Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20004
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 217 9e-57
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 124 9e-29
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 61 7e-10
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 60 1e-09
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 60 1e-09
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 58 9e-09
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 57 1e-08
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 55 5e-08
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 55 6e-08
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 55 6e-08
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 54 8e-08
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 54 8e-08
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 54 1e-07
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 53 2e-07
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 53 2e-07
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 53 2e-07
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 51 8e-07
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 50 1e-06
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 50 1e-06
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 50 1e-06
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 50 1e-06
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 50 1e-06
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 50 2e-06
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 50 2e-06
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 50 2e-06
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 50 2e-06
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 50 2e-06
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 50 2e-06
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 50 2e-06
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 50 2e-06
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 50 2e-06
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 49 3e-06
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 49 3e-06
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 49 3e-06
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 49 4e-06
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 49 4e-06
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 48 6e-06
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 48 6e-06
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 48 7e-06
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 48 7e-06
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 47 2e-05
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 46 4e-05
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 45 5e-05
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 44 9e-05
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 44 9e-05
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 44 9e-05
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 43 2e-04
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 41 0.001
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 41 0.001
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 40 0.003
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 39 0.003
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 39 0.003
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 39 0.003
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 39 0.003
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 39 0.003
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 39 0.005
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 38 0.010
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 38 0.010
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 37 0.014
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 37 0.014
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 37 0.018
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 37 0.018
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 36 0.032
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 35 0.055
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 35 0.073
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 34 0.097
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 34 0.13
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 33 0.17
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 33 0.17
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 33 0.22
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 33 0.22
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 33 0.30
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 33 0.30
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 33 0.30
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 33 0.30
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 33 0.30
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 31 0.90
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 30 1.6
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 30 1.6
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 29 2.8
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 29 2.8
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 29 2.8
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 29 2.8
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 29 2.8
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 29 3.6
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 29 3.6
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 29 3.6
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 29 3.6
Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z27079-7|CAA81592.1| 293|Caenorhabditis elegans Hypothetical pr... 28 6.4
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 28 6.4
AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical ... 28 8.4
AF043697-2|AAB97556.1| 820|Caenorhabditis elegans Patched relat... 28 8.4
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 28 8.4
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 217 bits (529), Expect = 9e-57
Identities = 113/211 (53%), Positives = 127/211 (60%), Gaps = 1/211 (0%)
Frame = +2
Query: 98 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT 277
D +PTFK VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQ
Sbjct: 5 DGIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWD 64
Query: 278 QPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVD 457
+ L + +MFDVT+RVTYKNVPNWHRDL RVCE IPIVLCGNKVD
Sbjct: 65 TAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPIVLCGNKVD 124
Query: 458 IKDRKVKAKTIVFHRKKICXXXXXXXXXXXXXKNPSCG*LEN*LVTVTLSLLPCLPFCHQ 637
+KDRKVKAKTI FHRKK + P L L +
Sbjct: 125 VKDRKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLGDPNLEFVAMPALAPP 184
Query: 638 KLQWDPQWQNPIEK-IFRCTNTALPEEDEDL 727
++Q DP EK + LP++D+DL
Sbjct: 185 EVQMDPAMIAEYEKDLDNAAKADLPDDDDDL 215
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 124 bits (298), Expect = 9e-29
Identities = 67/125 (53%), Positives = 76/125 (60%)
Frame = +1
Query: 286 QEKFGGLRDGYYIQGQCAISHVRRNLSSYVQKCT*LA*RFGPCM*RYPYCLVRKQSGY*R 465
QEKFGGLRDGYYIQGQCAI + P L +
Sbjct: 2 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHHDLARVCENIPIVLCGNKVDVKD 61
Query: 466 QKS*GENYCFPQEKDLQYYDISAKSNYNFEKPFLWLARKLIGDGNLEFVAMPALLPPEVT 645
+K + F ++K+LQYYDISAKSNYNFEKPFLWLARKL+GD NLEFVAMPAL PPEV
Sbjct: 62 RKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLGDPNLEFVAMPALAPPEVQ 121
Query: 646 MGSSM 660
M +M
Sbjct: 122 MDPAM 126
