Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS01000
(676 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0961 + 9566730-9566998,9567096-9567187,9567294-9567427,956... 40 0.002
07_03_1651 - 28395369-28395436,28395524-28395575,28395857-283960... 40 0.002
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 39 0.004
07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349... 38 0.010
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 38 0.010
01_06_0829 - 32270189-32270863 37 0.013
08_01_0413 - 3679887-3681254 37 0.017
02_03_0412 - 18749430-18749587,18749696-18749857,18750062-187501... 37 0.017
05_05_0173 + 22956927-22958615 36 0.022
01_06_1819 + 40110697-40110721,40110818-40110828,40111228-401115... 36 0.022
03_05_0677 + 26663880-26664581 36 0.039
01_06_1224 - 35508842-35510404 36 0.039
02_04_0653 - 24747959-24748276,24748847-24748959,24749815-247500... 35 0.052
03_05_0513 - 25073518-25073623,25073719-25073777,25074048-250741... 35 0.068
02_05_0084 - 25690346-25691206 35 0.068
12_02_1243 + 27300978-27301682 34 0.12
05_03_0471 - 14455543-14455650,14455925-14456002,14456121-144562... 33 0.16
05_01_0018 + 125697-126130,126231-126356,126726-126825,126950-12... 33 0.16
01_01_0475 + 3500385-3500880,3501078-3501154,3501851-3502019,350... 33 0.16
09_04_0706 + 19627024-19627380,19629945-19629976,19630657-196307... 33 0.21
04_03_0205 + 12649724-12650191,12651493-12652025,12652114-126522... 32 0.36
01_06_1809 - 40029628-40030539 32 0.36
08_02_1334 - 26224546-26225337 32 0.48
07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672 32 0.48
04_03_0830 - 20125827-20125913,20126262-20126357,20126974-201270... 29 0.65
02_05_0890 - 32546918-32547088,32547224-32547334,32547705-325478... 31 0.84
01_06_1720 + 39421381-39421444,39422424-39422601,39422812-394229... 31 0.84
09_04_0651 - 19224403-19225032 31 1.1
07_01_1116 + 10308029-10308111,10308575-10308737,10308996-103090... 31 1.1
06_03_0474 + 21208643-21209266 29 4.5
06_01_0838 - 6360232-6360460,6360571-6360719,6360825-6360933,636... 29 4.5
01_06_0919 - 32993752-32993856,32994383-32994592,32994666-329952... 29 4.5
06_02_0066 - 11081446-11081544,11081639-11081846,11083122-110832... 28 5.9
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 28 5.9
11_04_0312 - 16259612-16260231,16260264-16262796 28 7.8
09_04_0144 + 15071723-15071993,15072078-15072632,15072671-150726... 28 7.8
01_05_0317 + 20822881-20822994,20824036-20824176,20824249-20825022 28 7.8
>12_01_0961 +
9566730-9566998,9567096-9567187,9567294-9567427,
9567542-9567591,9569026-9569100,9569179-9569734
Length = 391
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 171 EYDCAVCLQKCQHPTKLSCGHVFCFLCVR 257
E CA+CL+ C P+ CGH FC C++
Sbjct: 161 ELSCAICLEICFEPSTTPCGHSFCMKCLK 189
>07_03_1651 -
28395369-28395436,28395524-28395575,28395857-28396092,
28396362-28396419,28396509-28396577,28396686-28396791,
28397104-28397171,28397266-28397385,28398144-28398231,
28399433-28399534,28399699-28399757,28399866-28400003,
28400222-28400473,28400508-28400593,28401061-28401165,
28402351-28402516
Length = 590
Score = 39.5 bits (88), Expect = 0.002
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 180 CAVCLQKCQHPTKLSCGHVFCFLC 251
C++CL P LSCGH++C+LC
Sbjct: 199 CSICLDTVFDPVALSCGHIYCYLC 222
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 38.7 bits (86), Expect = 0.004
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 174 YDCAVCLQKCQHPTKLSCGHVFCFLCVR 257
+ C VCL K P+ +CGH+FC C++
Sbjct: 317 FTCPVCLNKLDKPSTTNCGHIFCEKCIQ 344
>07_03_1304 - 25629822-25629839,25630091-25631148,25631784-25634928,
25635454-25636293
Length = 1686
