T G
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC--ENGY-YNGLIFHRSIK-NFMIQGGDPTGTGSG 406
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 84.2 bits (199), Expect = 9e-17
Identities = 49/116 (42%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +1
Query: 199 HWRERLRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 378
H + L +G F P FM+QGGD +G G V++M
Sbjct: 82 HKGKSLHYKGSRFHRIIPGFMIQGGDIVRGDGKGS---------------------VIAM 120
Query: 379 ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATL-GRPLRE 543
AN+G D+NGSQF+ITT+KTSWLDG HVVFG V++GM+ V IE A T G+P ++
Sbjct: 121 ANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKK 176
Score = 70.9 bits (166), Expect = 9e-13
Identities = 38/71 (53%), Positives = 46/71 (64%), Gaps = 11/71 (15%)
Frame = +2
Query: 74 GKMSLP----RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG------- 220
G++ LP RV+ DV +D +G+IVI L DV PKT NFRALCTGE+G G
Sbjct: 29 GEVRLPAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLH 88
Query: 221 YKGSIFHRVIP 253
YKGS FHR+IP
Sbjct: 89 YKGSRFHRIIP 99
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD-TNGSQFFITTV 429
F++QGGD T +GTGG+SIYG F DE T L+ G+++ ANAG +NGSQFFI+
Sbjct: 61 FLVQGGDPTG-SGTGGESIYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLD 119
Query: 430 KTSWLDGRHVVFGNV 474
+ WLD ++ +FG V
Sbjct: 120 RCDWLDKKNTIFGKV 134
Score = 34.7 bits (76), Expect = 0.073
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +2
Query: 131 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPTITALG 301
G + IEL PK NF LC +G+ Y G++FHRVI S +G PT + G
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIK-SFLVQGGDPTGSGTG 74
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 68.5 bits (160), Expect = 5e-12
Identities = 30/55 (54%), Positives = 37/55 (67%)
Frame = +1
Query: 223 QGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANA 387
+G F FM+QGGD+ +GTG SIYG KF+DENF KHTGPG+LSM +
Sbjct: 87 KGCQFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRS 141
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/59 (57%), Positives = 39/59 (66%), Gaps = 5/59 (8%)
Frame = +2
Query: 89 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE---KGF--GYKGSIFHRVI 250
P VFFDVT+ P G+I +EL +D+ PKT ENFR CTGE G GYKG FHRVI
Sbjct: 37 PVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVI 95
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Frame = +1
Query: 409 QFFITTVKTSWLDGRHVVFGNVV-EGMEVVKQIETLA 516
QFFIT K WLD +HVVFG V+ +GM V++IE +A
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVA 236
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 66.5 bits (155), Expect = 2e-11
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 16/134 (11%)
Frame = +1
Query: 190 CPVHWRERLRL------QGLHFPSCHPHFMLQGGDFTNHNGTGGKSIY----GNK---FE 330
CP+ + L+L G F F+ Q GD T G GG S+Y G++ F+
Sbjct: 21 CPLTTKNFLKLCKMKYYNGCLFHKVEKDFLAQTGDPTG-TGAGGDSVYKFLYGDQARFFD 79
Query: 331 DE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI 504
DE L+H+ G ++MA+AG + N SQF+IT +LD +H VFG V EG + + +I
Sbjct: 80 DEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHTVFGMVAEGFDTLTKI 139
Query: 505 -ETLAATLGRPLRE 543
ET GRP ++
Sbjct: 140 SETYVDDKGRPFKD 153
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 128 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPTITALG 301
+G I ++L +D+ P T +NF LC K Y G +FH+V + G PT T G
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLC---KMKYYNGCLFHKVEKDFLAQTG-DPTGTGAG 62
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 8/62 (12%)
Frame = +2
Query: 89 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSIFHR 244
P VFFD+ + +I EL +DV PKT ENFRALCTGE+G G +KG+ HR