Score = 112 bits (270), Expect = 2e-25
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +2
Query: 344 VMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVDIKDRKVKAKTIVFHRKK 508
+MFDVT+RVTYKNVPNWH DL RVCE IPIVLCGNKVD+KDRKVKAKTI FHRKK
Sbjct: 21 IMFDVTARVTYKNVPNWHHDLARVCENIPIVLCGNKVDVKDRKVKAKTITFHRKK 75
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 61.3 bits (142), Expect = 7e-10
Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK +++GD G GK++ + R F + Y+ T+GV+ N + L +
Sbjct: 11 FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQE 70
Query: 293 SLVVLETDTIFKD-NVLSVMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLCGNKVDIKDR 469
+ T T ++ + + V++DVT+ ++ NV W +++ C+ + VL GNK + +R
Sbjct: 71 RFRTI-TSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDSVQKVLVGNKCEENER 129
Query: 470 KV 475
+V
Sbjct: 130 RV 131
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 60.5 bits (140), Expect = 1e-09
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Frame = +2
Query: 92 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV--HPLVFHTNRGQF-- 259
M D K + +GD G GKT+F+ R+ F ++++T+G++ +V+ ++RG F
Sbjct: 1 MGDYDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGG 60
Query: 260 ----VLMCGTQPDKRSLVVLETDTIFKDNV-LSVMFDVTSRVTYKNVPNWHRDLV--RVC 418
VL+ + T F+D + ++FD+T+ ++ N+ +W L C
Sbjct: 61 RGQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYC 120
Query: 419 EGIPIVLCGNKVDIKDRK 472
E I++CGNK D+++R+
Sbjct: 121 EQPDIIICGNKADLENRR 138
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 60.5 bits (140), Expect = 1e-09
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 11/138 (7%)
Frame = +2
Query: 92 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV--HPLVFHTNRGQF-- 259
M D K + +GD G GKT+F+ R+ F ++++T+G++ +V+ ++RG F
Sbjct: 1 MGDYDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYKSSRGGFGG 60
Query: 260 ----VLMCGTQPDKRSLVVLETDTIFKDNV-LSVMFDVTSRVTYKNVPNWHRDLV--RVC 418
VL+ + T F+D + ++FD+T+ ++ N+ +W L C
Sbjct: 61 RGQRVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYC 120
Query: 419 EGIPIVLCGNKVDIKDRK 472
E I++CGNK D+++R+
Sbjct: 121 EQPDIIICGNKADLENRR 138
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 57.6 bits (133), Expect = 9e-09
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE--VHPLVFHTNRGQFVLMCGTQPD 286
FK V VGD GKT F+ R F+ + AT+GV+ V + NR + + T
Sbjct: 203 FKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAGQ 262
Query: 287 KRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCEGIPIVLC--GNKVDI 460
+R + + D V+ +MFDVTS ++ NV NW D VR V+C GNK+D+
Sbjct: 263 ERFRSITKQYFRKADGVV-LMFDVTSEQSFLNVRNW-IDSVRAGVDDATVMCLVGNKMDL 320
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK +L+GD G GK+ + R + + Y++T+GV+ + L +
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKDR 469
+ + + + V++D+T + T+ NV W +++ R CE + +L GNK D+ +
Sbjct: 72 RFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAK 131
Query: 470 K 472
+
Sbjct: 132 R 132
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 55.2 bits (127), Expect = 5e-08
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Frame = +2
Query: 110 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN-RGQFVLMCGTQPD 286
TF+ V+ GD GK++FV R + +F + +TLGV+ H + + R + + T
Sbjct: 461 TFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQ 520
Query: 287 KRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCE-GIPIVLCGNKVDIK 463
+R + ++ D + +++DV + ++ V +W + E IPI+L GNKVD++
Sbjct: 521 ERFRSLCKSYFRRADGAI-LVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMR 579
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 54.8 bits (126), Expect = 6e-08
Identities = 42/129 (32%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVL----MCGTQ 280
FK V++GD G GK+ + R + F+ + +TLG+E +R + L CG Q
Sbjct: 7 FKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCG-Q 65
Query: 281 PDKRSLVVLETDTIFKDNVLSVM-FDVTSRVTYKNVPNWHRDLVRVCE-GIPIVLCGNKV 454
RSLV + ++ + +++ +D+TSR ++ ++ +W DL R+ + I IVL GNK
Sbjct: 66 ERFRSLV----GSYYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKS 121
Query: 455 DIK-DRKVK 478
D++ DR+V+
Sbjct: 122 DLEADREVR 130
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 54.8 bits (126), Expect = 6e-08
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK +L+GD G GKT + R F +++T+G++ + L +
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDL-VRVCEGIPIVLCGNKVDIKDR 469
+ T + +++D+T+ ++ N+ W R++ E + ++ GNK D+ DR
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDR 129
Query: 470 KVKAK 484
+V ++
Sbjct: 130 RVVSR 134
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/121 (22%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK +L+GD G GKT + R F +++T+G++ + + L +
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDL-VRVCEGIPIVLCGNKVDIKDR 469
+ T + +++D+T+ +++N+ NW R++ + ++ GNK DI++R
Sbjct: 69 RFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEER 128
Query: 470 K 472
+
Sbjct: 129 R 129
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/121 (22%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK +L+GD G GKT + R F +++T+G++ + + L +
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDL-VRVCEGIPIVLCGNKVDIKDR 469
+ T + +++D+T+ +++N+ NW R++ + ++ GNK DI++R
Sbjct: 69 RFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEER 128
Query: 470 K 472
+
Sbjct: 129 R 129
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQP 283
M T KCV+VGDG GKT + + T +F +YV T+ + + + + L
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTA 59
Query: 284 DKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDI 460
+ L + + +V V F V + +++NV W ++ C P +L G +VD+
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLLVGTQVDL 119
Query: 461 KD 466
+D
Sbjct: 120 RD 121
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK V +G+ GKT+ + R + F+ Y AT+G++ + L +
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 71
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDL--VRVCEGIPIVLCGNKVDIKD 466
L I +V V++D+T+ ++ W D+ R C+ I IVL GNK D+ D
Sbjct: 72 RFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVI-IVLVGNKTDLAD 130
Query: 467 RK 472
++
Sbjct: 131 KR 132
Score = 35.5 bits (78), Expect = 0.042
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 226 SSSIPYEPRAIRFNVWDTAGQEKFGGLRDGYYIQGQCAI 342
S ++ E R IR +WDTAGQE+F L Y A+
Sbjct: 50 SKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSSVAV 88
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQP 283
M T KCV+VGDG GKT + + T +F +YV T+ + + + + L
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTAMIGGEPYTLGLFDTA 59
Query: 284 DKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDI 460
+ L + + +V V F V + +++NV W ++ C P +L G +VD+
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLLVGTQVDL 119
Query: 461 KD 466
+D
Sbjct: 120 RD 121
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Frame = +2
Query: 101 DMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQ 280
D K V+VGDG +GKT+ +R F+K Y TLG++ VL+
Sbjct: 32 DDKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWD 91
Query: 281 PDKRSLVVLETDTIFKD-NVLSVMFDVTSRVTYKNVPNWHRDLVRVCEG----IPIVLCG 445
+S+ D N++ +++DVT+ +++N +W + + + + +VL G
Sbjct: 92 IGGQSIAGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMG 151
Query: 446 NKVDIKDRKV 475
NK D+++R+V
Sbjct: 152 NKTDLEERRV 161
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFV--LMCGTQPD 286
FK VL+GD G GK+ + R EF + +T+GVE G+ V + T
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV-EGKTVKAQIWDTAGQ 70
Query: 287 KRSLVVLETDTIFKDNVLSVM-FDVTSRVTYKNVPNWHRDL-VRVCEGIPIVLCGNKVDI 460
+R + T ++ V +++ +D+ VTY+NV W ++L + I I+L GNK D+
