Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20008
(705 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 96 5e-20
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 96 5e-20
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 96 5e-20
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 96 5e-20
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 96 5e-20
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 34 0.22
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 34 0.22
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 30 2.7
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 30 2.7
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 30 2.7
AY058343-1|AAL13572.1| 403|Drosophila melanogaster GH11867p pro... 29 8.1
AE014297-1960|AAN13634.1| 403|Drosophila melanogaster CG31344-P... 29 8.1
AE014134-2109|AAF53129.1| 174|Drosophila melanogaster CG14943-P... 29 8.1
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 95.9 bits (228), Expect = 5e-20
Identities = 47/92 (51%), Positives = 59/92 (64%)
Frame = +3
Query: 234 LVQICKMPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 413
L + + PKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESALAK 115
Query: 414 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNT 509
+P+ + +GTNT
Sbjct: 116 NVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNT 147
Score = 94.7 bits (225), Expect = 1e-19
Identities = 47/65 (72%), Positives = 51/65 (78%)
Frame = +2
Query: 509 VTKLVEKKKAQLWSSLMMLIPLSWFLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCL 688
VTKL+E+KKAQL + PL LFLPALCRKMGVPYCIVKGK+RLG LV RKTCT L
Sbjct: 148 VTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTL 207
Query: 689 ALTNV 703
ALT V
Sbjct: 208 ALTTV 212
Score = 58.0 bits (134), Expect = 1e-08
Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +1
Query: 169 NPLFEKRPKNFAIGQGIQPTRDLSRFVRCPSISASSARRLYFSVV*KCPLRSTNLPRHWT 348
N LFEKRPKNF IGQ +QP RDLSRFVR P ++ K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 349 R-LQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTRHQAGR 525
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 526 EEEGAVVVIAHDVDPIELV-SLPA 594
+++ +VVIAHDVDP+ELV LPA
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPA 177
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 95.9 bits (228), Expect = 5e-20
Identities = 47/92 (51%), Positives = 59/92 (64%)
Frame = +3
Query: 234 LVQICKMPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 413
L + + PKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAK 115
Query: 414 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNT 509
+P+ + +GTNT
Sbjct: 116 KLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNT 147
Score = 94.7 bits (225), Expect = 1e-19
Identities = 47/65 (72%), Positives = 51/65 (78%)
Frame = +2
Query: 509 VTKLVEKKKAQLWSSLMMLIPLSWFLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCL 688
VTKL+E+KKAQL + PL LFLPALCRKMGVPYCIVKGK+RLG LV RKTCT L
Sbjct: 148 VTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTL 207
Query: 689 ALTNV 703
ALT V
Sbjct: 208 ALTTV 212
Score = 58.0 bits (134), Expect = 1e-08
Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +1
Query: 169 NPLFEKRPKNFAIGQGIQPTRDLSRFVRCPSISASSARRLYFSVV*KCPLRSTNLPRHWT 348
N LFEKRPKNF IGQ +QP RDLSRFVR P ++ K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 349 R-LQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTRHQAGR 525
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 526 EEEGAVVVIAHDVDPIELV-SLPA 594
+++ +VVIAHDVDP+ELV LPA
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPA 177
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 95.9 bits (228), Expect = 5e-20
Identities = 47/92 (51%), Positives = 59/92 (64%)
Frame = +3
Query: 234 LVQICKMPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 413
L + + PKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAK 115
Query: 414 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNT 509
+P+ + +GTNT
Sbjct: 116 KLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNT 147
Score = 94.7 bits (225), Expect = 1e-19
Identities = 47/65 (72%), Positives = 51/65 (78%)
Frame = +2
Query: 509 VTKLVEKKKAQLWSSLMMLIPLSWFLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCL 688
VTKL+E+KKAQL + PL LFLPALCRKMGVPYCIVKGK+RLG LV RKTCT L
Sbjct: 148 VTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTL 207
Query: 689 ALTNV 703
ALT V
Sbjct: 208 ALTTV 212
Score = 58.0 bits (134), Expect = 1e-08
Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +1
Query: 169 NPLFEKRPKNFAIGQGIQPTRDLSRFVRCPSISASSARRLYFSVV*KCPLRSTNLPRHWT 348
N LFEKRPKNF IGQ +QP RDLSRFVR P ++ K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 349 R-LQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTRHQAGR 525
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 526 EEEGAVVVIAHDVDPIELV-SLPA 594
+++ +VVIAHDVDP+ELV LPA
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPA 177
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 95.9 bits (228), Expect = 5e-20
Identities = 47/92 (51%), Positives = 59/92 (64%)
Frame = +3
Query: 234 LVQICKMPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 413
L + + PKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAK 115
