Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20001
         (745 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    53   3e-09
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    53   3e-09
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    48   6e-08
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    27   0.16 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.4  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   6.0  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 52.8 bits (121), Expect = 3e-09
 Identities = 25/28 (89%), Positives = 25/28 (89%)
 Frame = +3

Query: 585 INEPTAAAIAYGLDKKGTGERNVLIFDL 668
           INEPTAAAIAYGLDKK   ERNVLIFDL
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDL 28



 Score = 50.8 bits (116), Expect = 1e-08
 Identities = 22/25 (88%), Positives = 25/25 (100%)
 Frame = +2

Query: 671 GGTFDVSILTIEDGIFEVKSTAGDT 745
           GGTFDVS+LTIE+GIFEVK+TAGDT
Sbjct: 30  GGTFDVSLLTIEEGIFEVKATAGDT 54


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 52.8 bits (121), Expect = 3e-09
 Identities = 25/28 (89%), Positives = 25/28 (89%)
 Frame = +3

Query: 585 INEPTAAAIAYGLDKKGTGERNVLIFDL 668
           INEPTAAAIAYGLDKK   ERNVLIFDL
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDL 28



 Score = 50.8 bits (116), Expect = 1e-08
 Identities = 22/25 (88%), Positives = 25/25 (100%)
 Frame = +2

Query: 671 GGTFDVSILTIEDGIFEVKSTAGDT 745
           GGTFDVS+LTIE+GIFEVK+TAGDT
Sbjct: 30  GGTFDVSLLTIEEGIFEVKATAGDT 54


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 48.4 bits (110), Expect = 6e-08
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = +3

Query: 585 INEPTAAAIAYGLDKKGTGERNVLIFDL 668
           INEPTAAAIAYGLDKKG  E+N+L++DL
Sbjct: 1   INEPTAAAIAYGLDKKG-AEQNILVYDL 27



 Score = 45.6 bits (103), Expect = 4e-07
 Identities = 19/25 (76%), Positives = 24/25 (96%)
 Frame = +2

Query: 671 GGTFDVSILTIEDGIFEVKSTAGDT 745
           GGTFDVSILTI++G+FEV +T+GDT
Sbjct: 29  GGTFDVSILTIDNGVFEVVATSGDT 53


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +2

Query: 179 DHSVLCCVHRHRASHRRCRQEPGGDDPNNTIFDAKRLI--GRKFEDATVQADMKHWPFEV 352
           DH  +  +H +  SH   +QEP G   +N  F   RL+       D  + ADM  + +  
Sbjct: 342 DHQAM--LHHNPMSHH-LKQEPSGFTSSNHPFSINRLLPTAESKADIKMYADMHQYGYNT 398

Query: 353 VS 358
           +S
Sbjct: 399 LS 400


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 131 LPAREGGDHRQRPGQQDH 184
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 540 TKDAGTISGLNVLRIINEPTAA 605
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 480 NCAECSYHGSAYFNDSQ 530
           N   C Y+  AYF D Q
Sbjct: 19  NKVVCYYNSKAYFRDGQ 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,110
Number of Sequences: 336
Number of extensions: 4374
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)