Sbjct: 71 ERYRAI--TSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDL 128
Query: 461 K 463
+
Sbjct: 129 R 129
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 51.6 bits (118), Expect = 6e-07
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK VL+G+G GK++ V R + +F K+++T+ + Q L +
Sbjct: 13 FKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQE 72
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCEG--IPIVLCGNKVDIKD 466
L N + ++FD+T R +++ V NW + ++ C G I++ GNK+D+++
Sbjct: 73 KYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLE-IKTCLGNTAEILIVGNKIDLEE 131
Query: 467 RK 472
+
Sbjct: 132 ER 133
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 51.2 bits (117), Expect = 8e-07
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGQFVLMCGTQPDK 289
FK V +G+ GKT+ + R + F+ Y AT+G++ + ++ +R + + T +
Sbjct: 11 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 70
Query: 290 RSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCEG--IPIVLCGNKVDIK 463
R ++ + I V V++D+T+ ++ W D VR G + I+L GNK D+
Sbjct: 71 RFRSLIPS-YIRDSTVAVVVYDITNSNSFHQTSKWIDD-VRTERGSDVIIMLVGNKTDLS 128
Query: 464 DRK 472
D++
Sbjct: 129 DKR 131
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVH-PLVFHTNRGQFVLMCGTQPDK 289
FK +++G+ GKT+F+ R+ F +V+T+G++ VF ++ + + T +
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
Query: 290 RSLVVLETDTIFKDNV-LSVMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDIK 463
R + T ++ + +M+D+T+ ++ +V +W + E +VL GNK D+
Sbjct: 83 RYRTI--TTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMD 140
Query: 464 DRKV 475
+V
Sbjct: 141 SERV 144
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVH-PLVFHTNRGQFVLMCGTQPDK 289
FK +++G+ GKT+F+ R+ F +V+T+G++ VF ++ + + T +
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
Query: 290 RSLVVLETDTIFKDNV-LSVMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDIK 463
R + T ++ + +M+D+T+ ++ +V +W + E +VL GNK D+
Sbjct: 83 RYRTI--TTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMD 140
Query: 464 DRKV 475
+V
Sbjct: 141 SERV 144
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVH-PLVFHTNRGQFVLMCGTQPDK 289
FK +++G+ GKT+F+ R+ F +V+T+G++ VF ++ + + T +
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
Query: 290 RSLVVLETDTIFKDNV-LSVMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDIK 463
R + T ++ + +M+D+T+ ++ +V +W + E +VL GNK D+
Sbjct: 83 RYRTI--TTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMD 140
Query: 464 DRKV 475
+V
Sbjct: 141 SERV 144
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVH-PLVFHTNRGQFVLMCGTQPDK 289
FK +++G+ GKT+F+ R+ F +V+T+G++ VF ++ + + T +
Sbjct: 37 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 96
Query: 290 RSLVVLETDTIFKDNV-LSVMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDIK 463
R + T ++ + +M+D+T+ ++ +V +W + E +VL GNK D+
Sbjct: 97 RYRTI--TTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMD 154
Query: 464 DRKV 475
+V
Sbjct: 155 SERV 158
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVH-PLVFHTNRGQFVLMCGTQPDK 289
FK +++G+ GKT+F+ R+ F +V+T+G++ VF ++ + + T +
Sbjct: 23 FKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
Query: 290 RSLVVLETDTIFKDNV-LSVMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDIK 463
R + T ++ + +M+D+T+ ++ +V +W + E +VL GNK D+
Sbjct: 83 RYRTI--TTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMD 140
Query: 464 DRKV 475
+V
Sbjct: 141 SERV 144
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRS 295
K +++GD G GKT+ + +++ F +Y AT+G + + + L +
Sbjct: 11 KVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQER 70
Query: 296 LVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLV-----RVCEGIPIVLCGNKVDI 460
L + + FDVT+ ++K++ +W + + R + P VL GNKVD+
Sbjct: 71 FQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVDL 130
Query: 461 KDRK 472
+ ++
Sbjct: 131 ESQR 134
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Frame = +2
Query: 98 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT 277
+D ++K +++GD G GKT+ ++R + F Y T+GV+ + + V +
Sbjct: 7 NDKISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIW 66
Query: 278 QPDKRSLVVLETDTIFKD-NVLSVMFDVTSRVTYKNVPNWHRDL---VRVCEG--IPIVL 439
+ + T +KD + ++ D T T + W DL V + +G +P +L
Sbjct: 67 DISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAIL 126
Query: 440 CGNKVDIKDR 469
NK DI ++
Sbjct: 127 LANKCDIDNK 136
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRS 295
KCV+VGDG GKT + + T +F +YV T+ + + + + L +
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQED 60
Query: 296 LVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKVDIKD 466
L + + +V V F V + +++NV W ++ C P +L G +VD++D
Sbjct: 61 YDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLLVGTQVDLRD 118
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Frame = +2
Query: 98 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT 277
+D ++K +++GD G GKT+ ++R + F Y T+GV+ + + V +
Sbjct: 7 NDKISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIW 66
Query: 278 QPDKRSLVVLETDTIFKD-NVLSVMFDVTSRVTYKNVPNWHRDL---VRVCEG--IPIVL 439
+ + T +KD + ++ D T T + W DL V + +G +P +L
Sbjct: 67 DISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADGSPVPAIL 126
Query: 440 CGNKVDIKDR 469
NK DI ++
Sbjct: 127 LANKCDIDNK 136
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT-- 277
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
Query: 278 QPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKV 454
Q D L L + +V V F + + +++NV W+ ++ C PI+L G K
Sbjct: 61 QEDYDRLRPLSYP---QTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKA 117
Query: 455 DIKD 466
D+++
Sbjct: 118 DLRE 121
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT-- 277
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
Query: 278 QPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKV 454
Q D L L + +V V F + + +++NV W+ ++ C PI+L G K
Sbjct: 61 QEDYDRLRPLSYP---QTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKA 117
Query: 455 DIKD 466
D+++
Sbjct: 118 DLRE 121
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT-- 277
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
Query: 278 QPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKV 454
Q D L L + +V V F + + +++NV W+ ++ C PI+L G K
Sbjct: 61 QEDYDRLRPLSYP---QTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKA 117
Query: 455 DIKD 466
D+++
Sbjct: 118 DLRE 121
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT-- 277
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
Query: 278 QPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKV 454
Q D L L + +V V F + + +++NV W+ ++ C PI+L G K
Sbjct: 61 QEDYDRLRPLSYP---QTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKA 117
Query: 455 DIKD 466
D+++
Sbjct: 118 DLRE 121
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT-- 277
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAG 60
Query: 278 QPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKV 454
Q D L L + +V V F + + +++NV W+ ++ C PI+L G K
Sbjct: 61 QEDYDRLRPLSYP---QTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKA 117
Query: 455 DIKD 466
D+++
Sbjct: 118 DLRE 121
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/136 (25%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Frame = +2
Query: 92 MADD----MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE--VHPLVFHTNRG 253
M+DD + T K +++G+ G GK++ + R + F+ + AT+GV+ V + NR
Sbjct: 1 MSDDSSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRV 60
Query: 254 QFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVC--EGI 427
+ + T +R + + V+ V +DVTSR +++ + +W +++ C + I
Sbjct: 61 KLAIW-DTAGQERFRTLTPSYYRGAQGVICV-YDVTSRSSFEKLNHWMQEVDTYCTNDNI 118
