Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20004
(768 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 194 7e-50
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 2e-10
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 61 8e-10
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 56 4e-08
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 54 2e-07
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 54 2e-07
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 53 3e-07
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 50 3e-06
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 49 4e-06
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 48 6e-06
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 42 4e-04
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 42 7e-04
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 42 7e-04
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 41 0.001
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 40 0.002
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 39 0.005
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 38 0.007
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 38 0.007
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 38 0.007
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 38 0.012
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 38 0.012
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 37 0.021
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 36 0.048
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.048
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 35 0.063
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 34 0.15
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 34 0.15
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 34 0.15
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 34 0.15
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 34 0.15
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 33 0.34
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 33 0.34
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 32 0.44
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 32 0.59
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 31 1.0
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_51382| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_39252| Best HMM Match : PEX11 (HMM E-Value=6.4e-35) 31 1.4
SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8) 31 1.4
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 30 1.8
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 30 2.4
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 30 2.4
SB_34512| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_33470| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_26846| Best HMM Match : Pox_A32 (HMM E-Value=0.0014) 29 4.1
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 29 4.1
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 29 4.1
SB_16833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_44729| Best HMM Match : SET (HMM E-Value=0) 29 5.5
SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 29 5.5
SB_37382| Best HMM Match : Pkinase (HMM E-Value=1e-04) 29 5.5
SB_25779| Best HMM Match : DUF485 (HMM E-Value=5.1) 29 5.5
SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_41374| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12) 28 7.2
SB_59010| Best HMM Match : rve (HMM E-Value=0.0052) 28 9.5
SB_57062| Best HMM Match : Pox_A32 (HMM E-Value=0.006) 28 9.5
SB_43364| Best HMM Match : Pox_A32 (HMM E-Value=0.0078) 28 9.5
SB_37988| Best HMM Match : Rho_N (HMM E-Value=0.0007) 28 9.5
SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014) 28 9.5
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 9.5
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 28 9.5
SB_43431| Best HMM Match : DEAD (HMM E-Value=6.4) 28 9.5
SB_36342| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 28 9.5
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_31661| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023) 28 9.5
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 28 9.5
SB_12117| Best HMM Match : Pox_A32 (HMM E-Value=0.0083) 28 9.5
SB_10414| Best HMM Match : Rho_N (HMM E-Value=0.0015) 28 9.5
SB_4459| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_3818| Best HMM Match : Pox_A32 (HMM E-Value=0.022) 28 9.5
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 194 bits (473), Expect = 7e-50
Identities = 102/200 (51%), Positives = 118/200 (59%), Gaps = 1/200 (0%)
Frame = +2
Query: 128 VGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRSLVVL 307
VGDGGTGKTTFVKRHLTGEFEKKY+ATLGVEVHPL+F T+RG + L
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 308 ETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVDIKDRKVKAKT 487
+ +MFDVTSRVTYKNVPNWHRDL RVCE IPIVLCGNKVDIKDRKVKAK
Sbjct: 98 RDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLERVCENIPIVLCGNKVDIKDRKVKAKA 157
Query: 488 IVFHRKKICXXXXXXXXXXXXXKNPSCG*LEN*LVTVTLSLLPCLPFCHQKLQWDPQWQN 667
I FHRKK + P + L + ++Q DP
Sbjct: 158 ITFHRKKNLQYYDLSAKSNYNFEKPFLWLARKLVGDPNLEFVEMPALQPPEVQMDPNMAK 217
