Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20005
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 147 6e-36
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 147 6e-36
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 147 6e-36
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 133 1e-31
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 133 1e-31
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 124 9e-29
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 119 3e-27
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 112 3e-25
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 112 3e-25
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 112 3e-25
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 112 3e-25
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 112 3e-25
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 104 8e-23
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 102 3e-22
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 100 1e-21
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 96 3e-20
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 94 8e-20
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 93 3e-19
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 92 5e-19
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 91 8e-19
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 91 8e-19
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 89 4e-18
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 88 6e-18
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 88 7e-18
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 87 1e-17
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 87 1e-17
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 86 3e-17
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 84 9e-17
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 83 3e-16
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 80 2e-15
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 80 2e-15
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 79 3e-15
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 78 6e-15
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 78 8e-15
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 78 8e-15
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 75 6e-14
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 72 4e-13
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 72 4e-13
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 72 4e-13
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 70 2e-12
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 66 2e-11
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 66 2e-11
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 64 1e-10
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 62 3e-10
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 62 3e-10
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 62 4e-10
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 61 7e-10
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 61 7e-10
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 60 1e-09
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 60 2e-09
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 60 2e-09
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 58 5e-09
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 58 5e-09
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 58 7e-09
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 57 2e-08
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 57 2e-08
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 57 2e-08
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 57 2e-08
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 54 8e-08
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 54 8e-08
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 53 2e-07
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 52 6e-07
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 52 6e-07
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 52 6e-07
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 52 6e-07
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 52 6e-07
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 52 6e-07
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 51 8e-07
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 51 8e-07
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 49 3e-06
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 49 3e-06
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 48 7e-06
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 45 5e-05
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 44 9e-05
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 44 1e-04
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 44 1e-04
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 44 2e-04
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 43 2e-04
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical ... 43 2e-04
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 42 4e-04
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 42 6e-04
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 41 0.001
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 41 0.001
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 41 0.001
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 40 0.001
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 38 0.006
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 38 0.010
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 38 0.010
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 37 0.018
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 36 0.024
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 36 0.031
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z81029-1|CAB02697.1| 465|Caenorhabditis elegans Hypothetical pr... 35 0.055
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 35 0.055
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 34 0.096
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 34 0.096
AF040648-6|AAO91708.1| 908|Caenorhabditis elegans Lethal protei... 34 0.096
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 34 0.096
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 34 0.096
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 33 0.17
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 33 0.22
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 33 0.22
Z37093-6|CAJ85783.1| 176|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical pr... 32 0.51
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 29 2.7
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.3
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC024202-8|AAK93869.2| 816|Caenorhabditis elegans Hypothetical ... 28 6.3
Z79753-2|CAB02087.1| 249|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 28 8.3
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 147 bits (357), Expect = 6e-36
Identities = 69/77 (89%), Positives = 74/77 (96%)
Frame = +2
Query: 23 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 202
MAKTYD LFKLLLIGDSGVGKT +LFRFS+D+FN SFISTIGIDFKIRTI+LDGKK+KLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 203 IWDTAGQERFRTITTAY 253
IWDTAGQERFRTITTAY
Sbjct: 61 IWDTAGQERFRTITTAY 77
Score = 87.4 bits (207), Expect = 1e-17
Identities = 36/45 (80%), Positives = 45/45 (100%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKC 390
RG+MGI+LVYD+TNE+SFENIKNWIRNIEE+A++DVE+MI+GNKC
Sbjct: 79 RGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKC 123
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 147 bits (357), Expect = 6e-36
Identities = 69/77 (89%), Positives = 74/77 (96%)
Frame = +2
Query: 23 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 202
MAKTYD LFKLLLIGDSGVGKT +LFRFS+D+FN SFISTIGIDFKIRTI+LDGKK+KLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 203 IWDTAGQERFRTITTAY 253
IWDTAGQERFRTITTAY
Sbjct: 61 IWDTAGQERFRTITTAY 77
Score = 139 bits (336), Expect = 2e-33
Identities = 60/84 (71%), Positives = 79/84 (94%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+MGI+LVYD+TNE+SFENIKNWIRNIEE+A++DVE+MI+GNKCD++ +R+VS++RGEQ