Query: 428 PIVLCGNKVDIKDRKV 475
++ NK+D+ +R V
Sbjct: 119 IKMMVANKIDMPNRVV 134
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Frame = +2
Query: 92 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMC 271
M+ KCV+VGDG GKT + + T F +YV T+ + + + L
Sbjct: 1 MSSPSRQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTV-FDNYSAQMSLDGNVVNLGL 59
Query: 272 GTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGN 448
+ L + + +V + F V S V++ NV + W ++ + C P++L G
Sbjct: 60 WDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILVGT 119
Query: 449 KVDIKD 466
K+D++D
Sbjct: 120 KLDLRD 125
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 226 SSSIPYEPRAIRFNVWDTAGQEKFGGLRDGYYIQ 327
S+ + + + +WDTAGQE + LR Y Q
Sbjct: 45 SAQMSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQ 78
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQP 283
M +K V+VGDGG GK+ + + F ++Y T+ V + + T
Sbjct: 1 MTEYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAG 60
Query: 284 DKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVD 457
+ + + + L ++F V +++NV N+ + RV + +P+VL GNK D
Sbjct: 61 QEEYSAMRDQYMRTGEGFL-LVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCD 119
Query: 458 IKDRKVKAKTI 490
+ R V +T+
Sbjct: 120 LSSRSVDFRTV 130
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Frame = +2
Query: 92 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMC 271
M+ KCV+VGDG GKT + + T F +YV T+ + + + L
Sbjct: 1 MSSPSRQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTV-FDNYSAQMSLDGNVVNLGL 59
Query: 272 GTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGN 448
+ L + + +V + F V S V++ NV + W ++ + C P++L G
Sbjct: 60 WDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILVGT 119
Query: 449 KVDIKD 466
K+D++D
Sbjct: 120 KLDLRD 125
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 226 SSSIPYEPRAIRFNVWDTAGQEKFGGLRDGYYIQ 327
S+ + + + +WDTAGQE + LR Y Q
Sbjct: 45 SAQMSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQ 78
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 49.2 bits (112), Expect = 3e-06
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFV--LMCGTQPD 286
FK VL+GD G GK+ + R EF + +T+GVE G+ V + T
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISV-EGKTVKAQIWDTAGQ 70
Query: 287 KRSLVVLETDTIFKDNVLSVM-FDVTSRVTYKNVPNWHRDL-VRVCEGIPIVLCGNKVD 457
+R + T ++ V +++ +D+ VTY+NV W ++L + I I+ GNK D
Sbjct: 71 ERYRAI--TSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 49.2 bits (112), Expect = 3e-06
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQP 283
M +K V+VGDGG GK+ + + F ++Y T+ V + + T
Sbjct: 4 MTEYKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAG 63
Query: 284 DKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVD 457
+ + + + L ++F V +++NV N+ + RV + +P+VL GNK D
Sbjct: 64 QEEYSAMRDQYMRTGEGFL-LVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCD 122
Query: 458 IKDRKVKAKTI 490
+ R V +T+
Sbjct: 123 LSSRSVDFRTV 133
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 48.8 bits (111), Expect = 4e-06
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT-- 277
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAG 60
Query: 278 QPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKV 454
Q D L + + +V V F + + +++NV W+ ++ C PI+L G K
Sbjct: 61 QDDYDQFRHL---SFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKA 117
Query: 455 DIKD 466
D+++
Sbjct: 118 DLRE 121
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 226 SSSIPYEPRAIRFNVWDTAGQEKFGGLR 309
S+++ + R I ++WDTAGQ+ + R
Sbjct: 41 STNVMVDGRPINLSLWDTAGQDDYDQFR 68
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 48.8 bits (111), Expect = 4e-06
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT-- 277
M KCV+VGDG GKT + + T F +Y+ T+ V R + + T
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAG 60
Query: 278 QPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVCEGIPIVLCGNKV 454
Q D L + + +V V F + + +++NV W+ ++ C PI+L G K
Sbjct: 61 QDDYDQFRHL---SFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKA 117
Query: 455 DIKD 466
D+++
Sbjct: 118 DLRE 121
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 226 SSSIPYEPRAIRFNVWDTAGQEKFGGLR 309
S+++ + R I ++WDTAGQ+ + R
Sbjct: 41 STNVMVDGRPINLSLWDTAGQDDYDQFR 68
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 48.4 bits (110), Expect = 6e-06
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEF-EKKYVATLGVEV-HPLVFHTNRGQFVLMCGTQPDK 289
K +L+GD TGKT + R+ G F +++T+G++ + L+ ++ + + T +
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQE 63
Query: 290 RSLVVLETDTIFKD-NVLSVMFDVTSRVTYKNVPNWHRDLVRV-CEGIPIVLCGNKVDI 460
R V T + ++D + L +++D+ +R +++N NW + E + + L GNK D+
Sbjct: 64 RFRSV--TTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL 120
Score = 33.1 bits (72), Expect = 0.22
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 250 RAIRFNVWDTAGQEKFGGLRDGYYIQGQC-AISHVRRNLSSYVQKCT*LA*RFGPCM*RY 426
+ ++ +WDTAGQE+F + YY + + N +S+ L+
Sbjct: 50 KKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAV 109
Query: 427 PYCLVRKQSGY*RQKS*GENYCFPQEKDLQYYDISAKSNYNFEKPFLWLARKLI 588
LV + R E + + + + SAK+ +N ++ FL LA +++
Sbjct: 110 QVTLVGNKCDLPRAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLAERML 163
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 48.4 bits (110), Expect = 6e-06
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEF-EKKYVATLGVEV-HPLVFHTNRGQFVLMCGTQPDK 289
K +L+GD TGKT + R+ G F +++T+G++ + L+ ++ + + T +
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQE 63
Query: 290 RSLVVLETDTIFKD-NVLSVMFDVTSRVTYKNVPNWHRDLVRV-CEGIPIVLCGNKVDI 460
R V T + ++D + L +++D+ +R +++N NW + E + + L GNK D+
Sbjct: 64 RFRSV--TTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDL 120
Score = 33.1 bits (72), Expect = 0.22
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 250 RAIRFNVWDTAGQEKFGGLRDGYYIQGQC-AISHVRRNLSSYVQKCT*LA*RFGPCM*RY 426
+ ++ +WDTAGQE+F + YY + + N +S+ L+
Sbjct: 50 KKVKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAV 109
Query: 427 PYCLVRKQSGY*RQKS*GENYCFPQEKDLQYYDISAKSNYNFEKPFLWLARKLI 588
LV + R E + + + + SAK+ +N ++ FL LA +++
Sbjct: 110 QVTLVGNKCDLPRAVPTDEGKRLAEAYQIPFMETSAKTGFNVDRAFLGLAERML 163
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 48.0 bits (109), Expect = 7e-06
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQP 283
M FK V++G GG GK+ + ++ F +KY T+ + + + VL
Sbjct: 1 MREFKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIE-DFYRKEIEVDGQPSVLEILDTA 59
Query: 284 DKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVD 457
+ I V++ +TS+ T+ ++ N +VRV E +PI+L GNK D
Sbjct: 60 GTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNKCD 119
Query: 458 IK-DRKVKAK 484
+ R+V+++
Sbjct: 120 LSHQRQVRSE 129
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 48.0 bits (109), Expect = 7e-06
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE--VHPLVFHTNRGQFVLM-CGTQP 283
FK VLVGD G GKT V+R G F + T+GV+ + LV R + + G Q
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQE 70
Query: 284 DKRSLVVLETDTIFKD-NVLSVMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVD 457
R++ T + ++ N + + +D+T + ++ ++ W D+ + + +L G K D
Sbjct: 71 RFRTI----TQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCD 126
Query: 458 IKDRK 472
++D++
Sbjct: 127 LEDQR 131
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 47.6 bits (108), Expect = 1e-05
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG---VEVHPLVFHTNRGQFVLM--CGTQ 280
K V++GD G GKT+ + RH G + AT+G V + +R V + T
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQVWDTA 113
Query: 281 PDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKV 454