Query: 668 PIEK-IFRCTNTALPEEDED 724
E+ + NTALP+ED++
Sbjct: 218 QYEQDLNDAQNTALPDEDDE 237
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 63.7 bits (148), Expect = 2e-10
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = +2
Query: 110 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDK 289
+FK ++VGD G GKT+ ++R G F +T+GV+V V + + L C +
Sbjct: 11 SFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQ 70
Query: 290 RSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDIKD 466
+ + + ++FD+T+R T+ ++P W ++ + + I VL GNK D+K
Sbjct: 71 EKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLKG 130
Query: 467 RKVKAKT 487
K T
Sbjct: 131 ASRKVNT 137
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 61.3 bits (142), Expect = 8e-10
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVL-MCGTQPDK 289
FK VL GD GK++F+ R F +TLGV+ + + L + T +
Sbjct: 443 FKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQE 502
Query: 290 RSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDIK- 463
R + ++ D VL +++DVT ++ +V +W + C + +PI+LCGNK+DI+
Sbjct: 503 RFRSIAKSYFRKADGVL-LLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIRQ 561
Query: 464 DRKVKAKTIV 493
+ KT++
Sbjct: 562 SAAAENKTVI 571
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK +L+GD G GK++ + R F Y++T+GV+ + L +
Sbjct: 9 FKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQE 68
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKD 466
L T + + +++DV T+ ++ W ++ CEG+ +L GNK D+ D
Sbjct: 69 RFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLID 127
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 54.4 bits (125), Expect = 1e-07
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQP 283
M T KCV+VGDG GKT + + T +F +YV T+ + + + + L
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTA 59
Query: 284 DKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDI 460
+ L + + +V V F V S +++NV W ++ C P +L G +VD+
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQVDL 119
Query: 461 KD 466
+D
Sbjct: 120 RD 121
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
F+ V++G GG GKT+ VKR ++G F ++Y T+G V + L
Sbjct: 108 FRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAGSY 167
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRV-CEGIPIVLCGNKVDIKDR 469
++ TI + +++ V + + + R++V + + +P+VL GNK D+
Sbjct: 168 PFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDLVSE 227
Query: 470 KVKAKTIVFHRK 505
+++ T RK
Sbjct: 228 ELRQSTRAQMRK 239
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Frame = +2
Query: 86 TKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVL 265
T++ FK V +GD G GK++F+ R +++ + AT+GV+ + N GQ +
Sbjct: 888 TRLKTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVN-GQCIA 946
Query: 266 --MCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIV 436
+ T +R + + D +L + +DVT+ ++ N+ W + EG+ +
Sbjct: 947 IQLWDTAGQERFRSITKQYFRKADGIL-IFYDVTAESSFTNLKKWMVSVEEGAEEGVAKM 1005
Query: 437 LCGNKVDIKD 466
+ GNK D+ +
Sbjct: 1006 VLGNKTDLAE 1015
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 52.8 bits (121), Expect = 3e-07
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRS 295
KCV+VGDGG GKT+ + ++ F YV T H V + + C T +
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFCDT-AGQED 78
Query: 296 LVVLETDTIFKDNVLSVMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGNKVDIKD 466
L +V V F V S ++ NV + W ++ PI+L G D+KD
Sbjct: 79 FDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREFQPKAPIILVGTHSDLKD 136
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 50.4 bits (115), Expect = 2e-06
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Frame = +2
Query: 92 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVL-M 268
M D FK +LVGD GKT V++ G F T+GV+ + + L +
Sbjct: 1 MDDYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQI 60
Query: 269 CGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCG 445
T +R + ++ D V+ V +D+T++ +++++P W D R + + I + G
Sbjct: 61 WDTAGQERFRSITQSYYHNADGVI-VTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVG 119
Query: 446 NKVDIK-DRKV 475
NK D+ +RKV
Sbjct: 120 NKSDLSTNRKV 130
Score = 34.7 bits (76), Expect = 0.083
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 211 GCRSTSSSIPYEPRAIRFNVWDTAGQEKFGGLRDGYY 321
G T ++ + ++ +WDTAGQE+F + YY
Sbjct: 41 GVDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQSYY 77
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Frame = +2
Query: 110 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLM-----CG 274
TFK +++GD GKT R TG+F ++ T+GV+ N G+FV + G
Sbjct: 46 TFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELN-GEFVKLQLWDTAG 104
Query: 275 TQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVR--VCEGIPIVLCGN 448
+ ++S+V + N + M+D+T + +++ + W + +P +L GN
Sbjct: 105 QERFRKSMVCHYYRNV---NAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGN 161
Query: 449 KVDI 460
K D+
Sbjct: 162 KCDL 165
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 49.6 bits (113), Expect = 3e-06
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNR 250
++ K K M K V +GD G GK++ R + FE+KY T+G++ +
Sbjct: 150 HTRKGYKTITLMGGHKIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDD 209