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 168 MEYDCAVCLQKCQHPTKL-SCGHVFCFLCV 254
+E C +CL + + P KL SCGHVFC C+
Sbjct: 1520 LENACPICLCEVEDPFKLESCGHVFCLTCL 1549
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +3
Query: 138 KHAVLIFSHNMEYDCAVCLQKCQHPTK----LSCGHVFCFLCVRV*LIKAENV 284
K V+ +E D A+C +C P + +CGHVFC+ CV L ENV
Sbjct: 757 KETVINLLGQLEGDYAIC-SRCSDPPEDVVVATCGHVFCYQCVHKSLTSDENV 808
>01_06_0829 - 32270189-32270863
Length = 224
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 174 YDCAVCLQKCQHPTKLSCGHVFCFLCVRV*L-IKAENVQCAAQK 302
++C +CL+ Q P CGH+FC+ C+ L + A + +C K
Sbjct: 25 FECNICLELAQDPVVTLCGHLFCWPCLYEWLHVHAHSRECPVCK 68
>08_01_0413 - 3679887-3681254
Length = 455
Score = 36.7 bits (81), Expect = 0.017
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 165 NMEYDCAVCLQKCQHPTKLSCGHVFCFLCV 254
N ++C +C + + P CGH+FC+ C+
Sbjct: 236 NGSFECNICFESAKDPVVTPCGHLFCWPCI 265
>02_03_0412 -
18749430-18749587,18749696-18749857,18750062-18750194,
18751640-18751744,18751818-18751935,18752232-18752320,
18752407-18753660,18753785-18753831,18754285-18754339,
18754783-18754884
Length = 740
Score = 36.7 bits (81), Expect = 0.017
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 171 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 254
E C +CL+ P SCGH++CF C+
Sbjct: 229 EVQCPICLESPLCPQITSCGHIYCFPCI 256
>05_05_0173 + 22956927-22958615
Length = 562
Score = 36.3 bits (80), Expect = 0.022
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 174 YDCAVCLQKCQHPTKLSCGHVFCFLCV 254
++C +C + P SCGH+FC+ C+
Sbjct: 236 FECNICFEMASEPVVTSCGHLFCWPCL 262
>01_06_1819 +
40110697-40110721,40110818-40110828,40111228-40111572,
40111707-40111782,40113605-40113771,40113818-40114036
Length = 280
Score = 36.3 bits (80), Expect = 0.022
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 174 YDCAVCLQKCQHPTKLSCGHVFCFLCVR 257
++C VC+ + P+ CGH+FC C++
Sbjct: 223 FNCPVCMNELVEPSSTICGHIFCKQCIK 250
>03_05_0677 + 26663880-26664581
Length = 233
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 174 YDCAVCLQKCQHPTKLSCGHVFCFLCV-RV*LIKAENVQCAAQK 302
++C +C + Q P CGH+FC+ C+ R I A + +C K
Sbjct: 22 FECNICFELPQEPIVTLCGHLFCWPCIYRWLHIHAHSPECPVCK 65
>01_06_1224 - 35508842-35510404
Length = 520
Score = 35.5 bits (78), Expect = 0.039
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 174 YDCAVCLQKCQHPTKLSCGHVFCFLCV 254
++C +C P SCGH+FC+ C+
Sbjct: 192 FECNICFDMASEPVVTSCGHLFCWPCL 218
>02_04_0653 -
24747959-24748276,24748847-24748959,24749815-24750015,
24750097-24750267,24750354-24750425,24751515-24751543,
24752161-24752303
Length = 348
Score = 35.1 bits (77), Expect = 0.052
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 171 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 254
+ CA+C + P L+CGHV+C C+
Sbjct: 118 DVSCALCKELLYQPAVLNCGHVYCMSCL 145
>03_05_0513 -
25073518-25073623,25073719-25073777,25074048-25074185,
25074719-25074982,25075062-25075306,25075874-25076081
Length = 339
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +3
Query: 150 LIFSHNMEYD----CAVCLQKCQHPTKLSCGHVFCFLC 251
+ S M+Y+ C +CL +P LSCGH+FC C
Sbjct: 221 MAISETMKYEYSLTCPICLDTLFNPYALSCGHLFCKGC 258
>02_05_0084 - 25690346-25691206
Length = 286
Score = 34.7 bits (76), Expect = 0.068
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 174 YDCAVCLQKCQHPTKLSCGHVFCFLCV 254
+DC +CL P CGH++C+ C+
Sbjct: 49 FDCNICLDFATEPVVTLCGHLYCWPCI 75
>12_02_1243 + 27300978-27301682
Length = 234
Score = 33.9 bits (74), Expect = 0.12
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 174 YDCAVCLQKCQHPTKLSCGHVFCFLCV 254
++C +C + Q P CGH+FC+ C+
Sbjct: 23 FECNICFELPQEPIVTLCGHLFCWPCL 49
>05_03_0471 -
14455543-14455650,14455925-14456002,14456121-14456285,