+R ++ D L +++DVT R T+++V W +DL R E + L GNK
Sbjct: 114 GQERFRCMVPMYMRNADAAL-IVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKT 172
Query: 455 DIKDRK 472
D+ +++
Sbjct: 173 DLVEKR 178
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 256 IRFNVWDTAGQEKF 297
+R VWDTAGQE+F
Sbjct: 105 VRLQVWDTAGQERF 118
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/114 (21%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK +L+GD G GKT + R F +++T+G++ + + L +
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDL-VRVCEGIPIVLCGNK 451
+ T + +++D+T+ +++N+ NW R++ + ++ GNK
Sbjct: 69 RFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 46.0 bits (104), Expect = 3e-05
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVL-MCGTQPDK 289
FK +++GD G GK+ + + +F T+GVE + + + L + T +
Sbjct: 12 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 71
Query: 290 RSLVVLETDTIFKDNVLSVM-FDVTSRVTYKNVPNWHRDLVRVCE-GIPIVLCGNKVDIK 463
R V T + ++ ++M +D+T R TY ++ +W D + I L GNK D++
Sbjct: 72 RFRAV--TRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLE 129
Query: 464 DRK 472
D++
Sbjct: 130 DQR 132
Score = 40.3 bits (90), Expect = 0.001
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Frame = +1
Query: 256 IRFNVWDTAGQEKFGGLRDGYY--IQGQCAISHVRRNLSSYVQKCT*LA*RFGPCM*RYP 429
I+ +WDTAGQE+F + YY G + + R S+Y + LA
Sbjct: 60 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRR-STYNHLSSWLADAKSLTNPNTA 118
Query: 430 YCLVRKQSGY*RQKS--*GENYCFPQEKDLQYYDISAKSNYNFEKPFLWLARKL---IGD 594
L+ ++ Q+ E F +E L + + SAK+ N E FL A+++ I D
Sbjct: 119 IFLIGNKADLEDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNIQD 178
Query: 595 GNLEFVAMPALLPPEVTMGSSMAEPN*K 678
G+L+ A + P+ + + AE N K
Sbjct: 179 GSLDLNAADTGVQPKQNLPRA-AENNGK 205
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 45.6 bits (103), Expect = 4e-05
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 9/126 (7%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVL----MCGTQ 280
FK V++GDGG GK+ + R F+ + TLGVE ++ + L CG Q
Sbjct: 7 FKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCG-Q 65
Query: 281 PDKRSLVVLETDTIFKDNVLS--VMFDVTSRVTYKNVPNWHRDLVRVCEGIP---IVLCG 445
+ RS++ + N L +++D+T R ++ ++ W DL + G P I+L G
Sbjct: 66 ENFRSII-----RAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQ--HGHPEMVIMLIG 118
Query: 446 NKVDIK 463
NK D+K
Sbjct: 119 NKSDLK 124
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 45.6 bits (103), Expect = 4e-05
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQP 283
M +K V++G GG GK+ + + G F +KY T+ V + Q +L
Sbjct: 1 MREYKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQV-EVDGQQCMLEILDTA 59
Query: 284 DKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRV--CEGIPIVLCGNKVD 457
+ + +++ +T++ T+ ++ + ++RV + +P++L GNK D
Sbjct: 60 GTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTDEVPMILVGNKCD 119
Query: 458 IKDRKVKAK 484
++D +V K
Sbjct: 120 LEDERVVGK 128
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 45.6 bits (103), Expect = 4e-05
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Frame = +2
Query: 92 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMC 271
M D FK VLVG+ G GKT V++ G F AT+GV+ + L
Sbjct: 1 MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQI 60
Query: 272 GTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGN 448
+ + + + +++DV+ + ++ +P W ++ + +L GN
Sbjct: 61 WDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGN 120
Query: 449 KVDIKDRK 472
KVD D +
Sbjct: 121 KVDKGDER 128
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK +L+GD G GKT + R F +++T+G++ + L +
Sbjct: 10 FKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDL-VRVCEGIPIVLCGNK 451
+ T + +++D+T+ ++ N+ W R++ E + ++ GNK
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNK 123
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 44.4 bits (100), Expect = 9e-05
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Frame = +2
Query: 83 TTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV--HPLVFHTN--R 250
+TK TFK ++VG+ GKT R G F + AT+GV+ V R
Sbjct: 91 STKTYKQKRTFKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLR 150
Query: 251 GQFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRD-----LVRV 415
Q G + ++S+V + N + ++DVT R ++ ++ W ++ LV
Sbjct: 151 VQLWDTAGQERYRQSIVAHYYRNV---NAVVFVYDVTCRESFNDLALWIKECEKHGLVGD 207
Query: 416 CEGIPIVLCGNKVDIK 463
E +P +L GNK D++
Sbjct: 208 SE-VPRILIGNKCDVE 222
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 44.4 bits (100), Expect = 9e-05
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Frame = +2
Query: 89 KMADDM--PTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFV 262
K D+M ++ V++G GKT ++R+L EF KY T+ ++H F
Sbjct: 8 KTEDEMCEERYRLVVLGSAKVGKTNIIRRYLYNEFSSKYKETI-EDLHSREFRIQGVPLP 66
Query: 263 L-MCGTQ---PDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCE--G 424
L + T PD R L + V SV DVTS ++ W R +
Sbjct: 67 LDILDTNFNFPDMRRLSIASASAFLL--VFSV-DDVTSFKEMSDI--WQEICSRRSDLNE 121
Query: 425 IPIVLCGNKVDIKDRKVKAKT 487
+PIV+ GNK D++++K+ +T
Sbjct: 122 LPIVVVGNKCDVENKKIYEET 142
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 44.4 bits (100), Expect = 9e-05
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRS 295
K V+VGDG GKT + +F YV T+ E + + Q L +
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65
Query: 296 LVVLETDTIFKDNVLSVMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGNKVDIK 463
L + +V+ + F + S + +N+P W ++ C +PI+L GNK D++
Sbjct: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLR 122
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 44.4 bits (100), Expect = 9e-05
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRS 295
K V+VGDG GKT + +F YV T+ E + + Q L +
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65
Query: 296 LVVLETDTIFKDNVLSVMFDVTSRVTYKNVPN-WHRDLVRVCEGIPIVLCGNKVDIK 463
L + +V+ + F + S + +N+P W ++ C +PI+L GNK D++
Sbjct: 66 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLR 122
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK VL+G+ GK++ V R + G+F + +T+G + +
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQE 79
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNKVDIKDR 469
L V++D+T++ +++ NW ++L R I + L GNK D+ ++
Sbjct: 80 RYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANK 139
Query: 470 K 472
+
Sbjct: 140 R 140
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 211 GCRSTSSSIPYEPRAIRFNVWDTAGQEKFGGLRDGYYIQGQCAI 342
G + ++ + I+F +WDTAGQE++ L YY Q AI
Sbjct: 53 GAAFLTQTVCLDDATIKFEIWDTAGQERYHSLAPMYYRGAQAAI 96
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK VL+G+ G GK+ + R EF K T+GVE + G+ V +
Sbjct: 9 FKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISV-EGKAVKVQIWDTAGM 67
Query: 293 SLVVLETDTIFKDNVLSVM-FDVTSRVTYKNVPNWHRDL-VRVCEGIPIVLCGNKVDI 460
+ ++ + +++ +D++ TY++V W + L E I I L GNK D+
Sbjct: 68 ERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDL 125
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 211 GCRSTSSSIPYEPRAIRFNVWDTAGQEKFGGLRDGYY 321
G + I E +A++ +WDTAG E+F YY
Sbjct: 42 GVEFATKIISVEGKAVKVQIWDTAGMERFRCGASSYY 78
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
FK +++GD G GK+ + + F+ + T+GVE + + Q L +
Sbjct: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQE 66
Query: 293 SLVVLETDTIFKDNVLSVM-FDVTSRVTYKNVPNWHRDLVRVC-EGIPIVLCGNKVDIKD 466
S + T + ++ +++ +D+T R T+ ++ +W D + + I+L GNK D++
Sbjct: 67 SFRSI-TRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEA 125
Query: 467 RK 472
R+
Sbjct: 126 RR 127
Score = 32.3 bits (70), Expect = 0.39
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 235 IPYEPRAIRFNVWDTAGQEKFGGLRDGYY 321
