Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00999
         (679 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021571-4|CAI79270.1|  610|Caenorhabditis elegans Hypothetical ...   114   5e-26
AL021571-2|CAA16514.2|  592|Caenorhabditis elegans Hypothetical ...   114   5e-26
AL021571-1|CAA16512.2|  651|Caenorhabditis elegans Hypothetical ...   114   5e-26
Z46241-3|CAA86317.1|  556|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U64848-5|AAB04884.1|  330|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AC091124-1|AAK27878.1|  255|Caenorhabditis elegans Hypothetical ...    28   7.0  
U58750-14|AAB00655.4|  340|Caenorhabditis elegans Hypothetical p...    27   9.3  
U55373-9|AAV58870.1|  648|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U55373-8|AAD34666.1|  805|Caenorhabditis elegans Hypothetical pr...    27   9.3  
U55373-7|AAC25890.2|  890|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>AL021571-4|CAI79270.1|  610|Caenorhabditis elegans Hypothetical
           protein T19A6.2c protein.
          Length = 610

 Score =  114 bits (275), Expect = 5e-26
 Identities = 51/85 (60%), Positives = 63/85 (74%)
 Frame = +1

Query: 253 KDKTGKILTPAPFQGWLPSGTQARVEPNQKWFGNSRVISQNALQKFQEEFGAAVRNPYQV 432
           +D  GKIL  APFQ  L SGTQAR+EPN+KWFGN+R+I Q  LQKFQ   G  + +P+QV
Sbjct: 68  RDSKGKILKAAPFQDTLASGTQARIEPNRKWFGNTRIIGQEQLQKFQANLGKVLSDPFQV 127

Query: 433 IMKPTNLPITLLNEKAKNARVHLLD 507
           +MK T LPI+LL EKAK  RVH+ +
Sbjct: 128 VMKQTKLPISLLQEKAKTQRVHVTE 152



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 24/55 (43%), Positives = 31/55 (56%)
 Frame = +2

Query: 131 FNKSGHSMNPDRPTEGLKGVGNPRSKGTIKRLQMYRNFKAKRIKPEKF*RQHPFK 295
           F  S HSMNPDR  +      + RSK TI RL+MY++FK  R    K  +  PF+
Sbjct: 29  FRGSNHSMNPDRKPDAKDK--SQRSKATINRLRMYKSFKPIRDSKGKILKAAPFQ 81


>AL021571-2|CAA16514.2|  592|Caenorhabditis elegans Hypothetical
           protein T19A6.2b protein.
          Length = 592

 Score =  114 bits (275), Expect = 5e-26
 Identities = 51/85 (60%), Positives = 63/85 (74%)
 Frame = +1

Query: 253 KDKTGKILTPAPFQGWLPSGTQARVEPNQKWFGNSRVISQNALQKFQEEFGAAVRNPYQV 432
           +D  GKIL  APFQ  L SGTQAR+EPN+KWFGN+R+I Q  LQKFQ   G  + +P+QV
Sbjct: 9   RDSKGKILKAAPFQDTLASGTQARIEPNRKWFGNTRIIGQEQLQKFQANLGKVLSDPFQV 68

Query: 433 IMKPTNLPITLLNEKAKNARVHLLD 507
           +MK T LPI+LL EKAK  RVH+ +
Sbjct: 69  VMKQTKLPISLLQEKAKTQRVHVTE 93


>AL021571-1|CAA16512.2|  651|Caenorhabditis elegans Hypothetical
           protein T19A6.2a protein.
          Length = 651

 Score =  114 bits (275), Expect = 5e-26
 Identities = 51/85 (60%), Positives = 63/85 (74%)
 Frame = +1

Query: 253 KDKTGKILTPAPFQGWLPSGTQARVEPNQKWFGNSRVISQNALQKFQEEFGAAVRNPYQV 432
           +D  GKIL  APFQ  L SGTQAR+EPN+KWFGN+R+I Q  LQKFQ   G  + +P+QV
Sbjct: 68  RDSKGKILKAAPFQDTLASGTQARIEPNRKWFGNTRIIGQEQLQKFQANLGKVLSDPFQV 127