14457151-14457261,14457863-14458024,14458462-14458538,
14459526-14460177
Length = 450
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 180 CAVCLQKCQHPTKLSCGHVFCFLCV 254
CA+C +K P L C H+FC CV
Sbjct: 423 CAICQEKMHVPVLLRCKHIFCEDCV 447
>05_01_0018 +
125697-126130,126231-126356,126726-126825,126950-126969,
127118-127220,127331-127469,127577-127791,127873-128523
Length = 595
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 171 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 254
E+ C++C Q + P C H FC LC+
Sbjct: 308 EFGCSICKQVMKEPLTTPCAHNFCKLCL 335
>01_01_0475 +
3500385-3500880,3501078-3501154,3501851-3502019,
3502385-3502473,3502601-3502765,3502841-3502918,
3503087-3503190,3503317-3503422
Length = 427
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 180 CAVCLQKCQHPTKLSCGHVFCFLCV 254
CA+C +K P L C H+FC CV
Sbjct: 366 CAICQEKMHTPILLRCKHIFCEDCV 390
>09_04_0706 +
19627024-19627380,19629945-19629976,19630657-19630751,
19632116-19632281,19632881-19632938,19633014-19633061,
19633274-19633464,19633580-19633702,19635174-19635289,
19635841-19635924,19636009-19636259,19636438-19636647
Length = 576
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 180 CAVCLQKCQHPTKLSCGHVFCFLCVRV*LIKAENVQC 290
C +C + P+ L+CGHV+C C+ + E ++C
Sbjct: 406 CLICQELLFDPSVLNCGHVYCMPCLT--SVGGEELEC 440
>04_03_0205 +
12649724-12650191,12651493-12652025,12652114-12652239,
12652625-12652724,12652880-12652899,12653035-12653137,
12653213-12653351,12653448-12653662,12653772-12654320
Length = 750
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 165 NMEYDCAVCLQKCQHPTKLSCGHVFCFLCVR 257
N +C+ C+ + P CGH FC C R
Sbjct: 139 NKNINCSFCMLLPERPVTTPCGHNFCLKCFR 169
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 171 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 254
E+ C++C + P C H FC C+
Sbjct: 497 EFRCSICRNVMEEPVTTPCAHNFCKKCL 524
>01_06_1809 - 40029628-40030539
Length = 303
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 168 MEYDCAVCLQKCQHPTKLSCGHVFCFLCVR 257
M + C VC+ + + + CGH FC LC R
Sbjct: 251 MVHVCCVCMVRHKGAAFIPCGHTFCRLCSR 280
>08_02_1334 - 26224546-26225337
Length = 263
Score = 31.9 bits (69), Expect = 0.48
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 180 CAVCLQKCQHPTKLSCGHVFCFLCVR 257
C VC+ + + + CGH FC C R
Sbjct: 215 CCVCMARAKGAAFIPCGHTFCRTCAR 240
>07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672
Length = 641
Score = 31.9 bits (69), Expect = 0.48
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +3
Query: 132 VLKHAVLIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCVRV*LIKAENVQC 290
+LK + +++C +CL SC H++C C+ + ++K+ + +C
Sbjct: 379 LLKKLASLVDDGDDFECPICLAPPAKTVITSCTHIYCQTCI-MKILKSSSSRC 430
>04_03_0830 -
20125827-20125913,20126262-20126357,20126974-20127053,
20127124-20127220,20127457-20127544,20128491-20128576,
20129358-20130530
Length = 568
Score = 29.1 bits (62), Expect(2) = 0.65
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 578 PLHPPPASMITSTELSH-CLEVNNDKVP 498
P HPPPAS +ST SH E ++ +P
Sbjct: 71 PFHPPPASASSSTPTSHVAAESSSSSLP 98
Score = 21.0 bits (42), Expect(2) = 0.65
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 500 PASSKVHSDSPLLKAFSNSELYAHHISTN 414
PA S V +DSP K+F S LY+ S++
Sbjct: 138 PAPSAVTADSPRKKSFW-SFLYSSSSSSS 165
>02_05_0890 -
32546918-32547088,32547224-32547334,32547705-32547884,
32547960-32548064,32548333-32548431,32548524-32548679,
32548772-32548850,32549213-32549278,32549382-32549536,
32549675-32550034,32550150-32550305,32550779-32550856,
32551471-32551812
Length = 685
Score = 31.1 bits (67), Expect = 0.84
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +3
Query: 180 CAVCLQKCQHPTKLSCGHVFCFLCVRV*LIKAENVQC 290
C +C+ + +CGH FC++C+ L + C