+ + + I+ +WDTAGQE F + YY
Sbjct: 48 VTIDGKQIKLQIWDTAGQESFRSITRSYY 76
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLM-CGTQ 280
+P +K V++GDGG GK++ + +F Y T +E + G +V+M
Sbjct: 15 LPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPT--IEDQYIQHCEIDGNWVIMDVLDT 72
Query: 281 PDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCE--GIPIVLCGNKV 454
+ + I ++F VT R +++ + ++RV + P++L NKV
Sbjct: 73 AGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLLVANKV 132
Query: 455 DIKDRKV 475
D+ +++V
Sbjct: 133 DLINQRV 139
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLM-CGTQ 280
+P +K V++GDGG GK++ + +F Y T +E + G +V+M
Sbjct: 15 LPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPT--IEDQYIQHCEIDGNWVIMDVLDT 72
Query: 281 PDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCE--GIPIVLCGNKV 454
+ + I ++F VT R +++ + ++RV + P++L NKV
Sbjct: 73 AGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEYPVLLVANKV 132
Query: 455 DIKDRKV 475
D+ +++V
Sbjct: 133 DLINQRV 139
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVL-MCGTQPDK 289
FK V+VGD GK+ + R F +++TLGV+ R + L + T +
Sbjct: 7 FKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGME 66
Query: 290 RSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPN-WHRDLVR-VCEGIPIVLCGNKVDI- 460
R + + V+ V +D+T+ +++N+ W +++ + ++L GNK D+
Sbjct: 67 RYRTIYNSYYHSAHGVMCV-YDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMD 125
Query: 461 KDRKV 475
++RKV
Sbjct: 126 QERKV 130
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/124 (21%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQP 283
M +K V++G+GG GK+ +++ G F Y AT+ L + + T
Sbjct: 1 MKEYKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLSKVDAENARLEILDTAG 60
Query: 284 DKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRV-CEGIPIVLCGNKVDI 460
++ + ET + ++F + T++N+ D++ + + +P++L GNK D+
Sbjct: 61 TEQFTGMRETYYRTAQGFV-LVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDL 119
Query: 461 KDRK 472
+ +
Sbjct: 120 AETR 123
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/138 (20%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Frame = +2
Query: 98 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGT 277
+D KC+ VG+ GKT+ + + T + YV T + +V ++ L
Sbjct: 5 EDEKCLKCIFVGNAAVGKTSMIVSYTTNVYPHNYVPT-AFDNFSVVVLVDKKPIRLQLHD 63
Query: 278 QPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVP-NWHRDLVRVCEGIPIVLCGNKV 454
+ S L +V +++ V ++++V +W+ ++ + G ++L G +
Sbjct: 64 TAGQSSFDTLRPLCYTDADVFVIVYSVVDLQSFEDVSHHWYPEVTKRNPGTKLILVGTQA 123
Query: 455 DIKDRKVKAKTIVFHRKK 508
D + +V+ T+ R K
Sbjct: 124 D-QRWQVRGNTVTQLRGK 140
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 2/139 (1%)
Frame = +2
Query: 74 SHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRG 253
S+ T A + V+VG GG GK+ + + F + Y T+ F +
Sbjct: 5 SNSATTAAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCF-VDED 63
Query: 254 QFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCE--GI 427
L + + + + ++F VT R +++ V H + R+ +
Sbjct: 64 LCKLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF 123
Query: 428 PIVLCGNKVDIKDRKVKAK 484
PI+L GNK D+++ + A+
Sbjct: 124 PIILVGNKADLENERHVAR 142
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 2/139 (1%)
Frame = +2
Query: 74 SHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRG 253
S+ T A + V+VG GG GK+ + + F + Y T+ F +
Sbjct: 5 SNSATTAAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCF-VDED 63
Query: 254 QFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCE--GI 427
L + + + + ++F VT R +++ V H + R+ +
Sbjct: 64 LCKLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF 123
Query: 428 PIVLCGNKVDIKDRKVKAK 484
PI+L GNK D+++ + A+
Sbjct: 124 PIILVGNKADLENERHVAR 142
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 39.1 bits (87), Expect = 0.003
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 2/139 (1%)
Frame = +2
Query: 74 SHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRG 253
S+ T A + V+VG GG GK+ + + F + Y T+ F +
Sbjct: 5 SNSATTAAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCF-VDED 63
Query: 254 QFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCE--GI 427
L + + + + ++F VT R +++ V H + R+ +
Sbjct: 64 LCKLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF 123
Query: 428 PIVLCGNKVDIKDRKVKAK 484
PI+L GNK D+++ + A+
Sbjct: 124 PIILVGNKADLENERHVAR 142
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Frame = +2
Query: 98 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFV-LMCG 274
D + T K V+VG+ G GKT + L FE + T+G++ + N GQ + L
Sbjct: 2 DTIKTVKVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLW 61
Query: 275 TQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVR-VCEGIPIVLCGNK 451
+ L I V ++ D++ +++ W + + + ++ GNK
Sbjct: 62 DTAGQERFRQLAPAYIRSARVALLVIDLSDENCVEHLIRWKGIIDKNKSDFTSTIIVGNK 121
Query: 452 VDIKDRK 472
D+ K
Sbjct: 122 HDLVSEK 128
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 2/135 (1%)
Frame = +2
Query: 74 SHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRG 253
S+ T A + V+VG GG GK+ + + F + Y T+ F +
Sbjct: 5 SNSATTAAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCF-VDED 63
Query: 254 QFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCE--GI 427
L + + + + ++F VT R +++ V H + R+ +
Sbjct: 64 LCKLEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDRDDF 123
Query: 428 PIVLCGNKVDIKDRK 472
PI+L GNK D+++ +
Sbjct: 124 PIILVGNKADLENER 138
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 220
FK VLVGD G GKT V+R G F + T+GV+
Sbjct: 11 FKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVD 46
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 220
FK +++GD G GK++ + R F + Y+ T+GV+
Sbjct: 11 FKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVD 46
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 37.1 bits (82), Expect = 0.014
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Frame = +2
Query: 92 MADD--MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPL-VFHTNRGQFV 262
M+DD + + VL+GD G GKT+ V L E+ L + P V N +
Sbjct: 1 MSDDETLADVRIVLIGDEGCGKTSLVMSLLEDEWVDAVPRRLDRVLIPADVTPENVTTSI 60
Query: 263 LMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVCEG----IP 430
+ + + + +V E I + NV+ V++ VT T + L+R G P
Sbjct: 61 VDLSIKEEDENWIVSE---IRQANVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETP 117
Query: 431 IVLCGNKVD 457
++L GNK D
Sbjct: 118 VILVGNKSD 126
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +2
Query: 92 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV--HPLVFHTNRGQF 259
M D K + GD G GKT+F+ R+ F ++++T+G++ +V+ ++RG F
Sbjct: 1 MGDYDYLIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGF 58
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 104 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 211
M KCV+VGDG GKT + + T F +Y+ T+
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 36
Score = 31.1 bits (67), Expect = 0.90
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 226 SSSIPYEPRAIRFNVWDTAGQEKFGGLRD 312
S+++ + R I +WDTAGQE + LR+
Sbjct: 41 SANVMVDGRPINLGLWDTAGQEDYDRLRE 69
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 36.7 bits (81), Expect = 0.018
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRS 295
K ++VG GG GK+ + + EF ++Y T V + + T +
Sbjct: 19 KVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKVVLDGEECSIDILDTAGQEDY 78
Query: 296 LVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRV---CEGIPIVLCGNKVDIKD 466
+ + + + V F + +++ + ++RV +PIVL GNK D++D
Sbjct: 79 SAIRDNYYRSGEGFICV-FSILDMESFEATNEFREQILRVKNSDSSVPIVLVGNKGDMRD 137
Query: 467 RKV 475
++V
Sbjct: 138 QRV 140