Sbjct: 79 RGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQ 138
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
LAIEY KF+ETSAK +LN++ AF
Sbjct: 139 LAIEYGTKFLETSAKANLNIDEAF 162
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 147 bits (357), Expect = 6e-36
Identities = 69/77 (89%), Positives = 74/77 (96%)
Frame = +2
Query: 23 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 202
MAKTYD LFKLLLIGDSGVGKT +LFRFS+D+FN SFISTIGIDFKIRTI+LDGKK+KLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 203 IWDTAGQERFRTITTAY 253
IWDTAGQERFRTITTAY
Sbjct: 61 IWDTAGQERFRTITTAY 77
Score = 139 bits (336), Expect = 2e-33
Identities = 60/84 (71%), Positives = 79/84 (94%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+MGI+LVYD+TNE+SFENIKNWIRNIEE+A++DVE+MI+GNKCD++ +R+VS++RGEQ
Sbjct: 79 RGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQ 138
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
LAIEY KF+ETSAK +LN++ AF
Sbjct: 139 LAIEYGTKFLETSAKANLNIDEAF 162
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 133 bits (322), Expect = 1e-31
Identities = 61/75 (81%), Positives = 69/75 (92%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
+ YD LFKLLLIGDSGVGKT IL+RFS+DAFN +FISTIGIDFKI+TI+L GKK+KLQIW
Sbjct: 4 RPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIW 63
Query: 209 DTAGQERFRTITTAY 253
DTAGQERF TITT+Y
Sbjct: 64 DTAGQERFHTITTSY 78
Score = 117 bits (281), Expect = 1e-26
Identities = 54/87 (62%), Positives = 71/87 (81%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 426
S RG+MGIMLVYD+TN KSF+NI W+RNI+E+AS DV KMILGNKCD+ +R VS+ER
Sbjct: 77 SYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRER 136
Query: 427 GEQLAIEYQIKFVETSAKDSLNVEYAF 507
GE++A ++ I F ETSAK +++V+ AF
Sbjct: 137 GEKIAQDHGISFHETSAKLNVHVDTAF 163
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 133 bits (322), Expect = 1e-31
Identities = 61/75 (81%), Positives = 69/75 (92%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
+ YD LFKLLLIGDSGVGKT IL+RFS+DAFN +FISTIGIDFKI+TI+L GKK+KLQIW
Sbjct: 4 RPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIW 63
Query: 209 DTAGQERFRTITTAY 253
DTAGQERF TITT+Y
Sbjct: 64 DTAGQERFHTITTSY 78
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKC 390
S RG+MGIMLVYD+TN KSF+NI W+RNI+E+AS DV KMILGNKC
Sbjct: 77 SYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKC 124
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 124 bits (298), Expect = 9e-29
Identities = 56/77 (72%), Positives = 67/77 (87%)
Frame = +2
Query: 23 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 202
M YD LFKLLLIGDSGVGK+ +L RF++D + S+ISTIG+DFKIRTI+LDGK +KLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 203 IWDTAGQERFRTITTAY 253
IWDTAGQERFRTIT++Y
Sbjct: 64 IWDTAGQERFRTITSSY 80
Score = 90.6 bits (215), Expect = 1e-18
Identities = 39/88 (44%), Positives = 62/88 (70%)
Frame = +1
Query: 244 NSILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKE 423
+S RG+ GI++VYD+T++++F N+K W++ I+ A +V K+++GNKCDL ++R V +
Sbjct: 78 SSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVETQ 137
Query: 424 RGEQLAIEYQIKFVETSAKDSLNVEYAF 507
+ A + I F+ETSAK S NVE AF
Sbjct: 138 AAQDYAGQLGIPFLETSAKSSTNVEQAF 165
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 119 bits (286), Expect = 3e-27
Identities = 51/75 (68%), Positives = 69/75 (92%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
+ YD LFKLL+IGDSGVGK+S+L RF+++ F+ ++I+TIG+DFKIRT+D++G++VKLQIW
Sbjct: 5 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIW 64
Query: 209 DTAGQERFRTITTAY 253
DTAGQERFRTIT+ Y
Sbjct: 65 DTAGQERFRTITSTY 79
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+ G+++VYDVTN +SF N+K W++ IE N + V+K+++GNKC+ + +R V +
Sbjct: 81 RGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDS-VQKVLVGNKCEENERRVVLESDARN 139
Query: 436 LAIEYQIKFVETSAKDSLNVEYAFS 510
A I F ETSAK+ NVE F+
Sbjct: 140 YAQSMNISFFETSAKEDKNVEPMFT 164
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 112 bits (269), Expect = 3e-25
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
+ +D +FKLL+IG+S VGKTS LFR+ +D+F +F+ST+GIDFK++T+ K+VKLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 209 DTAGQERFRTITTAY 253
DTAGQER+RTITTAY
Sbjct: 77 DTAGQERYRTITTAY 91
Score = 92.7 bits (220), Expect = 3e-19
Identities = 38/84 (45%), Positives = 64/84 (76%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+MG +L+YD+TNE+SF ++++W I+ + + + +++GNKCD+DS+R VS +RG Q
Sbjct: 93 RGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQ 152
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
LA + ++F ETSAK+++NV+ F
Sbjct: 153 LADQLGLEFFETSAKENINVKAVF 176
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 112 bits (269), Expect = 3e-25
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
+ +D +FKLL+IG+S VGKTS LFR+ +D+F +F+ST+GIDFK++T+ K+VKLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 209 DTAGQERFRTITTAY 253
DTAGQER+RTITTAY
Sbjct: 77 DTAGQERYRTITTAY 91
Score = 92.7 bits (220), Expect = 3e-19
Identities = 38/84 (45%), Positives = 64/84 (76%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+MG +L+YD+TNE+SF ++++W I+ + + + +++GNKCD+DS+R VS +RG Q
Sbjct: 93 RGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQ 152
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
LA + ++F ETSAK+++NV+ F
Sbjct: 153 LADQLGLEFFETSAKENINVKAVF 176
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 112 bits (269), Expect = 3e-25
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
+ +D +FKLL+IG+S VGKTS LFR+ +D+F +F+ST+GIDFK++T+ K+VKLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 209 DTAGQERFRTITTAY 253
DTAGQER+RTITTAY
Sbjct: 77 DTAGQERYRTITTAY 91
Score = 92.7 bits (220), Expect = 3e-19
Identities = 38/84 (45%), Positives = 64/84 (76%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+MG +L+YD+TNE+SF ++++W I+ + + + +++GNKCD+DS+R VS +RG Q
Sbjct: 93 RGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQ 152
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
LA + ++F ETSAK+++NV+ F
Sbjct: 153 LADQLGLEFFETSAKENINVKAVF 176
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 112 bits (269), Expect = 3e-25
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
+ +D +FKLL+IG+S VGKTS LFR+ +D+F +F+ST+GIDFK++T+ K+VKLQIW
Sbjct: 31 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 90
Query: 209 DTAGQERFRTITTAY 253
DTAGQER+RTITTAY
Sbjct: 91 DTAGQERYRTITTAY 105
Score = 92.7 bits (220), Expect = 3e-19
Identities = 38/84 (45%), Positives = 64/84 (76%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+MG +L+YD+TNE+SF ++++W I+ + + + +++GNKCD+DS+R VS +RG Q
Sbjct: 107 RGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQ 166
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
LA + ++F ETSAK+++NV+ F
Sbjct: 167 LADQLGLEFFETSAKENINVKAVF 190
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 112 bits (269), Expect = 3e-25
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
+ +D +FKLL+IG+S VGKTS LFR+ +D+F +F+ST+GIDFK++T+ K+VKLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIW 76
Query: 209 DTAGQERFRTITTAY 253
DTAGQER+RTITTAY
Sbjct: 77 DTAGQERYRTITTAY 91
Score = 92.7 bits (220), Expect = 3e-19
Identities = 38/84 (45%), Positives = 64/84 (76%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+MG +L+YD+TNE+SF ++++W I+ + + + +++GNKCD+DS+R VS +RG Q
Sbjct: 93 RGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQ 152
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
LA + ++F ETSAK+++NV+ F
Sbjct: 153 LADQLGLEFFETSAKENINVKAVF 176
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 104 bits (249), Expect = 8e-23
Identities = 47/66 (71%), Positives = 56/66 (84%)
Frame = +2
Query: 23 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 202
M YD LFKLLLIGDSGVGK+ +L RF++D + S+ISTIG+DFKIRTI+LDGK +KLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 203 IWDTAG 220
IWDTAG
Sbjct: 64 IWDTAG 69
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 102 bits (244), Expect = 3e-22
Identities = 45/73 (61%), Positives = 60/73 (82%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 214
YD LFK++LIGDSGVGK+++L RF+ + FN+ STIG++F R+I ++GK VK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDT 67
Query: 215 AGQERFRTITTAY 253
AGQER+R IT+AY
Sbjct: 68 AGQERYRAITSAY 80
Score = 77.8 bits (183), Expect = 8e-15
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG++G +LVYD+ ++EN++ W++ + ++A ++ M++GNK DL R V + +
Sbjct: 82 RGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTDEAKI 141
Query: 436 LAIEYQIKFVETSAKDSLNVEYAFS--L*PGTKSENGKETGSE 558
A Q+ F+ETSA DS NVE AF+ L KS + K G++
Sbjct: 142 YAERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKHVGTD 184
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 100 bits (239), Expect = 1e-21
Identities = 44/73 (60%), Positives = 60/73 (82%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 214
YD LFK++LIGDSGVGK+++L RF+ + F++ STIG++F R+I ++GK VK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDT 67
Query: 215 AGQERFRTITTAY 253
AGQER+R IT+AY
Sbjct: 68 AGQERYRAITSAY 80
Score = 51.6 bits (118), Expect = 6e-07
Identities = 17/46 (36%), Positives = 33/46 (71%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 393
RG++G +LVYD+ ++EN++ W++ + ++A ++ M +GNKCD
Sbjct: 82 RGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 95.9 bits (228), Expect = 3e-20
Identities = 40/62 (64%), Positives = 57/62 (91%)
Frame = +2
Query: 29 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
+ YD LFKLL+IGDSGVGK+S+L RF+++ F+ ++I+TIG+DFKIRT+D++G++VKLQIW
Sbjct: 5 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIW 64
Query: 209 DT 214
DT
Sbjct: 65 DT 66
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 94.3 bits (224), Expect = 8e-20
Identities = 42/73 (57%), Positives = 56/73 (76%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 214
+D LFK++L+GD GVGKT ++ RF F +TIG+DF ++T+ +DGK+VKLQIWDT
Sbjct: 7 FDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDT 66
Query: 215 AGQERFRTITTAY 253
GQERFRTIT +Y
Sbjct: 67 GGQERFRTITQSY 79
Score = 72.5 bits (170), Expect = 3e-13
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 426
S R + GI+L YD+T ++SF +++ WI ++ + A+ +V K+++G KCDL+ QR + E
Sbjct: 78 SYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIEAEE 137
Query: 427 GEQL-AIEYQIKFVETSAKDSLNVEYAF 507
E L +ETSAK ++NV+ AF
Sbjct: 138 AEMLQRANGMFAMLETSAKGNVNVDNAF 165
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 92.7 bits (220), Expect = 3e-19
Identities = 38/68 (55%), Positives = 56/68 (82%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K+L+IG+SGVGK+S++ RF +D F+ +TIG+DF++ ++ +DG +VKL IWDTAGQER
Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQER 72
Query: 230 FRTITTAY 253
FRT+T +Y
Sbjct: 73 FRTLTPSY 80
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD-VEKMILGNKCDLDSQRQVSKE 423
S RG+ G++ VYDVT+ SFE + +W++ ++ + D + KM++ NK D+ + R V++E
Sbjct: 79 SYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMPN-RVVTRE 137
Query: 424 RGEQLAIEYQIKFVETSAKDSLNVEYAF 507
G + A ++ F+E SAK V+ F
Sbjct: 138 EGLKFAKRHRTLFIEASAKTKEGVQCTF 165
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 91.9 bits (218), Expect = 5e-19
Identities = 37/74 (50%), Positives = 58/74 (78%)
Frame = +2
Query: 32 TYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 211
+Y+ LFK++++GD GK+ IL RF+E++F + IST+G+DFK++TI L K++L++WD
Sbjct: 2 SYNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWD 61
Query: 212 TAGQERFRTITTAY 253
TAG ER+RTI +Y
Sbjct: 62 TAGMERYRTIYNSY 75
Score = 84.2 bits (199), Expect = 9e-17
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +1
Query: 244 NSILRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDLDSQRQVSK 420
NS + G+M VYD+TNEKSFEN+ K W++ I+++A + M++GNK D+D +R+V
Sbjct: 73 NSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDF 132
Query: 421 ERGEQLAIEYQIKFVETSAKDSLNVEYAF 507
+R E+LA + E SAK +N E AF
Sbjct: 133 DRAEKLASRLGVSLYEVSAKTGINCEEAF 161
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 91.1 bits (216), Expect = 8e-19
Identities = 41/69 (59%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAF-NISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
K++L+GDS GKT +L R+ + AF N +FIST+GID++ + I + KKVKLQIWDTAGQE
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQE 63
Query: 227 RFRTITTAY 253
RFR++TT+Y
Sbjct: 64 RFRSVTTSY 72
Score = 82.2 bits (194), Expect = 4e-16
Identities = 40/87 (45%), Positives = 55/87 (63%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 426
S R + ++LVYD+ N SFEN +NW+ I+E V+ ++GNKCDL R V +
Sbjct: 71 SYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL--PRAVPTDE 128
Query: 427 GEQLAIEYQIKFVETSAKDSLNVEYAF 507
G++LA YQI F+ETSAK NV+ AF
Sbjct: 129 GKRLAEAYQIPFMETSAKTGFNVDRAF 155
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 91.1 bits (216), Expect = 8e-19
Identities = 41/69 (59%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAF-NISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
K++L+GDS GKT +L R+ + AF N +FIST+GID++ + I + KKVKLQIWDTAGQE
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQE 63
Query: 227 RFRTITTAY 253
RFR++TT+Y
Sbjct: 64 RFRSVTTSY 72
Score = 82.2 bits (194), Expect = 4e-16
Identities = 40/87 (45%), Positives = 55/87 (63%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 426
S R + ++LVYD+ N SFEN +NW+ I+E V+ ++GNKCDL R V +
Sbjct: 71 SYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL--PRAVPTDE 128
Query: 427 GEQLAIEYQIKFVETSAKDSLNVEYAF 507
G++LA YQI F+ETSAK NV+ AF
Sbjct: 129 GKRLAEAYQIPFMETSAKTGFNVDRAF 155
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 88.6 bits (210), Expect = 4e-18
Identities = 38/73 (52%), Positives = 53/73 (72%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 214
Y +FK ++IGD GVGK+ +L +F+E F TIG++F R I++ G+K+KLQIWDT
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
Query: 215 AGQERFRTITTAY 253
AGQERFR +T +Y
Sbjct: 68 AGQERFRAVTRSY 80
Score = 67.3 bits (157), Expect = 1e-11
Identities = 30/87 (34%), Positives = 50/87 (57%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 426
S RG+ G ++VYD+T ++ ++ +W+ + + + + ++GNK DL+ QR V E
Sbjct: 79 SYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLEDQRDVPYEE 138
Query: 427 GEQLAIEYQIKFVETSAKDSLNVEYAF 507
+ A E + F+E SAK NVE AF
Sbjct: 139 AKAFAEENGLTFLECSAKTGSNVEDAF 165
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 88.2 bits (209), Expect = 6e-18
Identities = 38/73 (52%), Positives = 56/73 (76%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 214
Y LFK++L+G++GVGKT ++ +F++ F +TIG+DF I+T+ + K+KLQIWDT
Sbjct: 4 YKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDT 63
Query: 215 AGQERFRTITTAY 253
AGQERFR+IT +Y
Sbjct: 64 AGQERFRSITQSY 76
Score = 61.3 bits (142), Expect = 7e-10
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 426
S R + I+LVYDV+ + SF+ + W+ IE A+ V K+++GNK D +R+V +
Sbjct: 75 SYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERI 134
Query: 427 GEQLAIEYQIK-FVETSAKDSLNVEYAF 507
G + Q F+ETSA D+ NV+ F
Sbjct: 135 GRDFSDVNQFDYFLETSALDATNVDQLF 162
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 87.8 bits (208), Expect = 7e-18
Identities = 38/74 (51%), Positives = 55/74 (74%)
Frame = +2
Query: 32 TYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 211
+Y LFK ++IGD+GVGK+ +L +F++ F TIG++F R + +DGK++KLQIWD
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWD 61
Query: 212 TAGQERFRTITTAY 253
TAGQE FR+IT +Y
Sbjct: 62 TAGQESFRSITRSY 75
Score = 84.2 bits (199), Expect = 9e-17
Identities = 35/87 (40%), Positives = 62/87 (71%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 426
S RG+ G +LVYD+T +F ++ +W+ + +++++++ M++GNK DL+++R+V +E
Sbjct: 74 SYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVKREE 133
Query: 427 GEQLAIEYQIKFVETSAKDSLNVEYAF 507
GE A E+ + F+ETSAK + NVE AF
Sbjct: 134 GEAFAREHGLVFMETSAKTAANVEEAF 160
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 9/82 (10%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD---------GK 187
YD L K L +GDSGVGKTS L R++++ F FIST+GIDFK + + G+
Sbjct: 4 YDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQ 63
Query: 188 KVKLQIWDTAGQERFRTITTAY 253
+V LQ+WDTAGQERFR++TTA+
Sbjct: 64 RVLLQLWDTAGQERFRSLTTAF 85
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/85 (42%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKE 423
+ R +MG +L++D+TNE+SF NI++W+ ++ +A + +I+ GNK DL+++RQVS
Sbjct: 84 AFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTA 143
Query: 424 RGEQLAIEYQIKFVETSAKDSLNVE 498
R +QLA + + + ETSA S NVE
Sbjct: 144 RAKQLADQLGLPYFETSACTSTNVE 168
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/82 (52%), Positives = 57/82 (69%), Gaps = 9/82 (10%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD---------GK 187
YD L K L +GDSGVGKTS L R++++ F FIST+GIDFK + + G+
Sbjct: 4 YDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGGRGQ 63
Query: 188 KVKLQIWDTAGQERFRTITTAY 253
+V LQ+WDTAGQERFR++TTA+
Sbjct: 64 RVLLQLWDTAGQERFRSLTTAF 85
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/85 (42%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKE 423
+ R +MG +L++D+TNE+SF NI++W+ ++ +A + +I+ GNK DL+++RQVS
Sbjct: 84 AFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTA 143
Query: 424 RGEQLAIEYQIKFVETSAKDSLNVE 498
R +QLA + + + ETSA S NVE
Sbjct: 144 RAKQLADQLGLPYFETSACTSTNVE 168
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = +2
Query: 23 MAKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 202
M Y LFK++LIG+ GVGK+++L RF+ + FN+ TIG++F + I ++GK VK+Q
Sbjct: 1 MGNEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQ 60
Query: 203 IWDTAGQERFRTITTAY 253
IWDTAG ERFR ++Y
Sbjct: 61 IWDTAGMERFRCGASSY 77
Score = 70.9 bits (166), Expect = 9e-13
Identities = 32/89 (35%), Positives = 57/89 (64%)
Frame = +1
Query: 244 NSILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKE 423
+S RG++G +LVYD++ K++E+++ W++ + ++A+ D+ ++GNK DL V +
Sbjct: 75 SSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDL--SHAVPTD 132
Query: 424 RGEQLAIEYQIKFVETSAKDSLNVEYAFS 510
+ A I F+ETSA D+ NVE AF+
Sbjct: 133 EAKIYAERNHISFIETSALDNTNVEAAFT 161
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 84.2 bits (199), Expect = 9e-17
Identities = 38/113 (33%), Positives = 76/113 (67%), Gaps = 7/113 (6%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
F++++ GD+ VGK+S + R F ST+G+DF ++T+++DG+ V LQ+WDTAGQE
Sbjct: 462 FRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQE 521
Query: 227 RFRTITTAY------SVVLWELCL-STMLRMRRALKTLRIGLGTLKRMPVLML 364
RFR++ +Y +++++++C + LR+R ++T++ T + +P++++
Sbjct: 522 RFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDWIETIK--ESTERSIPIILV 572
Score = 61.3 bits (142), Expect = 7e-10
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD--LDSQRQVSK 420
S R + G +LVYDV E+SF +++WI I+E+ + +++GNK D + + V+K
Sbjct: 529 SYFRRADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMRISTPGSVAK 588
Query: 421 ERGEQLAIEYQIKFVETSAKDSLNVEYA 504
G +A + F+ETSA D N++ A
Sbjct: 589 TDGASMAAAMGVLFMETSALDGSNIDNA 616
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/72 (50%), Positives = 52/72 (72%)
Frame = +2
Query: 38 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 217
D +FK ++IGD GVGK+++L RF F+ ST+GI+F R +++D KKVKL +WDT
Sbjct: 4 DHVFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTC 63
Query: 218 GQERFRTITTAY 253
GQERFR++ +Y
Sbjct: 64 GQERFRSLVGSY 75
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/87 (39%), Positives = 59/87 (67%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 426
S R ++G +LVYD+T+ +SF ++++W+ +++ D+ +++GNK DL++ R+V KE
Sbjct: 74 SYYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEADREVRKEE 133
Query: 427 GEQLAIEYQIKFVETSAKDSLNVEYAF 507
GE A E+ + F+E SAK + VE AF
Sbjct: 134 GEAFAREFGLIFMEISAKTNEYVEEAF 160
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/69 (50%), Positives = 54/69 (78%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
FKL+ +G+ VGKTSI+ RF D+F+ ++ +TIGIDF +T+ L+ + ++LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 71
Query: 227 RFRTITTAY 253
RFR++ +Y
Sbjct: 72 RFRSLIPSY 80
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/87 (40%), Positives = 51/87 (58%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 426
S +R S ++VYD+TN SF W+ ++ DV +++GNK DL +RQVS E
Sbjct: 79 SYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTED 138
Query: 427 GEQLAIEYQIKFVETSAKDSLNVEYAF 507
GE+ A + + F+ETSAK NV+ F
Sbjct: 139 GEKKARDLNVMFIETSAKAGYNVKQLF 165
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 82.6 bits (195), Expect = 3e-16
Identities = 35/69 (50%), Positives = 54/69 (78%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
FKL+ +G+ VGKTS++ RF D+F+ ++ +TIGIDF +T+ L+ + V+LQ+WDTAGQE
Sbjct: 11 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 70
Query: 227 RFRTITTAY 253
RFR++ +Y
Sbjct: 71 RFRSLIPSY 79
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/87 (41%), Positives = 52/87 (59%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKER 426
S +R S ++VYD+TN SF WI ++ +DV M++GNK DL +RQV+ +
Sbjct: 78 SYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDE 137
Query: 427 GEQLAIEYQIKFVETSAKDSLNVEYAF 507
GE+ A E + F+ETSAK NV+ F
Sbjct: 138 GERKAKELNVMFIETSAKAGYNVKQLF 164
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 80.2 bits (189), Expect = 1e-15
Identities = 32/72 (44%), Positives = 53/72 (73%)
Frame = +2
Query: 38 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 217
D +FK ++IGD GVGK+++L RF+++ F+ +T+G++F + + +D KV+L++WDT
Sbjct: 4 DHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTC 63
Query: 218 GQERFRTITTAY 253
GQE FR+I AY
Sbjct: 64 GQENFRSIIRAY 75
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/84 (39%), Positives = 56/84 (66%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
R ++G +LVYD+T KSF +++ W+ ++ ++ ++ M++GNK DL + R V+ E GE
Sbjct: 77 RNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDLKAVRDVTTEEGEA 136
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
A + + F+ETSAK + +VE AF
Sbjct: 137 FAKKNGLTFMETSAKANKHVEKAF 160
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/101 (36%), Positives = 61/101 (60%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RGS G++LV+D+T+ KSFE +KNW+ I+ E +I+GNK DL+ +RQV+++ E
Sbjct: 83 RGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQDAEA 142
Query: 436 LAIEYQIKFVETSAKDSLNVEYAFSL*PGTKSENGKETGSE 558
A ++ETSA+D++ + AF E+ + +E
Sbjct: 143 YAESEGALYMETSAQDNVGISDAFESLTAKMIEHSRTRSTE 183
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/69 (39%), Positives = 47/69 (68%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
FK++L+G+ VGK+S++ RF E+ F+ +STI F+ +T++++ + L IWDTAGQE
Sbjct: 13 FKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQE 72
Query: 227 RFRTITTAY 253
++ + Y
Sbjct: 73 KYHALGPIY 81
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL-DGKKVKLQIWDT 214
D +FK++ +GDS VGKT L RF + F F +TIG+DF ++T+ + + + +Q+WDT
Sbjct: 200 DRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDT 259
Query: 215 AGQERFRTITTAY 253
AGQERFR+IT Y
Sbjct: 260 AGQERFRSITKQY 272
Score = 62.1 bits (144), Expect = 4e-10
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL---DSQRQVSKER 426
R + G++L++DVT+E+SF N++NWI ++ ++GNK DL D R
Sbjct: 274 RKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDLFGSDIARSAVYRA 333
Query: 427 GEQLAIEYQIKFVETSAKDSLNVE 498
E+LA+E++I F ETSA ++
Sbjct: 334 AEKLAVEFKIPFFETSAYTGFGID 357
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL-DGKKVKLQIWDTAGQE 226
K++++G+SG GKT++L F ++ F ++TIGIDFK + + L DG+ ++LQ+WDTAGQE
Sbjct: 8 KVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTAGQE 67
Query: 227 RFRTITTAY 253
RFR + AY
Sbjct: 68 RFRQLAPAY 76
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/86 (31%), Positives = 48/86 (55%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGE 432
+R + +LV D+++E E++ W I++N S +I+GNK DL S+++ R
Sbjct: 77 IRSARVALLVIDLSDENCVEHLIRWKGIIDKNKSDFTSTIIVGNKHDLVSEKR--SPRLT 134
Query: 433 QLAIEYQIKFVETSAKDSLNVEYAFS 510
+ E +++ETSAK N++ FS
Sbjct: 135 AIIRETNDEYIETSAKMRKNIKKLFS 160
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 78.2 bits (184), Expect = 6e-15
Identities = 33/70 (47%), Positives = 52/70 (74%)
Frame = +2
Query: 44 LFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 223
L K++++GDSGVGKTS++ ++ F+ + +TIG DF R +++D + V LQIWDTAGQ
Sbjct: 9 LLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQ 68
Query: 224 ERFRTITTAY 253
ERF+++ A+
Sbjct: 69 ERFQSLGVAF 78
Score = 57.6 bits (133), Expect = 9e-09
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASA-DVEK---MILGNKCDLDSQRQVSKE 423
RG+ +L +DVTN SF+++ +W AS D + ++LGNK DL+SQR VS +
Sbjct: 80 RGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVDLESQRAVSSK 139
Query: 424 RGEQ-LAIEYQIKFVETSAKDSLNVEYAF 507
R + + I + E SAK++LNVE AF
Sbjct: 140 RAQSWCQTKGNIPYYEVSAKEALNVEAAF 168
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 77.8 bits (183), Expect = 8e-15
Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEK----MILGNKCDLDSQRQV 414
S R S+G++ +YD TN +SFE+++NW++ N ++G K D+DSQRQV
Sbjct: 86 SYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSDMDSQRQV 145
Query: 415 SKERGEQLAIEYQIKFVETSAKDSLNVEYAFSL 513
+ E GE A +++KF+ETS++ NV AF +
Sbjct: 146 NYEEGEYFAKYHKMKFIETSSRTGDNVNEAFHM 178
