Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00997
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.81 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   3.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.5  
AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...    21   7.5  
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    21   7.5  
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...    21   7.5  
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...    21   7.5  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.81
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 538 YMSWNTRFTSITGWGHMQC 594
           + SW   +TS+T +G++ C
Sbjct: 57  FKSWKVLYTSLTSFGYLFC 75


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 533 EVICHGIPDLRPLQDGDICNVD 598
           E+ C+G PD +   D + C V+
Sbjct: 125 ELFCNGKPDCKDESDENSCTVE 146


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 533 EVICHGIPDLRPLQDGDICNVD 598
           E+ C+G PD +   D + C V+
Sbjct: 132 ELFCNGKPDCKDESDENSCTVE 153


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 384 VLDEAARVCDVGVSTDEIDRVVHEA 458
           VLDEA R+ D+G   D  + + H++
Sbjct: 314 VLDEADRMLDMGFLGDVEEMLSHQS 338


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 196 P*RYTTAMGYIPRLQHRYCHLSLM 125
           P +Y+T +  I  +  RYC + L+
Sbjct: 59  PRKYSTPLAKITTILQRYCSVLLV 82


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 414 VGVSTDEIDRV 446
           VG++TD IDRV
Sbjct: 73  VGITTDTIDRV 83


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 196 P*RYTTAMGYIPRLQHRYCHLSLM 125
           P +Y+T +  I  +  RYC + L+
Sbjct: 55  PRKYSTPLAKITTILQRYCSVLLV 78


>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 GRRITLIIRPGSRLQSMLLKVQLK 321
           G+ ITL + P   ++++  K+Q K
Sbjct: 10  GKTITLEVEPSDTIENVKAKIQDK 33


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 GRRITLIIRPGSRLQSMLLKVQLK 321
           G+ ITL + P   ++++  K+Q K
Sbjct: 10  GKTITLEVEPSDTIENVKAKIQDK 33



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 GRRITLIIRPGSRLQSMLLKVQLK 321
           G+ ITL + P   ++++  K+Q K
Sbjct: 86  GKTITLEVEPSDTIENVKAKIQDK 109



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 GRRITLIIRPGSRLQSMLLKVQLK 321
           G+ ITL + P   ++++  K+Q K
Sbjct: 162 GKTITLEVEPSDTIENVKAKIQDK 185



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 GRRITLIIRPGSRLQSMLLKVQLK 321
           G+ ITL + P   ++++  K+Q K
Sbjct: 238 GKTITLEVEPSDTIENVKAKIQDK 261



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 GRRITLIIRPGSRLQSMLLKVQLK 321
           G+ ITL + P   ++++  K+Q K
Sbjct: 314 GKTITLEVEPSDTIENVKAKIQDK 337



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 GRRITLIIRPGSRLQSMLLKVQLK 321
           G+ ITL + P   ++++  K+Q K
Sbjct: 390 GKTITLEVEPSDTIENVKAKIQDK 413



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 GRRITLIIRPGSRLQSMLLKVQLK 321
           G+ ITL + P   ++++  K+Q K
Sbjct: 466 GKTITLEVEPSDTIENVKAKIQDK 489



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 GRRITLIIRPGSRLQSMLLKVQLK 321
           G+ ITL + P   ++++  K+Q K
Sbjct: 542 GKTITLEVEPSDTIENVKAKIQDK 565



 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 GRRITLIIRPGSRLQSMLLKVQLK 321
           G+ ITL + P   ++++  K+Q K
Sbjct: 618 GKTITLEVEPSDTIENVKAKIQDK 641


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 GRRITLIIRPGSRLQSMLLKVQLK 321
           G+ ITL + P   ++++  K+Q K
Sbjct: 10  GKTITLEVEPSDTIENVKAKIQDK 33


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 250 GRRITLIIRPGSRLQSMLLKVQLK 321
           G+ ITL + P   ++++  K+Q K
Sbjct: 58  GKTITLEVEPSDTIENVKAKIQDK 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,126
Number of Sequences: 336
Number of extensions: 4149
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)