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 265 NVWDTAGQEKFGGLRDGYYIQGQ 333
++ DTAGQE + +RD YY G+
Sbjct: 68 DILDTAGQEDYSAIRDNYYRSGE 90
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 35.9 bits (79), Expect = 0.032
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 220
FK +L+GD G GK+ + R + + Y++T+GV+
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVD 47
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 35.1 bits (77), Expect = 0.055
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 220
FK V +G+ GKT+ + R + F+ Y AT+G++
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGID 47
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 34.7 bits (76), Expect = 0.073
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE--VHPLVFHTNRGQFVLMCGTQPDK 289
K ++G GK+ V R F ++Y +T+ + H FH + + L +
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIFPERYESTIEDQHSKHIAAFHRD---YHLRVTDTAGQ 71
Query: 290 RSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLVRVC--EGIPIVLCGNKVDIK 463
+ V N +++ + R +++ N + +VR IPIV+ GNK D+
Sbjct: 72 QEYTVFPRSCSLDINGFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTDLS 131
Query: 464 DRKV 475
++V
Sbjct: 132 TQRV 135
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 34.3 bits (75), Expect = 0.097
Identities = 18/98 (18%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
++ +++GD GK++ ++ G+ + T+GV+ + + G V + +
Sbjct: 18 YRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAGQ 77
Query: 293 SLVVLETDTIFKDNV-LSVMFDVTSRVTYKNVPNWHRD 403
T + ++++V + ++D T+R ++++V NW ++
Sbjct: 78 EKFRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVKE 115
Score = 32.7 bits (71), Expect = 0.30
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 256 IRFNVWDTAGQEKFGGLRDGYY 321
++ +WDTAGQEKF + YY
Sbjct: 67 VKLQLWDTAGQEKFRSITKSYY 88
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 92 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 220
M D FK VLV + G GKT V++ G F AT+GV+
Sbjct: 1 MEDYKYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVD 43
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 220
F+ V +G+ GKT+ + R + F+ Y AT+G++
Sbjct: 11 FELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGID 46
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 33.5 bits (73), Expect = 0.17
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRS 295
K V+VGD TGKT+ + + +F Y T+ + + H + + + + +
Sbjct: 6 KLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTV-FDNWAVSVHIDNKNYAVNLFDTAGQGN 64
Query: 296 LVVLETDTIFKDNVLSVMFDVTSRVTYKNV-PNWHRDLVRVC-EGIPIVLCGNKVDIKDR 469
+ + NV V F + R T ++ W ++ + + +PI+L G K D+ D
Sbjct: 65 YEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIMLVGTKNDLVDD 124
Query: 470 KVKAKTI 490
T+
Sbjct: 125 ADSRNTV 131
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 33.1 bits (72), Expect = 0.22
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Frame = +2
Query: 56 YNHE*--NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHP 229
Y+H+ NSH+ T ++ + K +VG +GKT V R+LTG + G
Sbjct: 215 YHHDAFVNSHEWT-LSRSISEMKLGIVGTSQSGKTALVHRYLTGTYTPDESPEGGRFKKE 273
Query: 230 LVFHTNRGQFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDL- 406
+V GQ L+ ++ L V + D V+ V F+V S +Y ++ ++
Sbjct: 274 VVI---EGQSHLLLIRDEGQQHLDVQFCQWV--DAVVFV-FNVCSIQSYDSIQALAHEMS 327
Query: 407 -VRVCEGIPIVLCGNKVDIKDRKVKAKT 487
R +P++L G K I +++ + T
Sbjct: 328 KYRNISDLPLILVGTKDHISEKRARVIT 355
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 229 SSIPYEPRAIRFNVWDTAGQEKFGGLRDGYYIQGQCAI 342
+S+ + ++ +WDTAGQE+F L YY Q I
Sbjct: 24 TSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGVI 61
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Frame = +2
Query: 167 RHLTGEFEKKYVATLGVE--VHPLVFHTNRGQFVLMCGTQPDKRSLVVLETDTIFKDNVL 340
R + F+ + AT+GV+ V + NR + + T +R + + V+
Sbjct: 3 RFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIW-DTAGQERFRTLTPSYYRGAQGVI 61
Query: 341 SVMFDVTSRVTYKNVPNWHRDLVRVC--EGIPIVLCGNKVDI 460
V +DVTSR +++ + +W +++ C + I ++ NK+D+
Sbjct: 62 CV-YDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDM 102
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 214
K V++GD G GKT+ + RH G + AT+G
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIG 86
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 77 HKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKY 199
++ T + T+K +VGD GTGK++ + + +T E++ +
Sbjct: 226 NEMTNASTSHKTYKIYVVGDTGTGKSSLISQLITSEYKNAF 266
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 32.7 bits (71), Expect = 0.30
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNR 250
NSH+ T ++ + K +VG +GKT V R+LTG + G +V
Sbjct: 66 NSHEWT-LSRSISEMKLGIVGTSQSGKTALVHRYLTGTYTPDESPEGGRFKKEVVI---E 121
Query: 251 GQFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDL--VRVCEG 424
GQ L+ ++ L V + D V+ V F+V S +Y ++ ++ R
Sbjct: 122 GQSHLLLIRDEGQQHLDVQFCQWV--DAVVFV-FNVCSIQSYDSIQALAHEMSKYRNISD 178
Query: 425 IPIVLCGNKVDIKDRKVKAKT 487
+P++L G K I +++ + T
Sbjct: 179 LPLILVGTKDHISEKRARVIT 199
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 32.7 bits (71), Expect = 0.30
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Frame = +2
Query: 56 YNHE*--NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHP 229
Y+H+ NSH+ T ++ + K +VG +GKT V R+LTG + G
Sbjct: 215 YHHDAFVNSHEWT-LSRSISEMKLGIVGTSQSGKTALVHRYLTGTYTPDESPEGGRFKGE 273
Query: 230 LVFHTNRGQFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDL- 406
+V GQ L+ ++ L V + D V+ V F+V S +Y ++ ++
Sbjct: 274 VVI---EGQSHLLLIRDEGQQHLDVQFCQWV--DAVVFV-FNVCSIQSYDSIQALAHEMS 327
Query: 407 -VRVCEGIPIVLCGNKVDIKDRKVKAKT 487
R +P++L G K I +++ + T
Sbjct: 328 KYRNISDLPLILVGTKDHISEKRARVIT 355
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 32.7 bits (71), Expect = 0.30
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNR 250
NSH+ T ++ + K +VG +GKT V R+LTG + G +V
Sbjct: 66 NSHEWT-LSRSISEMKLGIVGTSQSGKTALVHRYLTGTYTPDESPEGGRFKKEVVI---E 121
Query: 251 GQFVLMCGTQPDKRSLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDL--VRVCEG 424
GQ L+ ++ L V + D V+ V F+V S +Y ++ ++ R
Sbjct: 122 GQSHLLLIRDEGQQHLDVQFCQWV--DAVVFV-FNVCSIQSYDSIQALAHEMSKYRNISD 178
Query: 425 IPIVLCGNKVDIKDRKVKAKT 487
+P++L G K I +++ + T
Sbjct: 179 LPLILVGTKDHISEKRARVIT 199
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 256 IRFNVWDTAGQEKFGGLRDGYYIQGQCAI 342
I+FNVWD GQ+K L YY Q I
Sbjct: 57 IKFNVWDVGGQDKIRPLWRHYYTGTQALI 85
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 30.3 bits (65), Expect = 1.6
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = +2
Query: 125 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRSLVV 304
LVG +GKTTFV +G+F + + T+G + + N + G QP RS+
Sbjct: 25 LVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKIT-KGNVTIKLWDIGGQPRFRSMWE 83
Query: 305 LETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLV--RVCEGIPIVLCGNKVDI 460
+ N + M D + N L+ + IP+++ GNK D+
Sbjct: 84 RYCRGV---NAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDL 134
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 30.3 bits (65), Expect = 1.6
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = +2
Query: 125 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRSLVV 304
LVG +GKTTFV +G+F + + T+G + + N + G QP RS+
Sbjct: 25 LVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKIT-KGNVTIKLWDIGGQPRFRSMWE 83
Query: 305 LETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDLV--RVCEGIPIVLCGNKVDI 460
+ N + M D + N L+ + IP+++ GNK D+
Sbjct: 84 RYCRGV---NAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDL 134
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical
protein F57F4.4 protein.