Sbjct: 8 PHVFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLYFKGTNMHR 67
Query: 245 VI 250
++
Sbjct: 68 IL 69
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 427 VKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGRPLRE 543
V TS + +HVVFG VV GM ++K++E + + G+P E
Sbjct: 87 VSTSCVS-KHVVFGKVVTGMPLLKKLEAVGSDTGKPTCE 124
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 58.0 bits (134), Expect = 7e-09
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Frame = +1
Query: 325 FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK-TSWLDGRHVVFGNVVEGMEVVK 498
F+DE + L+H+ G ++MA+AG + N SQF+IT +LD +H VFG V EG + +
Sbjct: 108 FDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTIT 167
Query: 499 QI-ETLAATLGRPLRE 543
+I ET GRP ++
Sbjct: 168 KINETYVDDKGRPFKD 183
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 128 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHR 244
+G I ++L +D+ P T +NF LC G +G G F +
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLCKGNEGLVAGGLAFRK 47
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 48.4 bits (110), Expect = 6e-06
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +1
Query: 223 QGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADT 399
+G+ F +F++QGGDF + NG + I K EN + KH + + N +
Sbjct: 131 KGMPFRHVIKNFVIQGGDF-DFNGAAQEWILKAKASGENALSPKHEAFMIGTTKNP--NN 187
Query: 400 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 507
G FITT L+ + VVFG V+ G ++V++IE
Sbjct: 188 KGFDLFITTAPIPDLNDKLVVFGQVINGQDIVQEIE 223
>02_01_0086 + 613113-613532
Length = 139
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +1
Query: 331 DENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 507
+ENF L H P + N A+ N SQFF + W DG +VVFG ++ G +K IE
Sbjct: 63 NENFLLPHDRPW---LPNGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKAIE 115
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 143 IELRSDVTPKTCENFRALCTGEKGFGYKG 229
+EL +D+ P T ENFRAL T +K YKG
Sbjct: 1 MELYADLVPLTAENFRALYT-KKPLHYKG 28
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +1
Query: 343 TLKHTGPGVLSMA-NAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETL 513
T+KH G+LSM ++ ++ GS F I LDG++ VFG + +G + ++++E L
Sbjct: 156 TVKHVR-GILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLEQL 212
>10_01_0310 + 3425099-3425218
Length = 39
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 131 GKIVIELRSDVTPKTCENFRALCTG 205
G +VIE +D PKT ENFR +CTG
Sbjct: 8 GSVVIEQFADKVPKTTENFRPMCTG 32
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 116 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVI 250
D PLG+++ L + P T NF+A CT Y+G++ H+++
Sbjct: 123 DSEPLGRVIFGLYGRLLPLTTANFKAACTSA---AYRGTLVHKLL 164
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Frame = +1
Query: 340 FTLKHTGPGVLSMANAGADTNGS----------QFFITTVKTSW--LDGRHVVFGNVVEG 483
F LKH PG LS+ D + +F +TT LDG+++VFG V+EG
Sbjct: 201 FELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTTGPGPCPELDGQNIVFGTVLEG 260
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 92 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIP 253
+ F DV++ P G+I I L D P F +L T G GY+ F +++P
Sbjct: 76 KAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVT---GVGYRRKEFVKIVP 126
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 388 GADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 504
G NG++F ITT LD +V G VV+GM+V+ +I
Sbjct: 202 GVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKI 240
>03_05_0695 - 26851370-26851495,26852949-26853398
Length = 191
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 440 GWMADMLSLGMLLKAWKLSSRLRLWQPLWEDL 535
G A +LSL + W +++R+RLW+P+ E++
Sbjct: 139 GVQAKLLSLLSEISNWFINARVRLWKPMVEEM 170
>12_02_1032 +