Score = 74.1 bits (174), Expect = 1e-13
Identities = 36/70 (51%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL-DGKKVKLQIWDTAGQ 223
++L++IGDS VGK+S+L F+E T+G+DF R I+L G +VKLQ+WDTAGQ
Sbjct: 18 YRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQ 77
Query: 224 ERFRTITTAY 253
E+FR+IT +Y
Sbjct: 78 EKFRSITKSY 87
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 77.8 bits (183), Expect = 8e-15
Identities = 34/63 (53%), Positives = 48/63 (76%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 214
+D LFK++L+GD GVGKT ++ RF F +TIG+DF ++T+ +DGK+VKLQIWDT
Sbjct: 7 FDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDT 66
Query: 215 AGQ 223
AG+
Sbjct: 67 AGE 69
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 75.4 bits (177), Expect = 4e-14
Identities = 32/84 (38%), Positives = 53/84 (63%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
RG+ ++VYD+TN++SF+ KNW++ ++ AS ++ + GNK D+ ++R V E
Sbjct: 90 RGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEANA 149
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
A + + F+ETSAK S+NV F
Sbjct: 150 YAEDNALLFMETSAKTSMNVNDIF 173
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +2
Query: 41 CLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAG 220
C FKL+L+G+S VGK+S++ RF + F+ STIG F +T+ LD +K +IWDTAG
Sbjct: 18 CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAG 77
Query: 221 QERFRTITTAY 253
QER+ ++ Y
Sbjct: 78 QERYHSLAPMY 88
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 74.9 bits (176), Expect = 6e-14
Identities = 32/65 (49%), Positives = 48/65 (73%)
Frame = +2
Query: 32 TYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWD 211
+Y LFK ++IGD+GVGK+ +L +F++ F TIG++F R + +DGK++KLQ+WD
Sbjct: 2 SYAYLFKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWD 61
Query: 212 TAGQE 226
TAGQE
Sbjct: 62 TAGQE 66
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD-GKKVKLQIWDTAGQ 223
+K+L+IGD GVGKTSI+ RF + F+ ++ +TIG+DF ++ + +D V LQIWD +GQ
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Query: 224 ERFRTITTAY 253
+R+ +T Y
Sbjct: 72 DRYGVMTRVY 81
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 274 MLVYDVTNEKSFENIKNWIRNIEENAS-AD---VEKMILGNKCDLDSQRQVSKERGEQLA 441
++V D T E++ E W ++++ + AD V ++L NKCD+D++ K +
Sbjct: 89 IIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKCDIDNKLGDDKLYDLETN 148
Query: 442 IEYQIKFVETSAKDSLNVEYAF 507
+ F TSAK+S+ +E AF
Sbjct: 149 NGFVGSF-RTSAKESVGIEEAF 169
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 214
Y +FK ++IGD GVGK+ +L +F+E F TIG++F R I++ G+K+KLQIWDT
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
Query: 215 AG 220
AG
Sbjct: 68 AG 69
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD-GKKVKLQIWDTAGQ 223
+K+L+IGD GVGKTSI+ RF + F+ ++ +TIG+DF ++ + +D V LQIWD +GQ
Sbjct: 12 YKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
Query: 224 ERFRTITTAY 253
+R+ +T Y
Sbjct: 72 DRYGVMTRVY 81
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 274 MLVYDVTNEKSFENIKNWIRNIEENAS-AD---VEKMILGNKCDLDSQRQVSKERGEQLA 441
++V D T E++ E W ++++ + AD V ++L NKCD+D++ K +
Sbjct: 89 IIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAILLANKCDIDNKLGDDKLYDLETN 148
Query: 442 IEYQIKFVETSAKDSLNVEYAF 507
+ F TSAK+S+ +E AF
Sbjct: 149 NGFVGSF-RTSAKESVGIEEAF 169
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = +2
Query: 95 LFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAY 253
+ RF +D F+ +TIG+DF++ ++ +DG +VKL IWDTAGQERFRT+T +Y
Sbjct: 1 MLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSY 53
Score = 51.6 bits (118), Expect = 6e-07
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 17/104 (16%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD-VEKMILGNKCDL--------- 396
S RG+ G++ VYDVT+ SFE + +W++ ++ + D + KM++ NK D+
Sbjct: 52 SYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMVRKSRFCSI 111
Query: 397 -------DSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAF 507
R V++E G + A ++ F+E SAK V+ F
Sbjct: 112 FGLKNNFQPNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTF 155
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEE-NASADVEKMILGNKCDLDSQRQVSKERG 429
++ G ++VY +T++++F +I+N I S +V +++GNKCDL QRQV E G
Sbjct: 72 IKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNKCDLSHQRQVRSEEG 131
Query: 430 EQLAIEYQIKFVETSAKDSLNVEYAFS 510
LA + F E SAK++ NV F+
Sbjct: 132 LALAESWSCPFTECSAKNNQNVNVTFA 158
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
FK++++G GVGK+++ +F F + TI DF + I++DG+ L+I DTAG E
Sbjct: 4 FKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIE-DFYRKEIEVDGQPSVLEILDTAGTE 62
Query: 227 RFRTITTAY 253
+F ++ Y
Sbjct: 63 QFSSMRDLY 71
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 9/71 (12%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD---------GK 187
YD L K L GD GVGKTS L R++++ F FIST+GIDFK + + + G+
Sbjct: 4 YDYLIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRGQ 63
Query: 188 KVKLQIWDTAG 220
+V LQIWDTAG
Sbjct: 64 RVLLQIWDTAG 74
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 66.1 bits (154), Expect = 3e-11
Identities = 28/69 (40%), Positives = 48/69 (69%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
FK++++G++ VGKT + FRF F +TIG+DF+ R+ ++ + +++Q+WDTAGQE
Sbjct: 101 FKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQE 160
Query: 227 RFRTITTAY 253
R+R A+
Sbjct: 161 RYRQSIVAH 169
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENA---SADVEKMILGNKCDLDSQRQVSKER 426
R ++ VYDVT +SF ++ WI+ E++ ++V ++++GNKCD++ +VS +
Sbjct: 172 RNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCDVECTNRVSTDE 231
Query: 427 GEQLAIEYQIKFVETSAKDSLNVEYAFSL 513
+ A + ETSAK + ++ S+
Sbjct: 232 AQMFADRNNMALFETSAKLASEADHVESI 260
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKERG 429
++ G +LVY +T + +F ++ + I D MIL GNKCDL+ +R V K++G
Sbjct: 72 MKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCDLEDERVVGKDQG 131
Query: 430 EQLAIEYQIKFVETSAKDSLNVEYAF 507
+ LA ++ F+ETSAK +NV F
Sbjct: 132 QNLARQFGSAFLETSAKAKINVSEVF 157
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/69 (30%), Positives = 43/69 (62%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
+K++++G GVGK+++ +F + F + TI ++ + +++DG++ L+I DTAG E
Sbjct: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTE 62
Query: 227 RFRTITTAY 253
+F + Y
Sbjct: 63 QFTAMRDLY 71
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/57 (47%), Positives = 44/57 (77%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTA 217
F+L+ +G+ VGKTS++ RF D+F+ ++ +TIGIDF +T+ L+ + V+LQ+WDTA
Sbjct: 11 FELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQMWDTA 67
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 62.5 bits (145), Expect = 3e-10
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFEN---IKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKE 423
+RG G +LV+ VT KSFE + N + +++ + V +++ NK DL +QR VS++
Sbjct: 86 IRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPV--LLVANKVDLINQRVVSEQ 143
Query: 424 RGEQLAIEYQIKFVETSAKD-SLNVEYAF 507
G +LA + ++ ++ETSAK+ +NV+ AF
Sbjct: 144 EGRELAAQLKLMYIETSAKEPPVNVDAAF 172
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
+KL++IGD GVGK+S+ +F + F + TI D I+ ++DG V + + DTAGQE
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIE-DQYIQHCEIDGNWVIMDVLDTAGQE 76
Query: 227 RFRTITTAY 253
F + Y
Sbjct: 77 EFSAMREQY 85
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 62.5 bits (145), Expect = 3e-10
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFEN---IKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKE 423
+RG G +LV+ VT KSFE + N + +++ + V +++ NK DL +QR VS++
Sbjct: 86 IRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPV--LLVANKVDLINQRVVSEQ 143
Query: 424 RGEQLAIEYQIKFVETSAKD-SLNVEYAF 507
G +LA + ++ ++ETSAK+ +NV+ AF
Sbjct: 144 EGRELAAQLKLMYIETSAKEPPVNVDAAF 172
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/69 (39%), Positives = 41/69 (59%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
+KL++IGD GVGK+S+ +F + F + TI D I+ ++DG V + + DTAGQE
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIE-DQYIQHCEIDGNWVIMDVLDTAGQE 76
Query: 227 RFRTITTAY 253
F + Y
Sbjct: 77 EFSAMREQY 85
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 62.1 bits (144), Expect = 4e-10
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFEN---IKNWIRNIEENASADVEKMILGNKCDLDSQRQVS 417
SI +G+ +L+Y VTN++SF I ++ ++ NA A+ M++GNK D +S+R+VS