Query: 251 GQFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCEG-- 424
+ L + L I ++FD+T+ ++++V +W + +VR G
Sbjct: 210 FEVRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVK-MVRDERGEK 268
Query: 425 IPIVLCGNKVDIKDRK 472
I++ GNK+D DR+
Sbjct: 269 AVIIIVGNKMDESDRR 284
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/124 (22%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
F+ +L+GD GK++ +++ G+F + T+GV+ H V + + +
Sbjct: 14 FRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQ 73
Query: 293 SLVVLETDTIFKDNV-LSVMFDVTSRVTYKNVPNWHRDLVRVCEGIPIV--LCGNKVDIK 463
T + +++ V +++D+T+R ++ NV +W+++ + E +V L G+K+D +
Sbjct: 74 ERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKIDKE 133
Query: 464 DRKV 475
++V
Sbjct: 134 SKRV 137
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 49.2 bits (112), Expect = 4e-06
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Frame = +2
Query: 98 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT 277
+D T K +VGDG GKT T F +Y+ T F+ + ++ +
Sbjct: 2 EDYVTLKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFD 61
Query: 278 QPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVP-NWHRDLVRVCEGIPIVLCGNKV 454
L ++ V FD+ R +++NV W +L G+P VL GNK
Sbjct: 62 SAGGEDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHFSPGVPRVLVGNKK 121
Query: 455 DIKDRK 472
D++ ++
Sbjct: 122 DLRPKQ 127
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 49.2 bits (112), Expect = 4e-06
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQP 283
M +K V++G GG GK+ + +TG+F +KY T+ + + + +L
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYRKEIEVDNNPSILEILDTA 59
Query: 284 DKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVD 457
+ I +++ + +R T+ ++ ++RV E +PIVL GNK D
Sbjct: 60 GTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSD 119
Query: 458 IKD-RKV---KAKTIVFHRKKIC 514
I D R+V AKT + K C
Sbjct: 120 IYDEREVSTSNAKTFLETNKDGC 142
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 48.4 bits (110), Expect = 6e-06
Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFV--LMCGTQPD 286
+K VL+GD G GK++ + R EF+ + +T+GVE G+ + + T
Sbjct: 13 YKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQV-EGKIIKAQVWDTAGQ 71
Query: 287 KRSLVVLETDTIFKDNVLSVM-FDVTSRVTYKNVPNWHRDLVRVCE-GIPIVLCGNKVDI 460
+R + T ++ V +V+ +D+T + T+++V W ++ + I ++L GNK D+
Sbjct: 72 ERYRAI--TSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDL 129
Query: 461 KDRKVKA 481
K + A
Sbjct: 130 KHLRAVA 136
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 48.0 bits (109), Expect = 8e-06
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 5/122 (4%)
Frame = +2
Query: 125 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRSLVV 304
L DGG GK++ + R + G+F+ + T+GVE + + L +
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 305 LETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDL-----VRVCEGIPIVLCGNKVDIKDR 469
L T ++ +++ V ++ N+ W ++ VR + P +L GNKVD++ R
Sbjct: 276 LRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEGR 335
Query: 470 KV 475
V
Sbjct: 336 AV 337
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 47.2 bits (107), Expect = 1e-05
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFH-----TNRGQFVLMCGT 277
FK ++VGD TGK +FVKR++ + Y T+GV+ T R Q L+ G
Sbjct: 19 FKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAG- 77
Query: 278 QPDKRSLVVLETDTIFKD-NVLSVMFDVTSRVTYKNVPNWHRDL-----VRVCEGIPIVL 439
Q S+ T +K + V+FD+ + T W +DL + + +P +L
Sbjct: 78 QERFSSM----TRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCIL 133
Query: 440 CGNKVDIKDRKVKAKTI 490
GNK D+ DR V + I
Sbjct: 134 VGNKSDLPDRPVDKEII 150
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 1/117 (0%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRS 295
K V+VGDG GKT + +F + YV T+ E + + Q L +
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 5989
Query: 296 LVVLETDTIFKDNVLSVMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGNKVDIK 463
L + +V+ + F + S + +N+P W ++ C +PI+L GNK D++
Sbjct: 5990 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 6046
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +2
Query: 107 PTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPD 286
PT K V VGD GKT+F+ T F ++A++ + + VL+C T P
Sbjct: 8 PTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCDT-PG 66
Query: 287 KRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGNKVDIK 463
+ +V + FD+ +R ++ N+ + W + +P VL GNK++++
Sbjct: 67 TMHPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLETSDVPKVLVGNKMELR 126
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 45.2 bits (102), Expect = 6e-05
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT--QPDK 289
K V+VGDGG GK+ F+ T F +Y+ T+ + + V + T Q D
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQEDY 66
Query: 290 RSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGNKVDIK 463
L L +V V FD+ SR +++N+ + W +L P +L GNK D++
Sbjct: 67 DRLRPLSYP---MTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKILVGNKRDLR 122
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 44.0 bits (99), Expect = 1e-04
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK +++GD GK++ ++R EF + T+GV+ F + + L +
Sbjct: 11 FKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEE 70