Sbjct: 60 CPICMAVIKDAFLTACGHSFCYMCIVTHLSHKSDCPC 96
>01_06_1720 +
39421381-39421444,39422424-39422601,39422812-39422980,
39423101-39423170,39423259-39423487,39425130-39425340
Length = 306
Score = 31.1 bits (67), Expect = 0.84
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 171 EYDCAVCLQKCQHPTKLSCGHVFCFLCVR 257
E +C +CL+ C +C H C C R
Sbjct: 207 EDECGICLETCTKMVLPNCNHAMCINCYR 235
>09_04_0651 - 19224403-19225032
Length = 209
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 180 CAVCLQKCQHPTKLSCGHVFCFLCVR 257
C VC+ + + + CGH FC C R
Sbjct: 161 CCVCMARGKAAAFIPCGHTFCRACAR 186
>07_01_1116 +
10308029-10308111,10308575-10308737,10308996-10309062,
10309120-10309375,10309658-10309781,10310039-10310077
Length = 243
Score = 30.7 bits (66), Expect = 1.1
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +3
Query: 171 EYDCAVCLQKCQHPTKLSCGHVFCFLCVR 257
E +C +C++ C +C H C C R
Sbjct: 160 EDECGICMETCTKMVLPNCSHAMCIKCYR 188
>06_03_0474 + 21208643-21209266
Length = 207
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -3
Query: 566 PPASMITSTELSHCLEVNNDKVPASSKVHSDSPLLKAFSNSELYAHHIST 417
PP++ +T + C + +V A V + P++++F N + Y H + T
Sbjct: 32 PPSTTTATTAAATCTSLVTQRVAAP--VRAVWPIVRSFGNPQRYKHFVRT 79
>06_01_0838 -
6360232-6360460,6360571-6360719,6360825-6360933,
6361446-6362276,6362865-6362969,6363084-6363180,
6363303-6363341,6363435-6363477
Length = 533
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -3
Query: 578 PLHPPPASMITSTELSHCLEV-NNDKV--PASSKVHSDSPLLKAFSNS 444
PL PPP+S T++E S+ D V AS + +P LK SNS
Sbjct: 141 PLTPPPSSSTTTSESSNGARTRRRDAVSRSASGNLFFHTPSLKMLSNS 188
>01_06_0919 - 32993752-32993856,32994383-32994592,32994666-32995220,
32995705-32995926,32996381-32996511,32997456-32998353,
32998453-32998530,32998612-32998683,32998728-32998763,
32999413-33000353,33000531-33000659,33000751-33000894,
33000994-33001060,33002434-33002502,33003144-33003278
Length = 1263
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3
Query: 138 KHAVLIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLCV 254
+ ++L+ + CA+C + CGHVFC C+
Sbjct: 956 QQSLLVCLQSCSAICALCNDAPEDAVVTICGHVFCNQCI 994
>06_02_0066 -
11081446-11081544,11081639-11081846,11083122-11083257,
11083339-11083541,11083616-11083765,11083848-11083964,
11084623-11085119
Length = 469
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 180 CAVCLQKCQHPTKLSCGHVFCFLCVR 257
C +C ++ KL CGH+F C+R
Sbjct: 260 CIICREEMTTAKKLLCGHLFHVHCLR 285
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 180 CAVCLQKCQHPTKLSCGHVFCFLCV 254
C +CL+ HP GH FC C+
Sbjct: 1185 CCLCLKPLIHPLCCPKGHTFCKECI 1209
>11_04_0312 - 16259612-16260231,16260264-16262796
Length = 1050
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -1
Query: 199 FCKQTAQSYSILCEKINTACLSTHKLSHTYLPISKLLKYVC 77
FC+Q A Y I +KIN + ++S I KL VC
Sbjct: 511 FCEQFAAPYEIAEDKINEKFKTCKRVSFINTSIEKLTAPVC 551
>09_04_0144 +
15071723-15071993,15072078-15072632,15072671-15072681,
15072954-15073012,15073962-15074040
Length = 324
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +3
Query: 174 YDCAVCLQKCQHPTKLS---CGHVFCFLCV 254
+ C+VC++K Q + + C H FC C+
Sbjct: 108 FKCSVCMEKLQVSEQFTVSFCAHAFCNSCI 137
>01_05_0317 + 20822881-20822994,20824036-20824176,20824249-20825022
Length = 342
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 554 YSQAAGAKGYPTVTCQRNSRYKNQY*SKCQLK 649
Y + G G+ TC R S Y++ Y S C K
Sbjct: 304 YCKQCGGHGHYNSTCGRKSSYESHYNSTCGRK 335
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,621,578
Number of Sequences: 37544
Number of extensions: 361208
Number of successful extensions: 938
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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