Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00999
(679 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05425-1|AAC37588.1| 731|Homo sapiens nucleolar GTPase protein. 101 2e-21
BC009250-1|AAH09250.1| 731|Homo sapiens guanine nucleotide bind... 101 2e-21
BC000107-1|AAH00107.1| 731|Homo sapiens guanine nucleotide bind... 101 2e-21
AL513220-1|CAI15784.1| 731|Homo sapiens guanine nucleotide bind... 101 2e-21
AL034379-1|CAI20546.1| 731|Homo sapiens guanine nucleotide bind... 101 2e-21
>L05425-1|AAC37588.1| 731|Homo sapiens nucleolar GTPase protein.
Length = 731
Score = 101 bits (242), Expect = 2e-21
Identities = 44/88 (50%), Positives = 67/88 (76%), Gaps = 2/88 (2%)
Frame = +1
Query: 250 KKDKTGKILTPAPFQGWLPSGTQARVEPNQKWFGNSRVISQNALQKFQEEFGAAVRNPYQ 429
+++ GKI+ P +Q + SGT ARVEPN KWFGN+RVI Q++LQKFQEE +++PY+
Sbjct: 49 RRNSRGKIIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVMKDPYK 108
Query: 430 VIMKPTNLPITLLNEKAK--NARVHLLD 507
V+MK + LP++LL+++ + N +VH+LD
Sbjct: 109 VVMKQSKLPMSLLHDRIRPHNLKVHILD 136
Score = 36.7 bits (81), Expect = 0.076
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 510 EGFDRTFGPKKQRKRVNLNSAI*MICIKR*KKALRNMMKLNDIDRVRADSGVK 668
E F+ TFGPK QRKR NL ++ I+ + + + + D D V D+GV+
Sbjct: 138 ESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDTGVR 190
>BC009250-1|AAH09250.1| 731|Homo sapiens guanine nucleotide binding
protein-like 2 (nucleolar) protein.
Length = 731
Score = 101 bits (242), Expect = 2e-21
Identities = 44/88 (50%), Positives = 67/88 (76%), Gaps = 2/88 (2%)
Frame = +1
Query: 250 KKDKTGKILTPAPFQGWLPSGTQARVEPNQKWFGNSRVISQNALQKFQEEFGAAVRNPYQ 429
+++ GKI+ P +Q + SGT ARVEPN KWFGN+RVI Q++LQKFQEE +++PY+
Sbjct: 49 RRNSRGKIIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVMKDPYK 108
Query: 430 VIMKPTNLPITLLNEKAK--NARVHLLD 507
V+MK + LP++LL+++ + N +VH+LD
Sbjct: 109 VVMKQSKLPMSLLHDRIRPHNLKVHILD 136
Score = 36.7 bits (81), Expect = 0.076
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 510 EGFDRTFGPKKQRKRVNLNSAI*MICIKR*KKALRNMMKLNDIDRVRADSGVK 668
E F+ TFGPK QRKR NL ++ I+ + + + + D D V D+GV+
Sbjct: 138 ESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDTGVR 190
>BC000107-1|AAH00107.1| 731|Homo sapiens guanine nucleotide binding
protein-like 2 (nucleolar) protein.
Length = 731
Score = 101 bits (242), Expect = 2e-21
Identities = 44/88 (50%), Positives = 67/88 (76%), Gaps = 2/88 (2%)
Frame = +1
Query: 250 KKDKTGKILTPAPFQGWLPSGTQARVEPNQKWFGNSRVISQNALQKFQEEFGAAVRNPYQ 429
+++ GKI+ P +Q + SGT ARVEPN KWFGN+RVI Q++LQKFQEE +++PY+
Sbjct: 49 RRNSRGKIIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVMKDPYK 108
Query: 430 VIMKPTNLPITLLNEKAK--NARVHLLD 507
V+MK + LP++LL+++ + N +VH+LD
Sbjct: 109 VVMKQSKLPMSLLHDRIRPHNLKVHILD 136
Score = 36.7 bits (81), Expect = 0.076
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 510 EGFDRTFGPKKQRKRVNLNSAI*MICIKR*KKALRNMMKLNDIDRVRADSGVK 668
E F+ TFGPK QRKR NL ++ I+ + + + + D D V D+GV+
Sbjct: 138 ESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDTGVR 190
>AL513220-1|CAI15784.1| 731|Homo sapiens guanine nucleotide binding
protein-like 2 (nucleolar) protein.
Length = 731
Score = 101 bits (242), Expect = 2e-21
Identities = 44/88 (50%), Positives = 67/88 (76%), Gaps = 2/88 (2%)
Frame = +1
Query: 250 KKDKTGKILTPAPFQGWLPSGTQARVEPNQKWFGNSRVISQNALQKFQEEFGAAVRNPYQ 429
+++ GKI+ P +Q + SGT ARVEPN KWFGN+RVI Q++LQKFQEE +++PY+
Sbjct: 49 RRNSRGKIIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVMKDPYK 108
Query: 430 VIMKPTNLPITLLNEKAK--NARVHLLD 507
V+MK + LP++LL+++ + N +VH+LD
Sbjct: 109 VVMKQSKLPMSLLHDRIRPHNLKVHILD 136
Score = 36.7 bits (81), Expect = 0.076
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 510 EGFDRTFGPKKQRKRVNLNSAI*MICIKR*KKALRNMMKLNDIDRVRADSGVK 668
E F+ TFGPK QRKR NL ++ I+ + + + + D D V D+GV+
Sbjct: 138 ESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDTGVR 190
>AL034379-1|CAI20546.1| 731|Homo sapiens guanine nucleotide binding
protein-like 2 (nucleolar) protein.
Length = 731
Score = 101 bits (242), Expect = 2e-21
Identities = 44/88 (50%), Positives = 67/88 (76%), Gaps = 2/88 (2%)
Frame = +1
Query: 250 KKDKTGKILTPAPFQGWLPSGTQARVEPNQKWFGNSRVISQNALQKFQEEFGAAVRNPYQ 429
+++ GKI+ P +Q + SGT ARVEPN KWFGN+RVI Q++LQKFQEE +++PY+
Sbjct: 49 RRNSRGKIIKPLQYQSTVASGTVARVEPNIKWFGNTRVIKQSSLQKFQEEMDTVMKDPYK 108
Query: 430 VIMKPTNLPITLLNEKAK--NARVHLLD 507
V+MK + LP++LL+++ + N +VH+LD
Sbjct: 109 VVMKQSKLPMSLLHDRIRPHNLKVHILD 136
Score = 36.7 bits (81), Expect = 0.076
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +3
Query: 510 EGFDRTFGPKKQRKRVNLNSAI*MICIKR*KKALRNMMKLNDIDRVRADSGVK 668
E F+ TFGPK QRKR NL ++ I+ + + + + D D V D+GV+
Sbjct: 138 ESFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDTGVR 190
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,009,416
Number of Sequences: 237096
Number of extensions: 2213018
Number of successful extensions: 8017
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8017
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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