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPN-WHRDLVRVCEGIPI-VLCGNKVDIKD 466
L + ++FDV+ + ++ ++ + W + +V I +L GNK D KD
Sbjct: 71 KYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCDKKD 130
Query: 467 RKVKAKTI 490
+KV + I
Sbjct: 131 KKVSEEDI 138
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 44.0 bits (99), Expect = 1e-04
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQP 283
M +K V++G GG GK+ + +TG+F +KY T+ H QF M
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYHT----AGTEQFASM----- 51
Query: 284 DKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVD 457
R L + +++ + +R T+ ++ ++RV E +PIVL GNK D
Sbjct: 52 --RDLYIKNGQGFL------LVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSD 103
Query: 458 IKDRK 472
I D +
Sbjct: 104 IYDER 108
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 42.3 bits (95), Expect = 4e-04
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVF----HTNRGQFVLMCGTQ 280
FK +++G+ G GK+ V + F+ K+V T V ++ + + + N+ + + T
Sbjct: 351 FKTLIIGNSGVGKSCLVNKLKNPHFDLKFV-TSTVSMNDIFWEYFLYDNKKIKLTIGDTA 409
Query: 281 PDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCEG----IPIVLCGN 448
+R +L V ++FD+T +T+ + W DL R G I ++L GN
Sbjct: 410 GQERYFSILPAYFRGVQGVF-LVFDITVEITFLQLHRW-IDLARTTSGADSNIQLILVGN 467
Query: 449 KVDIKDRK 472
K D++D +
Sbjct: 468 KKDMEDNR 475
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 41.9 bits (94), Expect = 5e-04
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Frame = +2
Query: 98 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE--VHPLVFHTNRGQFVLMC 271
D + T K ++VG+ G GK++ + R F+ AT+GV+ V L N+ + +
Sbjct: 4 DVLTTLKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIW- 62
Query: 272 GTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNW--HRDLVRVCEGIPIVLCG 445
T +R + + V+ +++D SR T+ + W ++ + I +L G
Sbjct: 63 DTAGQERFRTLTPSYYRGAQGVI-LVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVG 121
Query: 446 NKVD 457
NK+D
Sbjct: 122 NKID 125
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 41.5 bits (93), Expect = 7e-04
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
+K V+VG GG GK+ + + F Y T+ R + + T +
Sbjct: 12 YKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQEE 71
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCE--GIPIVLCGNKVDIK 463
+ E + L ++F VT R +++ + ++ ++RV + P+++CGNK D++
Sbjct: 72 FSAMREQYMRSGEGFL-LVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNKSDLE 129
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 244 EPRAIRFNVWDTAGQEKFGGLRDGYYIQGQ 333
+ R ++ DTAGQE+F +R+ Y G+
Sbjct: 55 DERVAHLDILDTAGQEEFSAMREQYMRSGE 84
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 41.5 bits (93), Expect = 7e-04
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE--VHPLVFHTNRGQFVLM-CGTQP 283
FK VL+G+ GK++ V R + G+F + +T+G + +F + Q
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 284 DKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDI 460
SL + V++D+T++ T+ W ++L R I I L GNK D+
Sbjct: 82 RYHSLAPMYYRGA---QAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADL 138
Query: 461 KDRKV 475
+++
Sbjct: 139 ASKRM 143
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 211 GCRSTSSSIPYEPRAIRFNVWDTAGQEKFGGLRDGYYIQGQCAI 342
G + ++ + ++F +WDTAGQE++ L YY Q AI
Sbjct: 55 GAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAI 98
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 41.1 bits (92), Expect = 0.001
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Frame = +2
Query: 185 FEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRSLVVLETDTIFKD-NVLSVMFDVT 361
F Y+ T+GV+ + + + L + + T T ++ + + V++DVT
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTI-TSTYYRGTHGVIVVYDVT 60
Query: 362 SRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVDIKDRKV 475
S T+ NV W ++ + C+ + +L GNK D +KV
Sbjct: 61 SADTFVNVKRWLHEIDQNCDDVIRILVGNKDDCPSKKV 98
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +2
Query: 185 FEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTS 364
+ + Y++T+GV+ + L + + + + + V++DVT
Sbjct: 54 YTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD 113
Query: 365 RVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKDRKV 475
+ ++ NV W +++ R CE + +L GNK D+ +KV
Sbjct: 114 QESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTTKKV 151
Score = 34.3 bits (75), Expect = 0.11
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 232 SIPYEPRAIRFNVWDTAGQEKFGGLRDGYY 321
+I + + I+ +WDTAGQE+F + YY
Sbjct: 70 TIELDGKTIKLQIWDTAGQERFRTITSSYY 99
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRS 295
K VL GD GKT+F+ E E A E L +F+L
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQNELEGTPTAFANYE---LGLEVGSQKFLLDLWDTEGTTE 64
Query: 296 LVVLETDTIFKDNVLSVMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGNKVDIK 463
L T +++ + FD+++R T++ + + W + +V G VL GNK DI+
Sbjct: 65 YDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSIRVLIGNKNDIR 121
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV 223
FK VL+GD G GK+ + R+ EF AT+GVE+
Sbjct: 19 FKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVEL 55
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 250 RAIRFNVWDTAGQEKFGGLRDGYYIQGQCAI 342
