Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00999
         (679 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   4.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   4.7  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   4.7  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   6.2  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   8.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.2  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   8.2  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -2

Query: 222  LLIVPFDLGLPTPFKPSVGRSGFIECPDLL 133
            L   PF+   P PF PS   +G    P +L
Sbjct: 1156 LPFTPFNFWNPPPFMPSPFMAGAPNVPTIL 1185


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 48  FFFHKRVLNR 77
           FF HK+VLNR
Sbjct: 259 FFLHKQVLNR 268


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 48  FFFHKRVLNR 77
           FF HK+VLNR
Sbjct: 259 FFLHKQVLNR 268


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 323 ALNQTKNGLEIQELYHRMHCKNFKRSLEL 409
           +LN  +N    + +YHR H KN ++  E+
Sbjct: 44  SLNSLRNH---KSIYHRQHSKNEQQRKEM 69


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 202 IKRNN*ETTDVPKL*GKKDKTGKILTPAP 288
           I+RNN   + +  +  KK K G +L P P
Sbjct: 86  IERNNGVPSSLNVVTNKKGKGGPLLRPYP 114


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -2

Query: 642 CQYRLVSSYFSELSSTALCKSFRSLNLNSLFFSAF*DQMSYQN 514
           C Y L S  F     + +CK F     N+L   +   Q++ +N
Sbjct: 60  CIYALFSKDFRFAFKSIICKCFCKRRTNTLRRGSDGSQLAMRN 102


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -2

Query: 642 CQYRLVSSYFSELSSTALCKSFRSLNLNSLFFSAF*DQMSYQN 514
           C Y L S  F     + +CK F     N+L   +   Q++ +N
Sbjct: 508 CIYALFSKDFRFAFKSIICKCFCKRRTNTLRRGSDGSQLAMRN 550


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 585 KSFRSLNLNSLFFS 544
           KSF  LN N LFF+
Sbjct: 142 KSFSLLNFNLLFFN 155


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,125
Number of Sequences: 438
Number of extensions: 4325
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)