Sbjct: 5 SISKGN-AFILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVGNKKDEESKREVS 63
Query: 418 KERGEQLAIEYQIKFVETSAKDSLNVEYAF 507
G+++A + F+ETSAK++ N+ F
Sbjct: 64 SNSGQKVATNMECGFIETSAKNNENITELF 93
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 61.3 bits (142), Expect = 7e-10
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 268 GIMLVYDVTNEKSFENIKNWIRNIEEN-ASADVEKMILGNKCDLDSQRQVSKERGEQLAI 444
G +LVY + + KSFE N I + +I+GNK DL +QR V E GE+LA
Sbjct: 87 GFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGEELAR 146
Query: 445 EYQIKFVETSAKDSLNVEYAFSL 513
++ KFVE +A++S V F L
Sbjct: 147 QWDAKFVEITARESNRVHEVFEL 169
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K+ ++G VGK++++ RF+++ F + STI D + I + L++ DTAGQ+
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIFPERYESTIE-DQHSKHIAAFHRDYHLRVTDTAGQQE 73
Query: 230 FRTITTAYSV 259
+ + S+
Sbjct: 74 YTVFPRSCSL 83
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 208
FKL+ +G+ VGKTSI+ RF D+F+ ++ +TIGIDF +T+ L+ + ++LQIW
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKK----VKLQIWDTA 217
K++++GDSGVGKTSI++R A +TIG F + D + V+LQ+WDTA
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQVWDTA 113
Query: 218 GQERFRTITTAY 253
GQERFR + Y
Sbjct: 114 GQERFRCMVPMY 125
Score = 58.0 bits (134), Expect = 7e-09
Identities = 23/75 (30%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEENA-SADVEKMILGNKCDLDSQRQVSKERG 429
+R + ++VYDVT+ +FE+++ W+++++ ++ + D ++GNK DL +R+V++ G
Sbjct: 126 MRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKTDLVEKREVTEAEG 185
Query: 430 EQLAIEYQIKFVETS 474
+ +A + KF E S
Sbjct: 186 KAMAAKINAKFFELS 200
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
KL+++GD GKT +L FS+D F ++ T+ ++ + I++DGK+V+L +WDTAGQE
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65
Query: 230 F 232
+
Sbjct: 66 Y 66
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
KL+++GD GKT +L FS+D F ++ T+ ++ + I++DGK+V+L +WDTAGQE
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65
Query: 230 F 232
+
Sbjct: 66 Y 66
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEE-NASADVEKMILGNKCDLDSQRQVSKERG 429
+R G +LV+ V KSFEN+ N+ I S DV +++GNKCDL S R V
Sbjct: 72 MRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDL-SSRSVDFRTV 130
Query: 430 EQLAIEYQIKFVETSAKDSLNVEYAF 507
+ A Y I V+TSAK + V+ AF
Sbjct: 131 SETAKGYGIPNVDTSAKTRMGVDEAF 156
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/69 (31%), Positives = 41/69 (59%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
+KL+++GD GVGK+++ + ++ F + TI ++ + + +DG+ L I DTAGQE
Sbjct: 4 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 62
Query: 227 RFRTITTAY 253
+ + Y
Sbjct: 63 EYSAMRDQY 71
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEE-NASADVEKMILGNKCDLDSQRQVSKERG 429
+R G +LV+ V KSFEN+ N+ I S DV +++GNKCDL S R V
Sbjct: 75 MRTGEGFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDL-SSRSVDFRTV 133
Query: 430 EQLAIEYQIKFVETSAKDSLNVEYAF 507
+ A Y I V+TSAK + V+ AF
Sbjct: 134 SETAKGYGIPNVDTSAKTRMGVDEAF 159
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/69 (31%), Positives = 41/69 (59%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
+KL+++GD GVGK+++ + ++ F + TI ++ + + +DG+ L I DTAGQE
Sbjct: 7 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 65
Query: 227 RFRTITTAY 253
+ + Y
Sbjct: 66 EYSAMRDQY 74
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 58.0 bits (134), Expect = 7e-09
Identities = 23/71 (32%), Positives = 41/71 (57%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
FKL+L+GD G GKT+ + R F +++T+G++ + +++ +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQE 69
Query: 227 RFRTITTAYSV 259
+F + Y +
Sbjct: 70 KFGGLRDGYYI 80
Score = 35.5 bits (78), Expect = 0.041
Identities = 20/78 (25%), Positives = 43/78 (55%)
Frame = +1
Query: 274 MLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQ 453
++++DVT +++N+ NW R++ ++ ++ GNK D+ R+V K + +
Sbjct: 86 IIMFDVTARVTYKNVPNWHRDL-ARVCENIPIVLCGNKVDV-KDRKV-KAKTITFHRKKN 142
Query: 454 IKFVETSAKDSLNVEYAF 507
+++ + SAK + N E F
Sbjct: 143 LQYYDISAKSNYNFEKPF 160
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKERG 429
LR G ++V+ VT+ SFE +K I D +IL GNK DL+++R V++
Sbjct: 86 LRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEA 145
Query: 430 EQLAIEYQIKFVETSAKDSLNVEYAF 507
E+LA I ++E SAK NV+ AF
Sbjct: 146 EELAHRLSIPYLECSAKIRKNVDEAF 171
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +2
Query: 26 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 205
A + + +++++G GVGK+++ +F + F + TI D + +D KL+I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEI 69
Query: 206 WDTAGQERFRTITTAY 253
DTAGQE F T+ Y
Sbjct: 70 LDTAGQEEFSTMREQY 85
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKERG 429
LR G ++V+ VT+ SFE +K I D +IL GNK DL+++R V++
Sbjct: 86 LRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEA 145
Query: 430 EQLAIEYQIKFVETSAKDSLNVEYAF 507
E+LA I ++E SAK NV+ AF
Sbjct: 146 EELAHRLSIPYLECSAKIRKNVDEAF 171
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +2
Query: 26 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 205
A + + +++++G GVGK+++ +F + F + TI D + +D KL+I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEI 69
Query: 206 WDTAGQERFRTITTAY 253
DTAGQE F T+ Y
Sbjct: 70 LDTAGQEEFSTMREQY 85
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKERG 429
LR G ++V+ VT+ SFE +K I D +IL GNK DL+++R V++
Sbjct: 86 LRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVARHEA 145
Query: 430 EQLAIEYQIKFVETSAKDSLNVEYAF 507
E+LA I ++E SAK NV+ AF
Sbjct: 146 EELAHRLSIPYLECSAKIRKNVDEAF 171
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +2
Query: 26 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 205
A + + +++++G GVGK+++ +F + F + TI D + +D KL+I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEI 69
Query: 206 WDTAGQERFRTITTAY 253
DTAGQE F T+ Y
Sbjct: 70 LDTAGQEEFSTMREQY 85
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD---VEKMILGNKCDLDSQRQVSKE 423
L G+ + LVYDVTN KSFEN +W+ +++N + V+ +++GNK DL+ +R VS E
Sbjct: 106 LTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVVSVE 165
Query: 424 RGEQLAIEYQIKFVETSAKDSLNVEYAF 507
+ A + SAK V F
Sbjct: 166 AHKNFATSNDMMPTYVSAKTGDTVFLTF 193
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = +2
Query: 38 DCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGK-KVKLQIWDT 214
D + K++++GD GKTSI RF++++F+ S+ T+G+DF R I L + +V +Q+WD
Sbjct: 33 DKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDI 92
Query: 215 AGQ 223
GQ
Sbjct: 93 GGQ 95
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ D+F + ++ T+ ++ + + LDG V L +WDTAGQE
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQED 67
Query: 230 F 232
+
Sbjct: 68 Y 68
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ D+F + ++ T+ ++ + + LDG V L +WDTAGQE
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWDTAGQED 67
Query: 230 F 232
+
Sbjct: 68 Y 68
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQ 435
R + G +LV+ + +FEN+K +I +V +++GNK DL RQV +
Sbjct: 73 RTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDLAETRQVDESEAHN 132
Query: 436 LAIEYQIKFVETSAKDSLNVEYAF 507
A + +I + ETSA+ + NV F
Sbjct: 133 FAEKLKIPYFETSARLNQNVSEVF 156
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/69 (27%), Positives = 43/69 (62%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
+K++++G+ GVGK+++ ++ + F ++ +TI ++ + +D + +L+I DTAG E
Sbjct: 4 YKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYR-KLSKVDAENARLEILDTAGTE 62
Query: 227 RFRTITTAY 253
+F + Y
Sbjct: 63 QFTGMRETY 71
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 230 F 232
+
Sbjct: 64 Y 64
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 230 F 232
+
Sbjct: 64 Y 64
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 230 F 232
+
Sbjct: 64 Y 64
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 230 F 232
+
Sbjct: 64 Y 64
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 230 F 232
+
Sbjct: 64 Y 64
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGRPINLGLWDTAGQED 63
Query: 230 F 232
+
Sbjct: 64 Y 64
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQ+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQDD 63
Query: 230 F 232
+
Sbjct: 64 Y 64
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ +AF +I T+ D + +DG+ + L +WDTAGQ+
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVDGRPINLSLWDTAGQDD 63
Query: 230 F 232
+
Sbjct: 64 Y 64