+A +FN+WDTAGQE+F L YY AI
Sbjct: 7 KAYKFNIWDTAGQERFKSLAPLYYRDAAAAI 37
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 323 FKDNVLSVM-FDVTSRVTYKNVPNWHRDLVRV-CEGIPIVLCGNKVDIKDRK 472
++D +++ +D+T T+ ++ W R+L R + I I + GNK D D++
Sbjct: 30 YRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKCDKADQR 81
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 38.3 bits (85), Expect = 0.007
Identities = 30/132 (22%), Positives = 52/132 (39%)
Frame = +2
Query: 95 ADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCG 274
A+ P FK VL+G+ G GKT+ R F T+G++ Q L
Sbjct: 6 AERGPLFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVW 65
Query: 275 TQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKV 454
+ + + +MF+V + + + +W D C VL NK+
Sbjct: 66 DTAGVERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFCPDALKVLVANKI 125
Query: 455 DIKDRKVKAKTI 490
D+ D +V +++
Sbjct: 126 DL-DEQVTTESV 136
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 214
FK ++VGD GKT+FV+R++ G ++Y T+G
Sbjct: 23 FKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/47 (34%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = +2
Query: 344 VMFDVTSRVTYKNVPNWHRDL-VRVCEGIPIVLCGNKVDI-KDRKVK 478
+++D+T R +Y N+ W ++ EG+ ++L GNK+D+ DR+V+
Sbjct: 397 IVYDITKRESYNNLHKWLMEVETYASEGVHMILVGNKIDLDTDREVQ 443
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 344 VMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVD 457
++FDVT R +++ VP W + C IP+VL GNK D
Sbjct: 51 IVFDVTDRKSFERVPTWLDKVQEHCGHEIPVVLVGNKTD 89
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 37.5 bits (83), Expect = 0.012
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 220
FK VL+GD G GK+ + R EF + +T+GVE
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVE 47
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 37.5 bits (83), Expect = 0.012
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV-------HPL---VFHTNRGQFVL 265
K + +GD G GKT+ + ++ F ++V T+G++ HPL + RGQ +
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIH 167
Query: 266 MCGTQPDKRSLVVLETDTIFKDNV-LSVMFDVTSRVTYKNVPNW 394
+ + T F+D + ++FD+T ++ N+ NW
Sbjct: 168 LQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNW 211
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/93 (22%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVH-PLVFHTNRGQFVLMCGTQPDK 289
FK +++G+ GKT+F+ R+ F +V+T+G++ VF ++ + + T +
Sbjct: 22 FKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQE 81
Query: 290 RSLVVLETDTIFKDNV-LSVMFDVTSRVTYKNV 385
R + T ++ + +M+D+T+ +++ V
Sbjct: 82 RYRTI--TTAYYRGAMGFILMYDITNEESFQAV 112
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 35.5 bits (78), Expect = 0.048
Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Frame = +2
Query: 122 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLV-FHTNRGQFVLM-CGTQPDKRS 295
+LVGD GKT + ++ +F +KY AT+ + V R + L D
Sbjct: 236 ILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWDTSGHEDYDH 295
Query: 296 LVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIK 463
+ L + + +++ + FD++ T ++ W ++ +C P++L G K D++
Sbjct: 296 VRPLSYNNV---DIVLICFDISRPKTADSILEKWIIEVCDLCPNKPVLLVGCKQDLR 349
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 35.5 bits (78), Expect = 0.048
Identities = 28/105 (26%), Positives = 48/105 (45%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRS 295
+ +L+G GKT+ K L F+ + V+T G+EV P F + Q + +P R
Sbjct: 361 RIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVDIDQ---VKNWRPTSRK 417
Query: 296 LVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCEGIP 430
+ E F D++ +M D +R + H DL + + +P
Sbjct: 418 ALASE----FADDIARIMVDELTRKEPEE-KQQHDDLHQSQQSLP 457
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 35.1 bits (77), Expect = 0.063
Identities = 13/50 (26%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 338 LSVMFDVTSRVTYKNVPNWHRDL-VRVCEGIPIVLCGNKVDIKDRKVKAK 484
+ +++D+T T+ N+ W R++ E + ++ GNK D+ DR++ ++
Sbjct: 128 IMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSR 177
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 211
FK +L+GD G GKT + R F +++T+
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV 223
FK +++GD G GKT+ +KR++ F Y AT+ +
Sbjct: 672 FKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFNI 708
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 33.9 bits (74), Expect = 0.15
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = +2
Query: 125 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRSLVV 304
LVG +GKTTFV +G+F + + T+G + V N V G QP RS+
Sbjct: 25 LVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRK-VSKGNVTIKVWDIGGQPRFRSMWE 83
Query: 305 LETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCE--GIPIVLCGNKVDI 460
+ N + M D + N +L+ + GIPI++ GNK D+
Sbjct: 84 RYCRGV---NCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGNKKDL 134
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 214
+ V++G G GKT V R +TG F +Y TLG
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/62 (24%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +2
Query: 305 LETDTIFKDNV-LSVMFDVTSRVTYKNVPNWHRDL-VRVCEGIPIVLCGNKVDIKDRKVK 478
+ D I++D+ + +++D+T+ +++ NW R++ + + ++ GNK D++DR+
Sbjct: 76 IPADIIYEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQV 135