25542420-25542573,25543511-25543577,25543816-25543918,
25544435-25544505,25544639-25544702,25545260-25545316,
25545435-25545593,25545967-25546035,25546111-25546202,
25546579-25546657,25546923-25547088,25547480-25547604,
25547737-25548078,25548271-25548432,25548520-25548624,
25548766-25548860,25548948-25549044,25549848-25550165,
25550228-25550296
Length = 797
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3
Query: 228 PL*PKPFSPVHRARKFSHVLGVTSLLSSITIFPSGASSTVTSKNTRGRDILP 73
PL P SP+ R+ H + + + +++ PS +SSTVTS G D P
Sbjct: 722 PLLLSPRSPMSELRRPLH-MPFSPVRKAVSPSPSSSSSTVTSPRNAGEDQKP 772
>11_01_0361 +
2772193-2772334,2773457-2773587,2773872-2773985,
2774303-2774459,2774577-2775000,2775238-2776030,
2776182-2776241,2776952-2777593
Length = 820
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 190 CPVHWRERLRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNK 324
CP H+ E + L+ H + + + L D NH+ + S YGNK
Sbjct: 284 CPSHFVE-INLEKQHHLNGYTNHKLNEKDIFNHSNSSAFSRYGNK 327
>07_03_1767 +
29338867-29338912,29339261-29339325,29339571-29339642,
29339913-29339956,29340047-29340158,29340879-29340950,
29341449-29341511,29341957-29342034,29342110-29342202,
29342294-29342413,29342762-29342845,29343094-29343309,
29343401-29343448,29343761-29343871,29344170-29344267,
29345004-29345248,29345764-29345832,29345919-29345983,
29346168-29346337,29346434-29346512,29346614-29346869,
29347416-29347461,29347602-29347710,29347820-29347882,
29350075-29350107,29350924-29351442
Length = 991
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -3
Query: 369 DARSSVLKGEILVFKLIAVDGLSPSAVMVGEV 274
DA +V GEIL+ ++ V G++PS V++ ++
Sbjct: 778 DAFVNVQNGEILLIEVNTVPGMTPSTVLIHQI 809
>05_02_0115 -
6758540-6758771,6759417-6759524,6759670-6759840,
6759967-6760077,6760562-6760663,6761139-6761366,
6761568-6761696,6761753-6761869,6761955-6762301,
6762377-6762931,6763104-6763182,6763429-6763595,
6763857-6764075,6764956-6765139,6765175-6765371,
6765717-6766035,6766379-6766538,6767642-6767794,
6767911-6768013
Length = 1226
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = -3
Query: 528 SQSGCQSLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVL 349
++S +SL L N + P + G+D+ DE GT SH E S
Sbjct: 566 TKSALESLPDLKNVDSVAEPPLTEQEKVVSNGMDAPDELAGTSVNLDSTSHCEGEPSRAD 625
Query: 348 KGEILVFKLIAVDGLSPSAV 289
GE+ + DG S S++
Sbjct: 626 NGELKGNLIDEEDGTSDSSL 645
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 500 CLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAM 375
C T ++P +T PK+ L +S L V M+N + S ALA+
Sbjct: 2901 CFTAALPLSTIPKS--LNNSHFALEVTMRNGKKHASLRALAI 2940
>06_01_0719 +
5239238-5239635,5239735-5239945,5240379-5240454,
5240573-5240675,5241089-5241157,5241318-5241354,
5241445-5241519,5241598-5241649,5241752-5241796,
5241994-5242080,5242348-5242445
Length = 416
Score = 28.3 bits (60), Expect = 6.4
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +3
Query: 78 KCLYHEYSSTSLLTMPHW 131
+CL+HEY+++S + +P W
Sbjct: 396 RCLFHEYNTSSQIFLPIW 413
>03_01_0014 +
113638-113754,113836-113950,114570-114835,115365-115575,
115915-115979,118723-118930,119457-119566,119663-119913,
120250-120356,120442-120509,120624-120701,121070-121198,
121341-121481,122297-122344,122648-122743,124071-124183,
124441-124591,124745-124818,124913-125072,125356-125454,
125532-125618,125761-125907
Length = 946
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 402 ISISTGISHGEDARSSVLKGEILVF 328
++I T I HG D R+S L GE LVF
Sbjct: 119 LAILTAIFHGVDPRTSFLIGEGLVF 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,305,076
Number of Sequences: 37544
Number of extensions: 502685
Number of successful extensions: 1452
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -