Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20009
(710 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 164 6e-41
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 164 6e-41
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 158 4e-39
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 156 1e-38
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 156 2e-38
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 156 2e-38
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 151 6e-37
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 150 1e-36
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 149 2e-36
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 146 1e-35
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 133 1e-31
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 133 1e-31
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 127 6e-30
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 123 1e-28
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 112 2e-25
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 111 3e-25
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 107 9e-24
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 92 3e-19
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 89 2e-18
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 87 1e-17
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 80 2e-15
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 77 9e-15
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 61 8e-10
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 43 2e-04
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 38 0.007
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 35 0.061
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.57
At4g03030.1 68417.m00411 kelch repeat-containing F-box family pr... 31 0.57
At1g06590.1 68414.m00698 expressed protein 30 1.3
At5g07880.1 68418.m00908 SNAP25 homologous protein, putative / s... 30 1.7
At4g17486.1 68417.m02616 expressed protein 29 3.0
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 29 3.0
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 29 3.0
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 29 3.0
At1g79690.1 68414.m09294 MutT/nudix family protein contains Pfam... 29 3.0
At3g59700.1 68416.m06661 lectin protein kinase, putative similar... 28 5.3
At3g08840.2 68416.m01026 D-alanine--D-alanine ligase family simi... 28 7.0
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 28 7.0
At1g33470.2 68414.m04143 RNA recognition motif (RRM)-containing ... 28 7.0
At1g33470.1 68414.m04142 RNA recognition motif (RRM)-containing ... 28 7.0
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 28 7.0
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 27 9.3
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 9.3
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 9.3
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 27 9.3
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 9.3
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 164 bits (398), Expect = 6e-41
Identities = 74/109 (67%), Positives = 88/109 (80%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F P+FM QGGDFT NGTGG+SIYG+KFEDENF KHTGPG+LSMANAGA
Sbjct: 53 LHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGA 112
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGRPLR 540
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE + ++ G+P +
Sbjct: 113 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTK 161
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 7/72 (9%)
Frame = +2
Query: 80 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 238
M+ P+V+FD+T+D P G+IV+EL +D TP+T ENFRALCTGEKG G +KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 239 HRVIPISCCKEG 274
HRVIP C+ G
Sbjct: 61 HRVIPNFMCQGG 72
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 513 GSHSGKTSKRIVIKDCGQIA 572
GS SGK +K +V+ DCGQ++
Sbjct: 153 GSSSGKPTKPVVVADCGQLS 172
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 164 bits (398), Expect = 6e-41
Identities = 74/109 (67%), Positives = 87/109 (79%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F P+FM QGGDFT NGTGG+SIYG KFEDENF KHTGPG+LSMANAGA
Sbjct: 54 LHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGA 113
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGRPLR 540
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE + ++ G+P +
Sbjct: 114 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTK 162
Score = 88.2 bits (209), Expect = 5e-18
Identities = 44/71 (61%), Positives = 51/71 (71%), Gaps = 7/71 (9%)
Frame = +2
Query: 83 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFH 241
S P+VFFD+T+ AP GKIV+EL +D TPKT ENFRALCTGEKG G +KGS FH
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
Query: 242 RVIPISCCKEG 274
RVIP C+ G
Sbjct: 63 RVIPNFMCQGG 73
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 513 GSHSGKTSKRIVIKDCGQIA 572
GS SGK +K +VI DCG+I+
Sbjct: 154 GSSSGKPTKPVVIADCGEIS 173
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 158 bits (383), Expect = 4e-39
Identities = 74/107 (69%), Positives = 82/107 (76%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F P FM+QGGDFT+ NG GG+SIYG KF DENF LKHTGPGVLSMAN+G
Sbjct: 81 LHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGE 140
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGRP 534
DTNGSQFFITTV TSWLDGRHVVFG VV+GM+VV +IE G P
Sbjct: 141 DTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTP 187
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/61 (55%), Positives = 40/61 (65%), Gaps = 7/61 (11%)
Frame = +2
Query: 92 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 250
+V+FDV +D G++VI L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 251 P 253
P
Sbjct: 93 P 93
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 156 bits (379), Expect = 1e-38
Identities = 71/107 (66%), Positives = 83/107 (77%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F P FM QGGDFT NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G
Sbjct: 53 LHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGP 112
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGRP 534
+TNGSQFFI T KTSWLDG+HVVFG VV+G VVK +E + + +G P
Sbjct: 113 NTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNP 159
Score = 79.0 bits (186), Expect = 3e-15
Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 7/72 (9%)
Frame = +2
Query: 80 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 238
M+ P+VFFD+ + G++V+EL +DVTP+T NFRALCTGE G G YKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 239 HRVIPISCCKEG 274
HR+IP C+ G
Sbjct: 61 HRIIPGFMCQGG 72
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 507 DFGSHSGKTSKRIVIKDCGQI 569
D GS G S+R+VI+DCG++
Sbjct: 151 DVGSDMGNPSERVVIEDCGEL 171
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 156 bits (378), Expect = 2e-38
Identities = 74/107 (69%), Positives = 80/107 (74%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F P FMLQGGDFT+ NG GG+SIYG KF DENF LKHTGPG LSMANAG
Sbjct: 84 LHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQ 143
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGRP 534
DTNGSQFFITTV TSWLDGRHVVFG VV GM+VV ++E G P
Sbjct: 144 DTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTP 190
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/61 (55%), Positives = 40/61 (65%), Gaps = 7/61 (11%)
Frame = +2
Query: 92 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 250
+V+FDV +D G+IV+ L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 251 P 253
P
Sbjct: 96 P 96
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 156 bits (378), Expect = 2e-38
Identities = 72/106 (67%), Positives = 83/106 (78%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F P FM QGGDFT NGTGG+SIYG+KF+DENF KHTGPG+LSMANAGA
Sbjct: 54 LHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGA 113
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGR 531
+TNGSQFFI T KTSWLDG+HVVFG VVEG+ VV+ IE + + GR
Sbjct: 114 NTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGR 159
Score = 80.6 bits (190), Expect = 9e-16
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 7/69 (10%)
Frame = +2
Query: 89 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 247
P+V+FD+TV G+IV+EL +D TP+T ENFRALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 248 IPISCCKEG 274
IP C+ G
Sbjct: 65 IPKFMCQGG 73
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 513 GSHSGKTSKRIVIKDCGQIA 572
GS SG+TSK +VI DCGQI+
Sbjct: 154 GSDSGRTSKPVVIADCGQIS 173
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 151 bits (365), Expect = 6e-37
Identities = 68/96 (70%), Positives = 79/96 (82%)
Frame = +1
Query: 223 QGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 402
+G F FM+QGGDFT NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TN
Sbjct: 140 KGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTN 199
Query: 403 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIET 510
GSQFFI TVKTSWLD +HVVFG V+EGM++V+ +E+
Sbjct: 200 GSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLES 235
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = +2
Query: 92 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVI 250
+V+FDV + G+IV+ L +V PKT ENFRALCTGEK +GYKGS FHR+I
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRII 148
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 150 bits (363), Expect = 1e-36
Identities = 70/107 (65%), Positives = 80/107 (74%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F P FM+QGGDFT +G GG+SIYG+KF DENF LKHTGPG LSMAN+G
Sbjct: 108 LYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGP 167
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGRP 534