Query: 479 AK 484
+K
Sbjct: 136 SK 137
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 33.9 bits (74), Expect = 0.15
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Frame = +1
Query: 250 RAIRFNVWDTAGQEKFGGLRDGYY--IQGQCAISHV--RRNLSSYVQKCT*LA*RFGPCM 417
++++ +WDTAGQE+F + YY G + + R +S T P
Sbjct: 142 KSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASP-- 199
Query: 418 *RYPYCLV--RKQSGY*RQKS*GENYCFPQEKDLQYYDISAKSNYNFEKPFLWLARKLI 588
LV +K R+ + E F QE +L + + SA + N E+ FL +R ++
Sbjct: 200 -NIVIILVGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEGFLKCSRTIL 257
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +2
Query: 344 VMFDVTSRVTYKNVPNWHRDLVRVCE-GIPIVLCGNKVDI-KDRKV 475
+++D++SR T+ ++ NW D + I I+L GNK D+ DR+V
Sbjct: 173 LVYDISSRETFNSLTNWLTDARTLASPNIVIILVGNKKDLDADREV 218
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 344 VMFDVTSRVTYKNVPNWHRDL-VRVCEGIPIVLCGNKVDIK 463
+++D+ +TY+NV W ++L I I+L GNK D++
Sbjct: 11 LVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLR 51
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 214
N K+ D++ + + V++G G GK+ R LT F +Y +TLG
Sbjct: 3 NRRKSLDPNDNVRSLRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 250 RAIRFNVWDTAGQEKFGGLRDGYY 321
+ I+ +WDTAGQE+F + YY
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYY 26
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 256 IRFNVWDTAGQEKFGGLRDGYY 321
IR +WDTAGQE+F + YY
Sbjct: 34 IRLMLWDTAGQEEFDAITKAYY 55
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 31.9 bits (69), Expect = 0.59
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 256 IRFNVWDTAGQEKFGGLRDGYY 321
++ +WDTAGQE+F + YY
Sbjct: 95 VKLQIWDTAGQERFRTITQSYY 116
Score = 31.9 bits (69), Expect = 0.59
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 332 NVLSVMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDI-KDRKVKAKTIV 493
N + + +D+T T+KNV W D+ + E +L GNK D+ ++R+V + V
Sbjct: 120 NGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKLLVGNKKDLEREREVSLEDAV 175
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 268 VWDTAGQEKFGGLRDGYYIQGQCAI 342
+WDTAGQE+F L +Y C +
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCV 25
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 389 NWHRDLVRVCEGIPIVLCGNKVDIKDRK 472
+W+ ++ C PIVL G K+D++D K
Sbjct: 575 SWYPEVSHHCPNTPIVLVGTKLDLRDDK 602
>SB_51382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 526 CRSTANLFPVENNSFRLNFSVFNIHFVSAQDNRDTF 419
C AN F +N+F N + FN + ++ DN +TF
Sbjct: 49 CYDNANTFDDNSNTFNDNSNTFNDNSITFNDNSNTF 84
>SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 30.7 bits (66), Expect = 1.4
Identities = 28/116 (24%), Positives = 49/116 (42%)
Frame = -1
Query: 468 LSLISTLFPHKTIGIPSHTRTKSLCQLGTFLYVTREVTSNMTDSTLSLNIVSVSKTTKLL 289
+++ S + P T + S + S+ T + E +S T+ST S +V+ + L+
Sbjct: 566 VAISSLVLPTTTSVLTSSMESSSMATTSTTSTPSLE-SSMTTNSTTSTPAEAVA-ISSLV 623
Query: 288 LSGCVPHIKTNCPRFVWNTRGCTSTPRVATYFFSNSPVKCLLTKVVLPVPPSPTNT 121
L + ++ T TSTP + + +NS L V + P PT T
Sbjct: 624 LPSTTSVLTSSMESSSMATTSTTSTPSLESSMTTNSTTSTLAEAVAISSPVLPTTT 679
Score = 29.1 bits (62), Expect = 4.1
Identities = 25/116 (21%), Positives = 47/116 (40%)
Frame = -1
Query: 468 LSLISTLFPHKTIGIPSHTRTKSLCQLGTFLYVTREVTSNMTDSTLSLNIVSVSKTTKLL 289
+++ S++ P T + S + S+ T T + S+MT ++ + +V + +
Sbjct: 364 VAISSSVSPTTTSVLTSSMESSSMATTSTTS--TPSLESSMTTNSTTSTLVEAVALSSSV 421
Query: 288 LSGCVPHIKTNCPRFVWNTRGCTSTPRVATYFFSNSPVKCLLTKVVLPVPPSPTNT 121
L + ++ T TSTP + + SN+ L V P PT T
Sbjct: 422 LPTTTSVLTSSMESSSMATTSTTSTPSLESSMTSNNTTLTLAEAVATSSPVLPTTT 477
Score = 28.7 bits (61), Expect = 5.5
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Frame = -1
Query: 468 LSLISTLFPHKTIGIPSHTRTKSLCQLGTFLYVTRE--VTSNMTDSTLSLNIVSVSKTTK 295
+++ S + P T + S + S+ T + E +T+N T STL+ + S
Sbjct: 770 VAISSPVLPTTTSVLTSSMESSSIATTSTTSTPSLESSMTTNSTTSTLAEAVAISSPVLP 829
Query: 294 LLLSGCVPHIKTNCPRFVWNTRGCTSTPRVATYFFSNSPVKCLLTKVVLPVPPSPTNT 121
S ++++ T TSTP + + +NS L V + P PT T
Sbjct: 830 TTTSVLTSSMESSSIA----TTSTTSTPSLESSMTTNSTTSTLAEAVAISSPVLPTTT 883
Score = 27.9 bits (59), Expect = 9.5
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Frame = -1
Query: 468 LSLISTLFPHKTIGIPSHTRTKSLCQLGTFLYVTRE--VTSNMTDSTLSLNIVSVSKTTK 295
+++ S++ P T + S S+ T + E +T+N T STL+ + S
Sbjct: 719 VAISSSVSPTTTSVLTSSMEFSSMATTSTTTTPSLESSMTTNSTTSTLAEAVAISSPVLP 778
Query: 294 LLLSGCVPHIKTNCPRFVWNTRGCTSTPRVATYFFSNSPVKCLLTKVVLPVPPSPTNT 121
S ++++ T TSTP + + +NS L V + P PT T
Sbjct: 779 TTTSVLTSSMESSSIA----TTSTTSTPSLESSMTTNSTTSTLAEAVAISSPVLPTTT 832
>SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +2
Query: 284 DKRSLVVLETDTIFKDNVLSVMFDVTSRVTYK-------NVPNWHRDLVRVCEGIPIVLC 442
D S+V L T+T F+D + S + DV T + ++P W V E + + +C
Sbjct: 385 DTGSMVTLVTETFFRDQLQSALEDVQKNCTVELKGANGLDIPYW--GCSAVVEPLSVPIC 442
Query: 443 GN 448
GN
Sbjct: 443 GN 444
>SB_39252| Best HMM Match : PEX11 (HMM E-Value=6.4e-35)
Length = 239
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -1
Query: 288 LSGCVPHIKTNCPRFVWNTRGCTSTPRVATYFFSNSPVKCLLTKVVLPVPPSP 130
L+ V + +CP F+W GC P+ A F CL+ + P PSP
Sbjct: 186 LADAVNAVHWSCPGFLW--AGCL--PKSAIGLFGTISSVCLMYNYLYPAKPSP 234
>SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8)
