Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS01000
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    26   0.95 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    26   0.95 
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.8  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +3

Query: 138 KHAVLIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLC 251
           K+ +      + + C VC +    P    C H FC  C
Sbjct: 233 KYEIHSDDEELPFKCYVCRESFVDPIVTKCKHYFCERC 270


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 10/38 (26%), Positives = 15/38 (39%)
 Frame = +3

Query: 138 KHAVLIFSHNMEYDCAVCLQKCQHPTKLSCGHVFCFLC 251
           K+ +      + + C VC +    P    C H FC  C
Sbjct: 233 KYEIHSDDEELPFKCYVCRESFVDPIVTKCKHYFCERC 270


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = -3

Query: 566  PPASMITSTELSHCLEVNNDKVPASS 489
            PP++   ++  S+C  VN +K+ A++
Sbjct: 1229 PPSTFAQNSNASNCSSVNYNKLKANN 1254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,983
Number of Sequences: 2352
Number of extensions: 15522
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)