D+NGSQFFITTV TSWLDG HVVFG V+ GMEVV++IE G P
Sbjct: 168 DSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIEAQGQDSGVP 214
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/61 (50%), Positives = 44/61 (72%), Gaps = 7/61 (11%)
Frame = +2
Query: 92 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 250
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 251 P 253
P
Sbjct: 120 P 120
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 149 bits (361), Expect = 2e-36
Identities = 69/97 (71%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 435
FM+QGGDF NGTGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KT
Sbjct: 149 FMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKT 208
Query: 436 SWLDGRHVVFGNVVEGMEVVKQIETLAATLG-RPLRE 543
SWLDGRHVVFG V+EGMEVVK IE G RP ++
Sbjct: 209 SWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKK 245
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/57 (64%), Positives = 44/57 (77%), Gaps = 4/57 (7%)
Frame = +2
Query: 92 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVI 250
+V+FD++V + P+GK IVI L D P+T ENFRALCTGEKGFGYKGS FHRVI
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 146
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 146 bits (354), Expect = 1e-35
Identities = 68/106 (64%), Positives = 81/106 (76%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F P FM QGGDFT NGTGG+SIYG KF+DENF KHTG G+LSMAN+G
Sbjct: 53 LHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGP 112
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGR 531
+TNGSQFFI T KTSWLDG+HVVFG VV+G++VVK IE + + G+
Sbjct: 113 NTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGK 158
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 7/72 (9%)
Frame = +2
Query: 80 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 238
MS PRVFFD+++ P+G+I +EL +D TP T ENFRALCTGEKG G +KGSIF
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 239 HRVIPISCCKEG 274
HRVIP C+ G
Sbjct: 61 HRVIPGFMCQGG 72
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 513 GSHSGKTSKRIVIKDCGQIA 572
GS SGKTSK + I DCGQ++
Sbjct: 153 GSDSGKTSKVVTITDCGQLS 172
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 133 bits (321), Expect = 1e-31
Identities = 63/107 (58%), Positives = 75/107 (70%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGRP 534
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E + + G+P
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKP 163
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 8/66 (12%)
Frame = +2
Query: 77 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 232
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 233 IFHRVI 250
FHRVI
Sbjct: 63 SFHRVI 68
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 133 bits (321), Expect = 1e-31
Identities = 63/107 (58%), Positives = 75/107 (70%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATLGRP 534
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E + + G+P
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKP 163
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/66 (56%), Positives = 43/66 (65%), Gaps = 8/66 (12%)
Frame = +2
Query: 77 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 232
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 233 IFHRVI 250
FHRVI
Sbjct: 63 SFHRVI 68
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 127 bits (307), Expect = 6e-30
Identities = 60/98 (61%), Positives = 74/98 (75%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F FM+QGGD + ++GTGG+SIYG KF+DENF LKH G+LSMAN+G
Sbjct: 54 LHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGP 113
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 507
+TNGSQFFITT +TS LDG+HVVFG V +GM VV+ IE
Sbjct: 114 NTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIE 151
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = +2
Query: 80 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSI 235
M + F D+++ G+IVIEL DV PKT ENFR LCTGEKG G YKG+
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60
Query: 236 FHRVI 250
FHRVI
Sbjct: 61 FHRVI 65
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 123 bits (297), Expect = 1e-28
Identities = 55/88 (62%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 435
FM+Q GDF ++G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K
Sbjct: 93 FMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKC 152
Query: 436 SWLDGRHVVFGNVV-EGMEVVKQIETLA 516
WLD +HVVFG V+ +G+ V+++IE +A
Sbjct: 153 DWLDNKHVVFGRVLGDGLLVMRKIENVA 180
Score = 64.5 bits (150), Expect = 7e-11
Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Frame = +2
Query: 89 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVI 250
P VFFDV++ P G+I +EL +D+ PKT ENFR CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVI 90
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 112 bits (270), Expect = 2e-25
Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 393
L +G F F++QGGD + +G SIYG F DENF ++H+ G+++MAN G
Sbjct: 96 LHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGP 155
Query: 394 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAATL-GRPLRE 543
D+NGSQFFITTVK SWL+G HVV G V++GM+ V IE A T G+P ++
Sbjct: 156 DSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKK 206
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/60 (58%), Positives = 39/60 (65%), Gaps = 7/60 (11%)
Frame = +2
Query: 92 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 250
RVF DV +D LG+IVI L V PKT ENFRALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 111 bits (268), Expect = 3e-25
Identities = 56/98 (57%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 432
F++QGGD T G GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT
Sbjct: 58 FIVQGGDPTG-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAP 116
Query: 433 TSWLDGRHVVFGNVVEGMEVVKQIETLAA-TLGRPLRE 543
LDG+H +FG V GMEV+K++ ++ RP+ E
Sbjct: 117 QPSLDGKHTIFGRVCRGMEVIKRLGSVQTDNTDRPIHE 154
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +2
Query: 104 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSP 283
+VT++ + +G +E+ +P+TC NF L +G+ Y +FHR++ +G P
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVK-DFIVQGGDP 65
Query: 284 TITALG 301
T T G
Sbjct: 66 TGTGRG 71
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 107 bits (256), Expect = 9e-24
Identities = 53/85 (62%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 432
FM+Q GD +GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV
Sbjct: 524 FMIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVA 582
Query: 433 TSWLDGRHVVFGNVVEGMEVVKQIE 507
T WLD +H VFG VV+GM+VV+ IE
Sbjct: 583 TPWLDNKHTVFGRVVKGMDVVQGIE 607
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +2
Query: 128 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVI 250
LG I ++L + PKT ENF C G+ Y +FHRVI
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNHLFHRVI 521
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 92.3 bits (219), Expect = 3e-19
Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Frame = +1
Query: 256 FMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 432
FM+QGGD G GG SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K
Sbjct: 49 FMIQGGD-PKGTGKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAK 107
Query: 433 TSWLDGRHVVFGNVVEGMEVVKQIETLAATLG-RPLRE 543
L+G + +FG V+ G EV+ +E G RPL E
Sbjct: 108 QPHLNGLYTIFGKVIHGFEVLDIMEKTQTGPGDRPLAE 145
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +2
Query: 128 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVI 250
LG I E+ D PK+ ENF ALC G+ Y G+IFHR I
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCA--SGY-YDGTIFHRNI 46
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 89.4 bits (212), Expect = 2e-18
Identities = 51/114 (44%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Frame = +1
Query: 208 ERLRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMAN 384
ER G+ F +FM+QGGD T G GG+SI+G F+DE N L H+G GV+SMAN
Sbjct: 376 ERGYYNGVAFHRSIRNFMIQGGDPTG-TGKGGESIWGKPFKDEPNSKLLHSGRGVVSMAN 434
Query: 385 AGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAA-TLGRPLRE 543
+G TNGSQFF+ + L+ +H VFG VV G+ + +E + RPL E
Sbjct: 435 SGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEE 488
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/57 (43%), Positives = 32/57 (56%)
Frame = +2
Query: 131 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPTITALG 301
G + IEL D+ P+ CENF LC E+G+ Y G FHR I + +G PT T G
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIR-NFMIQGGDPTGTGKG 405
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/90 (46%), Positives = 56/90 (62%)
Frame = +1
Query: 265 QGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWL 444
Q GDF N NGT G+SIY KF DE+ L+H G+LSM+ A D GS F IT L
Sbjct: 74 QAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQL 133
Query: 445 DGRHVVFGNVVEGMEVVKQIETLAATLGRP 534
D +VVFG +++G E++K+IE + G+P
Sbjct: 134 DRNNVVFGKLIQGKEILKKIERVGDEEGKP 163
Score = 71.3 bits (167), Expect = 6e-13
Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Frame = +2
Query: 77 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 232
K P+VF DV++D P +V EL +V PKT ENFRALCTGEKG G YKGS
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62
Query: 233 IFHRVIPISCCKEG 274
FHR++ S + G
Sbjct: 63 FFHRIMKGSSAQAG 76
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 7/65 (10%)
Frame = +2
Query: 80 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 238
M+ P+VFFD+TVD P G+IVIEL +D+TP+T ENFR LCTGE+G G YKGS F
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60
Query: 239 HRVIP 253
++P
Sbjct: 61 DHIVP 65
Score = 60.1 bits (139), Expect = 1e-09
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +1
Query: 214 LRLQGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT-GPGVLSMANAG 390
