Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20005
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.1  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 271 IMLVYDVTNEKSFENIKNWIRNIEE 345
           IML+    ++KSF+N  N +  ++E
Sbjct: 96  IMLIISFMHKKSFKNFVNNVAALDE 120


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 204 ICNLTFLPSRSIVRILKSIPIVDIKEML 121
           +C LT L  +   ++L  IP+     ML
Sbjct: 299 VCELTILEYKRTKKLLYRIPVTKTDSML 326


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 204 ICNLTFLPSRSIVRILKSIPIVDIKEML 121
           +C LT L  +   ++L  IP+     ML
Sbjct: 124 VCELTILEYKRTKKLLYRIPVTKTDSML 151


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 466 PQILSDILWLIVHLAPLI 413
           P IL  + W+++HL  L+
Sbjct: 300 PFILLQVAWIVLHLIRLM 317


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,952
Number of Sequences: 336
Number of extensions: 3915
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)