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKK----VKLQIWDTA 217
K++++GDSGVGKTSI++R A +TIG F + D + V+LQ+WDTA
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQMWDTA 113
Query: 218 GQ 223
GQ
Sbjct: 114 GQ 115
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Frame = +1
Query: 274 MLVYDVTNEKSFENIKNWIRNIEENASA----DVEKMILGNKCDLDSQRQVSKERGEQLA 441
++VYDVT++ SF+ + + I + + +++GNK DL+ RQVS+ GE+LA
Sbjct: 83 VVVYDVTSQLSFQYAEGILERISRHEHVLCPREHRTLLVGNKTDLERYRQVSETEGERLA 142
Query: 442 IEYQIKFVETSA 477
+++ +F E SA
Sbjct: 143 SQHKAQFAECSA 154
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 48.0 bits (109), Expect = 7e-06
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNI--EENASADVEKMILGNKCDLDSQRQVSKERG 429
R G + V+ + + +SFE + I +N+ + V +++GNK D+ QR VS E
Sbjct: 87 RSGEGFICVFSILDMESFEATNEFREQILRVKNSDSSVPIVLVGNKGDMRDQRVVSAELC 146
Query: 430 EQLAIEYQIKFVETSAKDSLNVEYAF 507
Q A ++ +VETSAK NV+ F
Sbjct: 147 RQRAEQWGCHYVETSAKRRENVDKVF 172
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/68 (32%), Positives = 39/68 (57%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K++++G GVGK+++ +F D F + T ++ + + LDG++ + I DTAGQE
Sbjct: 19 KVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKVV-LDGEECSIDILDTAGQED 77
Query: 230 FRTITTAY 253
+ I Y
Sbjct: 78 YSAIRDNY 85
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/46 (41%), Positives = 33/46 (71%)
Frame = +2
Query: 35 YDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTI 172
Y LFK++L+ ++GVGKT ++ +F++ F +TIG+DF I+T+
Sbjct: 4 YKYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTV 49
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/82 (30%), Positives = 46/82 (56%)
Frame = +1
Query: 262 SMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLA 441
S GI+++Y V + +SF + + +E + + +++G+K D+ +R V+ G+QLA
Sbjct: 289 SNGIIIMYSVVDRQSFYHAAEIFKRLEHSREHNQPIVLVGSKKDMRVKRVVTSFEGQQLA 348
Query: 442 IEYQIKFVETSAKDSLNVEYAF 507
I F+E S+K + V AF
Sbjct: 349 RTLGIPFLEVSSKQNDCVFEAF 370
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63
Query: 230 F 232
+
Sbjct: 64 Y 64
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/61 (31%), Positives = 38/61 (62%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 60
Query: 230 F 232
+
Sbjct: 61 Y 61
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/64 (29%), Positives = 41/64 (64%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
KL+++GD+ GKTS+L +++ F ++ +T+ ++ + ++ +D K + ++DTAGQ
Sbjct: 6 KLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAV-SVHIDNKNYAVNLFDTAGQGN 64
Query: 230 FRTI 241
+ I
Sbjct: 65 YEQI 68
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/68 (32%), Positives = 39/68 (57%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
+ L++G G GKT+IL++ + ++ I TIG F + T+ +K+ L +WD GQ++
Sbjct: 19 RTLMLGLDGAGKTTILYKLKLNE-TVNTIPTIG--FNVETVTF--QKITLTVWDVGGQKK 73
Query: 230 FRTITTAY 253
R + Y
Sbjct: 74 IRALWKYY 81
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = +2
Query: 26 AKTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 205
A + + +++++G GVGK+++ +F + F + TI D + +D KL+I
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIE-DSYTKQCFVDEDLCKLEI 69
Query: 206 WDTAGQERFRTITTAY 253
DTAGQE F T+ Y
Sbjct: 70 LDTAGQEEFSTMREQY 85
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKCDLDSQRQVSKE 423
LR G ++V+ VT+ SFE +K I D +IL GNK DL+++R VS E
Sbjct: 86 LRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDFPIILVGNKADLENERHVSFE 143
>AF098999-2|AAC68728.3| 369|Caenorhabditis elegans Hypothetical
protein W04C9.5 protein.
Length = 369
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +1
Query: 277 LVYDVTNEKSFENIKNWI-RNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQ 453
+VY+V N +SF + + R + + +++GNK DL VSK G LA ++
Sbjct: 249 IVYNVDNRESFVCATDLLSRLLNRKIARGANIILIGNKIDLKRNTVVSKMEGACLAKVHK 308
Query: 454 IKFVETSAKDSLNVEYAFSL 513
FVE SA+ S+N+ +++
Sbjct: 309 CNFVEVSAQYSMNISELWTI 328
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/61 (31%), Positives = 37/61 (60%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
K +++GD VGKT +L ++ + F ++ T+ ++ + T + G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TAMIGGEPYTLGLFDTAGQED 63
Query: 230 F 232
+
Sbjct: 64 Y 64
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
++L++G G GKT+IL+R ++ I TIG F + ++ K +K Q+WD GQ
Sbjct: 18 RILILGLDGAGKTTILYRLQVGEV-VTTIPTIG--FNVEQVEY--KNLKFQVWDLGGQTS 72
Query: 230 FRTITTAY 253
R Y
Sbjct: 73 IRPYWRCY 80
>U50301-3|AAM29676.1| 370|Caenorhabditis elegans Hypothetical
protein F20D6.8 protein.
Length = 370
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Frame = +1
Query: 244 NSILRGSMGIMLV-YDVTNEKSF---ENIKNWIRNIEENASADVEKMILGNKCDLDSQRQ 411
NS R S + +V Y++ N +SF I I N ++ ++GNKCDL +
Sbjct: 237 NSPFRQSKTLYIVMYNMDNRQSFIYATQILERITLANLNNPVPLQLFLIGNKCDLKRNQV 296
Query: 412 VSKERGEQLAIEYQIKFVETSAKDSLNVE 498
+S G+ +A ++ F+E SA +N E
Sbjct: 297 ISTNEGKSVARTFKCDFLEVSALLGMNTE 325
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
++L++G GKT+IL++ +++ I T+G F + T+ K +K +WD GQ++
Sbjct: 15 RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVETVTY--KNIKFNVWDVGGQDK 69
Query: 230 FRTITTAY 253
R + Y
Sbjct: 70 IRPLWRHY 77
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
++L++G GKT+IL++ ++ I TIG F + T++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 230 FRTITTAY 253
R + Y
Sbjct: 74 IRPLWRHY 81
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
++L++G GKT+IL++ ++ I TIG F + T++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 230 FRTITTAY 253
R + Y
Sbjct: 74 IRPLWRHY 81
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
++L++G GKT+IL++ ++ I TIG F + T++ K + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--KNISFTVWDVGGQDK 73
Query: 230 FRTITTAY 253
R + Y
Sbjct: 74 IRPLWRHY 81
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 9/62 (14%)
Frame = +2
Query: 44 LFKLLLIGDSGVGKTSILFRFS---------EDAFNISFISTIGIDFKIRTIDLDGKKVK 196
L K++++GDSGVGKTS++ ++ F + +TIG DF R +++D + V
Sbjct: 9 LLKVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNIDDRTVT 68
Query: 197 LQ 202
LQ
Sbjct: 69 LQ 70
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +1
Query: 256 RGSMGIMLVYDVTNEKSFENIKNWIRNIEEN---ASADVEKMILGNKC 390
R ++ VYDVT +SF ++ WI+ E++ ++V ++++GNKC
Sbjct: 19 RNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKC 66
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
+L L+G GKT+ + + F I T+G F +R I +KL WD GQ R
Sbjct: 22 ELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVG--FNMRKITKGNVTIKL--WDIGGQPR 77
Query: 230 FRTITTAY 253
FR++ Y
Sbjct: 78 FRSMWERY 85
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
+L L+G GKT+ + + F I T+G F +R I +KL WD GQ R
Sbjct: 22 ELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVG--FNMRKITKGNVTIKL--WDIGGQPR 77
Query: 230 FRTITTAY 253
FR++ Y
Sbjct: 78 FRSMWERY 85
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +2
Query: 56 LLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFK 160
L+IG+SGVGK+S++ RF +D + +IG+ F+
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVDPERAVSIGVPFR 35
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 36.3 bits (80), Expect = 0.024
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
++L++G GKT+++ +F ++ + + T+G D I+T+ K +L +WD GQ+
Sbjct: 18 RILILGLDNAGKTTLMKKFLDEPTD-TIEPTLGFD--IKTVHF--KDFQLNLWDVGGQKS 72
Query: 230 FRTITTAY----SVVLWELCLSTMLRMRRALKTLRIGLG 334
R+ Y ++W + S R+ + + L+ LG
Sbjct: 73 LRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLG 111
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/89 (21%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Frame = +1
Query: 253 LRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASA--DVEKMILGNKCDLDSQRQVSKER 426
+ + +LV+ V + SF+ + + + I S ++ +++GNKCD+++ +++ +E
Sbjct: 84 IASASAFLLVFSVDDVTSFKEMSDIWQEICSRRSDLNELPIVVVGNKCDVEN-KKIYEET 142
Query: 427 GEQLA--IEYQIKFVETSAKDSLNVEYAF 507
+ + ++++E SAKD++ + F
Sbjct: 143 AKAFTNRLSSDVRYIEVSAKDNIRITDVF 171
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.041
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRF-SEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 226
++LL+G GKT+IL + SED +++ T G F ++T+ G ++L +WD GQ
Sbjct: 19 RILLLGLDNAGKTTILKQLSSEDVQHVT--PTKG--FNVKTVAAMG-DIRLNVWDIGGQR 73
Query: 227 RFRTITTAY 253
R + Y
Sbjct: 74 SIRPYWSNY 82
>Z81029-1|CAB02697.1| 465|Caenorhabditis elegans Hypothetical
protein C01A2.1 protein.