Query: 433 IMKPTNLPITLLNEKAKNARVHLLD 507
           +MK T LPI+LL EKAK  RVH+ +
Sbjct: 128 VMKQTKLPISLLQEKAKTQRVHVTE 152



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 24/55 (43%), Positives = 31/55 (56%)
 Frame = +2

Query: 131 FNKSGHSMNPDRPTEGLKGVGNPRSKGTIKRLQMYRNFKAKRIKPEKF*RQHPFK 295
           F  S HSMNPDR  +      + RSK TI RL+MY++FK  R    K  +  PF+
Sbjct: 29  FRGSNHSMNPDRKPDAKDK--SQRSKATINRLRMYKSFKPIRDSKGKILKAAPFQ 81


>Z46241-3|CAA86317.1|  556|Caenorhabditis elegans Hypothetical
           protein C38D4.4 protein.
          Length = 556

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +1

Query: 259 KTGKILTPAPFQGWLPSGTQARVEPNQKWFGN 354
           K+  +     F+ WL  GT  RVE  + WF N
Sbjct: 281 KSWMMFVKTSFKEWLQLGTDGRVEVKEPWFTN 312


>U64848-5|AAB04884.1|  330|Caenorhabditis elegans Hypothetical
           protein C50E3.9 protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 17/64 (26%), Positives = 34/64 (53%)
 Frame = -1

Query: 316 VCLMVTNLERVLALEFFRFYPFCLKVSVHL*SLNCSF*SRVAYAFQTLCGSIRVH*MPRL 137
           +C++   L   LA++ ++     +K S+ + SL+CS   R+ ++   +C S+     P L
Sbjct: 111 ICILNFTLWIYLAIDQWKRIEKDVKTSISMLSLSCSIGVRILFSTVAICISLVYGSKPSL 170

Query: 136 IKPL 125
           IK +
Sbjct: 171 IKSI 174


>AC091124-1|AAK27878.1|  255|Caenorhabditis elegans Hypothetical
           protein Y47A7.2 protein.
          Length = 255

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 122 KQGFNKSGHSMNPDRPTEGLKGVGNPRSKGTI-KRLQMYRNFK 247
           K+G  K+G  +  DR  EG K  G+ +  G I K L+   N K
Sbjct: 194 KKGVKKTGKRVGEDREREGKKAKGDNKKTGGIGKSLERAANKK 236


>U58750-14|AAB00655.4|  340|Caenorhabditis elegans Hypothetical
           protein F55G1.15 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 96  TFPIFVCDLIHVYGKKKLLFHFYYTIN 16
           TF + +  ++ +    K LF+FYYTI+
Sbjct: 32  TFFLLIAPIVMIMSTLKWLFYFYYTID 58


>U55373-9|AAV58870.1|  648|Caenorhabditis elegans Hypothetical
           protein F26F12.3c protein.
          Length = 648

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +3

Query: 336 PKMVWKFKSYITECIAKISRG-VWSC--CKKSISSDHETNEF 452
           P + +  K   TE +A +  G +  C  CK+ +  DH TNEF
Sbjct: 363 PLLNFYTKIAATESLANVDGGDIGECPSCKQLVHIDHNTNEF 404


>U55373-8|AAD34666.1|  805|Caenorhabditis elegans Hypothetical
           protein F26F12.3b protein.
          Length = 805

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +3

Query: 336 PKMVWKFKSYITECIAKISRG-VWSC--CKKSISSDHETNEF 452
           P + +  K   TE +A +  G +  C  CK+ +  DH TNEF
Sbjct: 520 PLLNFYTKIAATESLANVDGGDIGECPSCKQLVHIDHNTNEF 561


>U55373-7|AAC25890.2|  890|Caenorhabditis elegans Hypothetical
           protein F26F12.3a protein.
          Length = 890

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +3

Query: 336 PKMVWKFKSYITECIAKISRG-VWSC--CKKSISSDHETNEF 452
           P + +  K   TE +A +  G +  C  CK+ +  DH TNEF
Sbjct: 605 PLLNFYTKIAATESLANVDGGDIGECPSCKQLVHIDHNTNEF 646


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,499,050
Number of Sequences: 27780
Number of extensions: 343716
Number of successful extensions: 894
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)