+ +G F P M GGD N + I+ + +DE F L H GPG++SMA
Sbjct: 53 IHYKGSTFDHIVPDLMWCGGDIIFEN----EPIHSEELDDEYFILNHEDGPGIISMA--- 105
Query: 391 ADTNGSQFFITTVKTSW-LDGRHVVFGNVVEGMEVVKQIE 507
D+NGSQF I +DG HVV G VVEG+++++ IE
Sbjct: 106 -DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIE 144
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 77.4 bits (182), Expect = 9e-15
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = +1
Query: 250 PHFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFIT 423
P F++QGGD T +GTGG SIYG F DE + L+ + G+++MANA + ++NGSQFF T
Sbjct: 59 PGFLVQGGDPTG-SGTGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFT 117
Query: 424 TVKTSWLDGRHVVFGNV 474
K WLD +H +FG V
Sbjct: 118 LDKCDWLDKKHTIFGKV 134
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +2
Query: 131 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPTITALG 301
G I +EL PK+ NF LC +G+ + +IFHRVIP +G PT + G
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIP-GFLVQGGDPTGSGTG 74
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 60.9 bits (141), Expect = 8e-10
Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Frame = +1
Query: 190 CPVHWRERLRL------QGLHFPSCHPHFMLQGGDFTNHNGTGGKSIY----GNK---FE 330
CP+ + L+L G F + F Q GD T G GG SIY G + ++
Sbjct: 21 CPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGDSIYKFLYGEQARFYK 79
Query: 331 DE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI 504
DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG + EG + + +I
Sbjct: 80 DEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRI 139
Query: 505 -ETLAATLGRPLR 540
E RP +
Sbjct: 140 NEAYVDPKNRPYK 152
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/58 (44%), Positives = 30/58 (51%)
Frame = +2
Query: 128 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPTITALG 301
LG IVI+L SD P TC+NF LC K Y G +FH V + G PT T G
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTG-DPTGTGAG 62
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +2
Query: 92 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIP 253
+ F DV++D P+G+I+I L D P F ++ +G+ G Y+ F +++P
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMP 146
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 400 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 504
NG++F IT V + L+ +V G V+EGM VV+++
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKM 264
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/95 (26%), Positives = 45/95 (47%)
Frame = +1
Query: 223 QGLHFPSCHPHFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 402
+G F HF++Q GD + ++ + +LKH ++ A +
Sbjct: 115 KGFLFSRVVKHFVIQAGDSAEFDAVKDWALDRKNIDT---SLKHE-EFMVGTPKAKNEQG 170
Query: 403 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 507
G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 171 GFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 34.7 bits (76), Expect = 0.061
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 116 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIP 253
D PLG++V+ L P T F+ +CT YK + H++ P
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCT-SSSTSYKNTPVHKIFP 125
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +1
Query: 394 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIETL 513
D +F ITT + LDG ++VFG V+EG++VV I ++
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSI 232
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.57
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -1
Query: 506 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 327
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At4g03030.1 68417.m00411 kelch repeat-containing F-box family
protein contains Pfam profiles PF01344: Kelch motif,
PF00646: F-box domain
Length = 442
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -3
Query: 327 KLIAVDGLSPSAVMVGEVPSLQHEMGMTRWKMEPL*PK 214
K++AVD P M+ + L++EMG+ RW+ E PK
Sbjct: 325 KIVAVDCGKPVFFMLDKDWILRYEMGLNRWRKESSVPK 362
>At1g06590.1 68414.m00698 expressed protein
Length = 916
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 215 FGYKGSIFHRVIPISCCKE-GTSPTITALGESPSTAISLKTRISPLSTLDLASSPWLMPV 391
FG K S+ H+ P+S CKE + + S S+ +++ +S DL PW PV
Sbjct: 492 FGPKASMRHKTCPVSVCKEIRLGAHLISDFSSESSTMTIDGSLSSAWLKDL-QKPWGPPV 550
Query: 392 L 394
+
Sbjct: 551 I 551
>At5g07880.1 68418.m00908 SNAP25 homologous protein, putative /
synaptosomal-associated protein SNAP25-like, putative
(SNAP29) identical to Swiss-Prot:Q9SD96 SNAP25
homologous protein SNAP29
(AtSNAP29)(Synaptosomal-associated protein SNAP25-like
2) [Arabidopsis thaliana]; contains Pfam profile:
PF05739 SNARE domain
Length = 251
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 170 KTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPTITALGESPS-TAISLKTR 337
KT + L GEK G G +F R + T P IT G+SP I LKTR
Sbjct: 106 KTVDLDHHLSRGEKILGRLGGVFSRTWKPKKSRSITGPVITK-GDSPKRKVIDLKTR 161