Length = 465
Score = 35.1 bits (77), Expect = 0.055
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
Frame = +1
Query: 238 NNNSILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD--LDSQRQ 411
N NSI G I +Y ++ S E +KNW + E ++ ++ N+CD + R+
Sbjct: 86 NKNSIYEGLPEITTLYRTLSQTSSEKMKNWRKLEEIRSTLTALFIVFTNECDEIANVLRE 145
Query: 412 VSK-------ERGEQLAIEYQIKF-VETSAKDSLNVEYAFSL*PGTKSENGKET 549
+++ G ++ Q+KF +E +D +++ +L G SE KET
Sbjct: 146 INRLEDYGLARNGIRVGYLEQMKFNLEEMFQDQKSMKGKITLNIGELSETMKET 199
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.055
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 229
+++L+G G GKTSI+ R + + I F I TI K +L WD G +
Sbjct: 371 RVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHY--KNYRLNFWDVGGLPK 428
Query: 230 FRTITTAY 253
R + Y
Sbjct: 429 LRHLWKHY 436
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 113 DAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYSVVLWE 271
+A S I + G+ IR+ D+DG+ +KL+ WD + T Y +++E
Sbjct: 427 EAAETSCIGSAGVPTNIRSADVDGQSIKLE-WDVPRCDETHTPIDGYEYIVYE 478
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 113 DAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYSVVLWE 271
+A S I + G+ IR+ D+DG+ +KL+ WD + T Y +++E
Sbjct: 427 EAAETSCIGSAGVPTNIRSADVDGQSIKLE-WDVPRCDETHTPIDGYEYIVYE 478
>AF040648-6|AAO91708.1| 908|Caenorhabditis elegans Lethal protein
805, isoform d protein.
Length = 908
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 113 DAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYSVVLWE 271
+A S I + G+ IR+ D+DG+ +KL+ WD + T Y +++E
Sbjct: 427 EAAETSCIGSAGVPTNIRSADVDGQSIKLE-WDVPRCDETHTPIDGYEYIVYE 478
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 113 DAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYSVVLWE 271
+A S I + G+ IR+ D+DG+ +KL+ WD + T Y +++E
Sbjct: 427 EAAETSCIGSAGVPTNIRSADVDGQSIKLE-WDVPRCDETHTPIDGYEYIVYE 478
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 113 DAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYSVVLWE 271
+A S I + G+ IR+ D+DG+ +KL+ WD + T Y +++E
Sbjct: 427 EAAETSCIGSAGVPTNIRSADVDGQSIKLE-WDVPRCDETHTPIDGYEYIVYE 478
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/78 (24%), Positives = 42/78 (53%)
Frame = +1
Query: 274 MLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQ 453
++++DVT +++N+ NW ++ ++ ++ GNK D+ R+V K + +
Sbjct: 20 IIMFDVTARVTYKNVPNWHHDL-ARVCENIPIVLCGNKVDV-KDRKV-KAKTITFHRKKN 76
Query: 454 IKFVETSAKDSLNVEYAF 507
+++ + SAK + N E F
Sbjct: 77 LQYYDISAKSNYNFEKPF 94
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 47 FKLLLIGDSGVGKTSILFRF-SEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQ 223
+K++++G GKT+IL+ + ++D + TIG + + ++ + + IWD GQ
Sbjct: 18 YKIIVVGLDNAGKTTILYNYVTKD--QVETKPTIGSNVE----EVSYRNLDFVIWDIGGQ 71
Query: 224 ERFRTITTAYSV 259
E R + Y V
Sbjct: 72 ESLRKSWSTYYV 83
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/28 (39%), Positives = 22/28 (78%)
Frame = +1
Query: 259 GSMGIMLVYDVTNEKSFENIKNWIRNIE 342
G++G +LV+D+TN++S EN+ W+ ++
Sbjct: 89 GAVGAILVHDLTNKRSEENLATWLTMLD 116
>Z37093-6|CAJ85783.1| 176|Caenorhabditis elegans Hypothetical
protein ZK669.5b protein.
Length = 176
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 32 TYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 154
+YD +FK L+ G VGK ++L F + N S +++ +D
Sbjct: 7 SYDRVFKFLIFGGKSVGKKTLLRSFCTEGDNESIWTSLTVD 47
>Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical
protein ZK669.5a protein.
Length = 212
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 32 TYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGID 154
+YD +FK L+ G VGK ++L F + N S +++ +D
Sbjct: 7 SYDRVFKFLIFGGKSVGKKTLLRSFCTEGDNESIWTSLTVD 47
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -3
Query: 647 ARCNATATSPACERRSASACGRHSYRPTDYSLPVSFPFSLLVPG*SENAYSTFNES 480
A +A T+PA R A G SY+PT Y+ + P + Y+TF+ S
Sbjct: 611 APSSAPFTAPA---RMIGATGLMSYQPTSYAANLQNSMQQSAPNSGHSGYATFDRS 663
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSED 115
+++LIGD G GKTS++ ED
Sbjct: 11 RIVLIGDEGCGKTSLVMSLLED 32
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 50 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIG--IDFKIRTIDLDGKKVKLQIWDTAGQ 223
K+LL+G SG GKTS+ + + S +G I+ + + G V L +WD GQ
Sbjct: 6 KVLLMGKSGSGKTSMRSIIFAN-YIARDCSRLGPTIEVEHAHVKFLGNMV-LHLWDCGGQ 63
Query: 224 ERF 232
E F
Sbjct: 64 ESF 66
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 298 EKSFENIKNWIRNIEENASADVEKMILGNKCDLDSQRQVSKERGEQLAIEYQIKFVETSA 477
++ F+ I+ WI+ E ADVE + NK D ++ K R ++LA + I T
Sbjct: 1241 DEQFDTIRQWIKERTEALEADVE---VSNKTKPDDIERMQK-RHDELASD--INDYHTIY 1294
Query: 478 KDSLN 492
+D LN
Sbjct: 1295 EDFLN 1299
>AC024202-8|AAK93869.2| 816|Caenorhabditis elegans Hypothetical
protein Y71H2B.5 protein.
Length = 816
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -1
Query: 523 SLAKVKMHIQHLTSLLLMSPQILSDILWLIVHLAPLIPVFENLSHTYFQVSFSQHQ 356
+L + + IQ++T +L M I +W AP IP+ N ++ V FS H+
Sbjct: 74 NLTGILIDIQNVTKILKMFDAIA---IWDFASAAPYIPILVNGTYPLDAVFFSGHK 126
>Z79753-2|CAB02087.1| 249|Caenorhabditis elegans Hypothetical
protein F20G2.2 protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 247 SILRGSMGIMLVYDVTNEKSFENIKNWIRNIEENA 351
++L + GI+L YDV EK N K IR +E N+
Sbjct: 83 TVLLNNAGILLPYDVEGEK---NRKTLIRQLETNS 114
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/51 (23%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +1
Query: 274 MLVYDVTNEKSFENIKNWIRNIEEN-ASADVEKMILGNKCDLDSQRQVSKE 423
++VY + ++ S++ + I + + ++ ++ GNK DL+ +R V+K+
Sbjct: 309 LVVYSIDSKSSWKQAMVALEMIRDRPGTRNLPTLVAGNKIDLERKRTVTKQ 359
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,677,358
Number of Sequences: 27780
Number of extensions: 377769
Number of successful extensions: 1458
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1397
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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