Query: 414 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNT 509
+P+ + +GTNT
Sbjct: 116 KLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNT 147
Score = 94.7 bits (225), Expect = 1e-19
Identities = 47/65 (72%), Positives = 51/65 (78%)
Frame = +2
Query: 509 VTKLVEKKKAQLWSSLMMLIPLSWFLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCL 688
VTKL+E+KKAQL + PL LFLPALCRKMGVPYCIVKGK+RLG LV RKTCT L
Sbjct: 148 VTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTL 207
Query: 689 ALTNV 703
ALT V
Sbjct: 208 ALTTV 212
Score = 58.0 bits (134), Expect = 1e-08
Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +1
Query: 169 NPLFEKRPKNFAIGQGIQPTRDLSRFVRCPSISASSARRLYFSVV*KCPLRSTNLPRHWT 348
N LFEKRPKNF IGQ +QP RDLSRFVR P ++ K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 349 R-LQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTRHQAGR 525
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 526 EEEGAVVVIAHDVDPIELV-SLPA 594
+++ +VVIAHDVDP+ELV LPA
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPA 177
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 95.9 bits (228), Expect = 5e-20
Identities = 47/92 (51%), Positives = 59/92 (64%)
Frame = +3
Query: 234 LVQICKMPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 413
L + + PKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAK 115
Query: 414 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNT 509
+P+ + +GTNT
Sbjct: 116 KLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNT 147
Score = 94.7 bits (225), Expect = 1e-19
Identities = 47/65 (72%), Positives = 51/65 (78%)
Frame = +2
Query: 509 VTKLVEKKKAQLWSSLMMLIPLSWFLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCL 688
VTKL+E+KKAQL + PL LFLPALCRKMGVPYCIVKGK+RLG LV RKTCT L
Sbjct: 148 VTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTL 207
Query: 689 ALTNV 703
ALT V
Sbjct: 208 ALTTV 212
Score = 58.0 bits (134), Expect = 1e-08
Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 2/144 (1%)
Frame = +1
Query: 169 NPLFEKRPKNFAIGQGIQPTRDLSRFVRCPSISASSARRLYFSVV*KCPLRSTNLPRHWT 348
N LFEKRPKNF IGQ +QP RDLSRFVR P ++ K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 349 R-LQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAQTRHQAGR 525
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 526 EEEGAVVVIAHDVDPIELV-SLPA 594
+++ +VVIAHDVDP+ELV LPA
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPA 177
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 33.9 bits (74), Expect = 0.22
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +2
Query: 569 PLSWFLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTN 700
P+ L LP LC VPY V+ K LG V R C TN
Sbjct: 61 PIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTN 106
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 33.9 bits (74), Expect = 0.22
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +2
Query: 569 PLSWFLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTN 700
P+ L LP LC VPY V+ K LG V R C TN
Sbjct: 61 PIEILLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTN 106
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 569 PLSWFLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLAL 694
P+ LPA+C + G+PY ++ LGA + K T L
Sbjct: 94 PVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALL 135
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 569 PLSWFLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLAL 694
P+ LPA+C + G+PY ++ LGA + K T L
Sbjct: 94 PVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALL 135
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 30.3 bits (65), Expect = 2.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 569 PLSWFLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLAL 694
P+ LPA+C + G+PY ++ LGA + K T L
Sbjct: 94 PVDIMCHLPAVCEEKGIPYTYTPSRADLGAAMGVKRGTVALL 135
>AY058343-1|AAL13572.1| 403|Drosophila melanogaster GH11867p
protein.
Length = 403
Score = 28.7 bits (61), Expect = 8.1
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -3
Query: 301 RR*STAFWRWMRIYLGIL--QIWTSPELAECPDQWQSSLASSRREDSRSSWA 152
R+ STAF + R I Q W + +A+ ++ +S+A+ RR SRSS A
Sbjct: 123 RQSSTAFTAYRRYVRTIFHTQAWYNHNIADRGSRFWTSIAAVRRAHSRSSHA 174
>AE014297-1960|AAN13634.1| 403|Drosophila melanogaster CG31344-PA
protein.
Length = 403
Score = 28.7 bits (61), Expect = 8.1
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -3
Query: 301 RR*STAFWRWMRIYLGIL--QIWTSPELAECPDQWQSSLASSRREDSRSSWA 152
R+ STAF + R I Q W + +A+ ++ +S+A+ RR SRSS A
Sbjct: 123 RQSSTAFTAYRRYVRTIFHTQAWYNHNIADRGSRFWTSIAAVRRAHSRSSHA 174
>AE014134-2109|AAF53129.1| 174|Drosophila melanogaster CG14943-PA
protein.
Length = 174
Score = 28.7 bits (61), Expect = 8.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 463 SLHQRGPTPSDPAQTRHQAGREEEGAVVVIAHDVDPIELVSLPASVMP 606
+L + PT D QT + G+EE+G+ + P+ +++PA+ +P
Sbjct: 4 TLDETPPTRRDKPQTLN-IGQEEQGSDPASGNTSSPVSSIAIPAARVP 50
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,579,884
Number of Sequences: 53049
Number of extensions: 616738
Number of successful extensions: 2072
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2067
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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