>At4g17486.1 68417.m02616 expressed protein
Length = 224
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -1
Query: 668 NYLYWEGIFIYQEDL-VFNLKYC 603
NYLYW GI I+ + NL+YC
Sbjct: 40 NYLYWFGIGIFHSGIEAHNLEYC 62
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 409 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 507
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 131 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPT 286
G I +EL + +P+ + F LC + +KG F RVI + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 409 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 507
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 131 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPT 286
G I +EL + +P+ + F LC + +KG F RVI + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 409 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 507
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 131 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPISCCKEGTSPT 286
G I +EL + +P+ + F LC + +KG F RVI + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
>At1g79690.1 68414.m09294 MutT/nudix family protein contains Pfam
NUDIX domain [PF00293]; very low similarity to Chain A
and Chain B of Escherichia coli isopentenyl
diphosphate:dimethylallyl diphosphate isomerase
[gi:15826361] [gi:15826360]
Length = 772
Score = 29.1 bits (62), Expect = 3.0
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 677 IHLNYLYWEGIFIYQEDLVFNLKYCSL 597
+ NYLY +G F++ ED F++ + +
Sbjct: 681 LQFNYLYEKGAFVFHEDSTFSVDFAKI 707
>At3g59700.1 68416.m06661 lectin protein kinase, putative similar to
receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733
Length = 661
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Frame = +1
Query: 235 FPSCHPHFMLQG-------GDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLS 375
F + H +F+ QG G FT N T K +G FE+E+ +K++ GV+S
Sbjct: 20 FYNSHGYFVSQGSVGIGFNGYFTLTNTT--KHTFGQAFENEHVEIKNSSTGVIS 71
>At3g08840.2 68416.m01026 D-alanine--D-alanine ligase family similar
to D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase)
(Swiss-Prot:O51218) [Borrelia burgdorferi]; similar to
D-alanine--D-alanine ligase (EC 6.3.2.4)
(D-alanylalanine synthetase) (D-Ala-D-Ala ligase).
(Swiss-Prot:P95803) [Streptococcus mutans]
Length = 937
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -3
Query: 369 DARSSVLKGEILVFKLIAVDGLSPSAVMVGEVPSLQHEM 253
DA V GE+LV ++ V G++PS V++ + + Q M
Sbjct: 881 DAFVHVETGEVLVIEVNTVPGMTPSTVLIQQALAEQPPM 919
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 63 LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTS 188
+ +P C+ + + T P EKLLL TS+P RV S
Sbjct: 8 ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMS 49
>At1g33470.2 68414.m04143 RNA recognition motif (RRM)-containing
protein similar to RRM-containing protein SEB-4 [Xenopus
laevis] GI:8895698; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 244
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 229 LHFPSCHPHFMLQGGDFTNHNGT 297
LH+P+ H+ GG++ +HNG+
Sbjct: 202 LHYPNHMFHYSAPGGNYPHHNGS 224
>At1g33470.1 68414.m04142 RNA recognition motif (RRM)-containing
protein similar to RRM-containing protein SEB-4 [Xenopus
laevis] GI:8895698; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 245
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 229 LHFPSCHPHFMLQGGDFTNHNGT 297
LH+P+ H+ GG++ +HNG+
Sbjct: 203 LHYPNHMFHYSAPGGNYPHHNGS 225
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 27.9 bits (59), Expect = 7.0
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 274 DFTNHNG-TGGKSIYGNKFEDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSW 441
+F N N T S + + E+E KH+ L + A +G DTNG FF KT+
Sbjct: 517 NFANSNYLTERTSRWIEECEEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTA 576
Query: 442 LDGRHVVFGNVVEGMEVVKQIE 507
+VF N + EVV++++
Sbjct: 577 KKDIELVFVNPLS--EVVEKLQ 596
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 474 NIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLK 346
N+ D+ S+ + S D+E+G + S G G+D V K
Sbjct: 543 NVENDDSSSQSFASVSSRDQEVGDVRFSGGYGLGQDLSFGVCK 585
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 422 VMKNWEPLVSAPALAMERTPGPVCLR 345
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 422 VMKNWEPLVSAPALAMERTPGPVCLR 345
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -1
Query: 467 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 300
PK +PS E +V +W + A ER P P+ K ++ L DFP
Sbjct: 666 PKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFP 721
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 422 VMKNWEPLVSAPALAMERTPGPVCLR 345
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,005,547
Number of Sequences: 28952
Number of extensions: 394349
Number of successful extensions: 1186
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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