Length = 796
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYV 202
F ++VG GKT F++ L G F KY+
Sbjct: 90 FNALIVGPTSCGKTRFIRGRLRGPFRGKYI 119
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 211
+K ++G GG GKT+ +K +F +K+V T+
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTV 45
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/126 (17%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKR--HLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDK 289
+ V++GD GKT + + + + +K++ ++ + + + +C
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANIIVDGKVYKLELCDVDNLD 79
Query: 290 RSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGNKVDIKD 466
+ +DT +V + F V ++++V N W+ ++ PI++ G K D+++
Sbjct: 80 TKISKPFSDT----DVFCLCFSVGDMDSFRHVENKWYAEVKNCSPNSPIIVVGTKTDLRE 135
Query: 467 RKVKAK 484
+ K +
Sbjct: 136 NENKKR 141
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 347 MFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVDIKDRKV 475
+F V + +++++ + + RV E +P+VL GNK D+ R V
Sbjct: 307 VFAVNNSKSFEDINQYREQIKRVKDAEEVPMVLVGNKCDLPQRTV 351
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN 247
+ +L+G GKT+ K L F+ V+T G+EV P F +
Sbjct: 83 RIMLIGQDRAGKTSLKKSLLGIPFDPGEVSTEGIEVDPSTFEVD 126
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 131 GDGGTGKTTFVKRHLTGEFEKKYVATL 211
G G GKT+ VKR G+F ++Y T+
Sbjct: 15 GGAGVGKTSIVKRFYCGKFSEEYEPTV 41
>SB_34512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1080
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKY 199
N HK M F ++VG GKT F+ L G F K+
Sbjct: 277 NLHKERGMDPKNIPFNALIVGPTSCGKTRFIVDRLRGPFRGKF 319
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 211
+ VL+G G GK+ + R TG F +Y TL
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTL 160
>SB_33470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 163 QKTFDWRVREKIRCDSGCRSTSSSIPYEPRAIRFNVWDTAGQEKFGGLRD 312
+K+ + RVR +I D TS S P E A NVW + + GGL D
Sbjct: 234 EKSTEDRVR-RISADEAKPPTSKSSPQETPAPAVNVWAKRMEAQKGGLPD 282
>SB_26846| Best HMM Match : Pox_A32 (HMM E-Value=0.0014)
Length = 509
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 187
N+ K ++ + +P F C++ G GKT ++ L G F
Sbjct: 99 NTKKMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 136
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 244 EPRAIRFNVWDTAGQEKFGGLRDGYYIQGQ 333
E R+++F +WD G +K L YY+ Q
Sbjct: 229 EHRSLKFTIWDVGGLQKLRPLWRHYYLNTQ 258
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 254 QFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVR-VCEGIP 430
Q + + KRS + + T K + +++D+T R ++ N+ W + + +
Sbjct: 31 QIAQLMAQELQKRSTINVSTAQGRKGWGILLVYDITCRKSFDNLQFWLESIRKNKLQYEE 90
Query: 431 IVLCGNKVDIKD 466
I+L GNK D+ D
Sbjct: 91 ILLVGNKCDVGD 102
>SB_16833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 463 FNIHFVSAQDNRDTFTYTDQISMPVRYIFVRNSRGYVEH 347
FN+ Q N+D T Q+ +RY++ R +R Y++H
Sbjct: 38 FNLKKAIDQVNKDRATVIQQLGRGLRYLYARRTR-YLDH 75
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN 247
+ +L+G GKT+ K F+ V+T G+EV P F +
Sbjct: 292 RIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVD 335
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +3
Query: 606 VCCHACPSATR----SYNGILNGRTQLKRSSDAQILLF 707
+CC +CP+A SY GI GR K + + LL+
Sbjct: 580 ICCESCPAAFHPECISYEGIPEGRFYCKDCVEGKSLLY 617
>SB_42285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1153
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 329 DNVLSVM-FDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVD 457
D L VM F+V + + K +PNW + G P++L G D
Sbjct: 431 DQTLYVMTFNVNNPMEIKLMPNWFFLVQTKAPGSPVILVGTNAD 474
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 344 VMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVDIKDRK 472
+++ +T R ++ + + RV + IPIVL GNK D++ ++
Sbjct: 14 IIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKR 58
>SB_37382| Best HMM Match : Pkinase (HMM E-Value=1e-04)
Length = 177
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 327 RTMCYQSCST*PLELRTKMYLTGIEIWSVYVKVSLLSC 440
R MC ++ P L+ + Y TG+++W++ V +L C
Sbjct: 30 RGMCCKAIKLAPEVLKGESYDTGVDMWAIGVIAYILLC 67
>SB_25779| Best HMM Match : DUF485 (HMM E-Value=5.1)
Length = 236
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +3
Query: 39 KSRFSYTITNKIAIKQRKWQMICPHSSVYW 128
+ RF+YT+ N I R ++CP++ W
Sbjct: 207 RRRFTYTVNNCHHIHDRTHTLLCPYNEELW 236
>SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2362
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 375 TKMYLTGIEIWSVYVKVSLLSCAETKWILKT 467
T Y + +W VS+LSCAE + +KT
Sbjct: 1029 TTAYSSSCPMWETQTLVSMLSCAEEIYTVKT 1059
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/29 (31%), Positives = 22/29 (75%)
Frame = +1
Query: 499 QEKDLQYYDISAKSNYNFEKPFLWLARKL 585
++ +L++Y+ SA++ N ++ F+ +ARK+
Sbjct: 62 EDNNLEFYEASARTGENVQQAFMAVARKI 90
>SB_41374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKY 199
F ++VG GKT FV L G F+ K+
Sbjct: 373 FNALIVGPASCGKTQFVVDRLRGPFQGKF 401
>SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12)
Length = 1970
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKY 199
N+ + ++ + +P F C++ G GKT ++ L G F +
Sbjct: 1649 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPFRNVF 1690
>SB_59010| Best HMM Match : rve (HMM E-Value=0.0052)
Length = 935