Length = 2090
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 478 GENYCFPQEKDLQYYDISAKSNYNFEKPFL 567
G+ Y PQ+++L+ Y SA +N N P++
Sbjct: 383 GQTYNPPQDEELEVYCCSASNNCNVNNPYI 412
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 478 GENYCFPQEKDLQYYDISAKSNYNFEKPFL 567
G+ Y PQ+++L+ Y SA +N N P++
Sbjct: 383 GQTYNPPQDEELEVYCCSASNNCNVNNPYI 412
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYV 202
K +++GD G GKT+ + ++ G+ +YV
Sbjct: 11 KVIILGDSGVGKTSLMNQYEIGDLMNQYV 39
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 220
FK +++GD G GK+ + + F+ + T+GVE
Sbjct: 7 FKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVE 42
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 29.5 bits (63), Expect = 2.8
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Frame = +2
Query: 113 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKR 292
F+ +VG +GKT V R+LTG + G +V GQ L+ ++
Sbjct: 31 FRIGIVGTSQSGKTALVHRYLTGTYTPDESPEGGRFKKEVVI---EGQSHLLLIRDEGQQ 87
Query: 293 SLVVLETDTIFKDNVLSVMFDVTSRVTYKNVPNWHRDL--VRVCEGIPIVLCGNKVDIKD 466
L V + D V+ V F+V S +Y ++ ++ R +P++L G K I +
Sbjct: 88 HLDVQFCQWV--DAVVFV-FNVCSIQSYDSIQALAHEMSKYRNISDLPLILVGTKDHISE 144
Query: 467 RKVKAKT 487
++ + T
Sbjct: 145 KRARVIT 151
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 116 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV 223
K V+ GD GKT KR F+++YVAT ++V
Sbjct: 45 KIVIRGDRNVGKTCLWKRLQGLSFQEEYVATEEIQV 80
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = -1
Query: 396 CQLGTFLYVTREVTSNMTDSTLSLNIVSVSKTTKLLLSGCVPHIKTNCPRFVWNTRGCTS 217
C+L T + + RE L++ + + ++T L+S V + N PRFV++ S
Sbjct: 844 CELRTQMELDRETVERYL---LNITVTAGAQTDYALVSITVLDVNDNVPRFVYD-----S 895
Query: 216 TPRVATYFFSNSPVKCLLTKVV 151
+ TYF + S V T+V+
Sbjct: 896 DLGLTTYFGAVSSVANAFTRVL 917
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = -1
Query: 396 CQLGTFLYVTREVTSNMTDSTLSLNIVSVSKTTKLLLSGCVPHIKTNCPRFVWNTRGCTS 217
C+L T + + RE L++ + + ++T L+S V + N PRFV++ S
Sbjct: 988 CELRTQMELDRETVERYL---LNITVTAGAQTDYALVSITVLDVNDNVPRFVYD-----S 1039
Query: 216 TPRVATYFFSNSPVKCLLTKVV 151
+ TYF + S V T+V+
Sbjct: 1040 DLGLTTYFGAVSSVANAFTRVL 1061
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 222 TSTPRVATYFFSNSPVKCLLTKVVLPVPPSPTNT 121
T+TP T+ N+ K KV P PP PT T
Sbjct: 135 TTTPLTTTFTLENATTK---EKVTTPTPPPPTTT 165
>Z81138-2|CAB03473.1| 2265|Caenorhabditis elegans Hypothetical protein
W05B2.4 protein.
Length = 2265
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 608 LLPCLPFCHQKLQWDPQWQNPIEKIFRCTNTALPEEDEDL 727
+L L FC++K++ P+W I+ C NT DE L
Sbjct: 2079 ILVHLDFCYEKVE--PRWMEQIKLWIECPNTQHLVSDEQL 2116
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical
protein ZK593.4 protein.
Length = 1477
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 128 VGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVL 265
+ G TG+ + H+T + +LGV +H + H N G+FV+
Sbjct: 552 IAPGLTGRQRDLFHHMTTAANPHLLRSLGVPIHSV--HQNAGEFVI 595
>Z27079-7|CAA81592.1| 293|Caenorhabditis elegans Hypothetical
protein T05G5.7 protein.
Length = 293
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 18 DFALERVKSRFSYTITNKIAIKQRKWQMI 104
DFAL +++RFSYTI N ++++ M+
Sbjct: 188 DFALLHLRARFSYTIANLSWLERKAASML 216
>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -3
Query: 154 CFASTTISYQ-YTLECGHIIC 95
C A T IS Y LECGH++C
Sbjct: 807 CTAETGISNDFYRLECGHVMC 827
>AL110487-1|CAB54424.1| 610|Caenorhabditis elegans Hypothetical
protein Y39E4B.1 protein.
Length = 610
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 71 NSHKTTKMADDMPTFKCVLVGDGGTGKTTFVK 166
N H + D + V++G+ GTGKTT +K
Sbjct: 368 NFHLDVEAGDFSDSEIIVMLGENGTGKTTMIK 399
>AF043697-2|AAB97556.1| 820|Caenorhabditis elegans Patched related
family protein 11 protein.
Length = 820
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 272 GTQPDKRSLVVLETDTIFKD--NVLSVMFDVTSRVTYKNVPNW 394
G + D RSL+ L F N+LS + R +Y N+P W
Sbjct: 519 GIRGDNRSLIFLPQYVNFDKTMNILSTLVGEKYRPSYDNLPTW 561
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 27.9 bits (59), Expect = 8.4
Identities = 25/85 (29%), Positives = 42/85 (49%)
Frame = +2
Query: 125 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQFVLMCGTQPDKRSLVV 304
LVG G+GK+ +++T F +Y +TL E + T GQ LM +
Sbjct: 14 LVGMAGSGKSAIAVKYITKRFIGEYDSTL--EDNYCRQETVGGQ-SLMVWMMDTVENATK 70
Query: 305 LETDTIFKDNVLSVMFDVTSRVTYK 379
E I +V V++DVTS+++++
Sbjct: 71 DEMRWIAWADVYVVVYDVTSQLSFQ 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,538,667
Number of Sequences: 27780
Number of extensions: 441029
Number of successful extensions: 1606
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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