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 80 KTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKY 199
KT M F ++VG GKT FV L G F K+
Sbjct: 194 KTCGMDPKNVPFNALIVGPTSCGKTQFVVDRLRGPFRGKF 233
>SB_57062| Best HMM Match : Pox_A32 (HMM E-Value=0.006)
Length = 485
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 187
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 274 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 311
>SB_43364| Best HMM Match : Pox_A32 (HMM E-Value=0.0078)
Length = 759
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 187
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 358 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 395
>SB_37988| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 1018
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 187
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 847 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 884
>SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014)
Length = 399
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 207 VATYFFSNSPVKCLLTKVVLPVPPSPTNTHL 115
V +YF +N PV P PP P+ T L
Sbjct: 5 VGSYFSTNCPVTNCKVNADFPTPPDPSTTTL 35
>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 2629
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 187
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 2111 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 2148
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Frame = +2
Query: 296 LVVLETDTIFKDNVLSVM-FDVTSRVTYKNVPNWHRDLVRVC------EGIPIVLCGNKV 454
+++L + +KD +++ +DVTSR +++ + W ++ + + V+C NKV
Sbjct: 2 IMLLVRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKV 61
Query: 455 DIKDRKVK 478
D + R V+
Sbjct: 62 DSRKRLVE 69
>SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2306
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +1
Query: 142 YWQNNLCQKTFDWRVREKIRCDSGCRSTSSSIPYEPRAIRFNVWDTAGQEKFGGLRDGYY 321
YW N+ D V++ C +S P +P I W+T + G DG+Y
Sbjct: 976 YWFPNM-NSMIDTAVQQCFNCQVATKSHKEE-PIKPTQIPSKPWETISTDFGGPYPDGHY 1033
>SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1998
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 187
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 1756 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 1793
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEF 187
F+ +VG GG GK++ R+L EF
Sbjct: 2599 FRLCVVGSGGVGKSSVTIRYLKNEF 2623
>SB_43431| Best HMM Match : DEAD (HMM E-Value=6.4)
Length = 209
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYV 202
F ++VG GKT F+ L G F K+V
Sbjct: 74 FNALIVGPTSCGKTRFIVDRLRGPFRGKFV 103
>SB_36342| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 872
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 80 KTTKMADDMPTFKCVLVGDGGTGKTTFVK 166
K + ADD + V+ G GGTGK+ +K
Sbjct: 282 KYLEQADDYVPLRLVVSGTGGTGKSYMIK 310
>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 122 VLVGDGGTGKTTFVKRHLTGE 184
V++G+ GTGKTTF+ R L G+
Sbjct: 349 VMLGENGTGKTTFI-RMLAGK 368
>SB_31661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 187
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 457 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 494
>SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1787
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/60 (26%), Positives = 23/60 (38%)
Frame = +1
Query: 142 YWQNNLCQKTFDWRVREKIRCDSGCRSTSSSIPYEPRAIRFNVWDTAGQEKFGGLRDGYY 321
YW N+ D V + C +S P +P I W+T + G DG+Y
Sbjct: 1077 YWFPNM-NSMIDTAVDQSFNCQVATKSHKEE-PIKPTQIPSKPWETISTDFGGPYPDGHY 1134
>SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023)
Length = 1901
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 187
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 1282 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 1319
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN 247
+ +L+G GKT+ K L F+ + +T G+EV P F +
Sbjct: 363 RIMLIGQDRAGKTSLKKSLLGLRFDPQEESTEGIEVDPSRFEVD 406
>SB_12117| Best HMM Match : Pox_A32 (HMM E-Value=0.0083)
Length = 220
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 187
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 9 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 46
>SB_10414| Best HMM Match : Rho_N (HMM E-Value=0.0015)
Length = 916
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 187
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 705 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 742
>SB_4459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 104 YHLPFSLFYGYFIRDCI 54
Y P SLFYG +I DCI
Sbjct: 75 YEDPISLFYGSYIGDCI 91
>SB_3818| Best HMM Match : Pox_A32 (HMM E-Value=0.022)
Length = 766
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 187
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 457 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 494
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,150,546
Number of Sequences: 59808
Number of extensions: 586311
Number of successful extensions: 2112
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 1885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2065
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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