Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00997
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0835 - 32099966-32100111,32100418-32100465,32100673-321007... 94 1e-19
04_04_1111 - 30979334-30979479,30979769-30979866,30980364-309804... 91 8e-19
07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670... 87 1e-17
07_03_0551 + 19374405-19374541,19375201-19375435,19375539-193757... 76 3e-14
10_08_0584 + 18971761-18971834,18971852-18973133,18973197-189745... 66 2e-11
07_01_0339 - 2443123-2443508,2443590-2443651,2443692-2443704,244... 66 2e-11
03_01_0465 + 3598815-3598972,3599949-3600711,3601073-3601159,360... 38 0.010
10_07_0177 - 13841148-13841267,13841569-13841645,13842710-138428... 37 0.014
12_02_0241 + 16190408-16191103 31 0.91
07_03_1208 - 24896905-24896931,24897330-24897341,24898058-248983... 31 1.2
11_04_0167 + 14382976-14385244,14389373-14389842 30 1.6
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 30 2.1
07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026 29 3.7
11_06_0524 + 24576782-24577268,24577402-24578517,24578658-24578797 29 4.8
07_01_0137 + 1005818-1006852,1007645-1007827,1008398-1008616,100... 29 4.8
12_02_0370 + 18139557-18140469,18140561-18140704,18140804-181409... 28 6.4
11_04_0365 - 16818468-16818514,16818619-16821706,16822860-168229... 28 6.4
10_01_0315 - 3454846-3455465,3455562-3455663,3455828-3455954,345... 28 6.4
04_04_0115 + 22868554-22868749,22868863-22868912,22870009-228701... 28 6.4
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76... 28 8.5
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 28 8.5
>02_05_0835 -
32099966-32100111,32100418-32100465,32100673-32100770,
32101269-32101348,32101615-32101686,32102260-32102301,
32102382-32102543,32102971-32103199,32103681-32103747,
32103907-32104003
Length = 346
Score = 93.9 bits (223), Expect = 1e-19
Identities = 38/60 (63%), Positives = 46/60 (76%)
Frame = +2
Query: 503 FPNSCCTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKI 682
FP S CTS+NE ICHGIPD RPL+DGDI N+DVTVY G+HGD + TF GNV + +K+
Sbjct: 162 FPKSVCTSVNECICHGIPDSRPLEDGDIINIDVTVYLNGYHGDTSATFLCGNVDDKAKKL 221
Score = 60.5 bits (140), Expect = 1e-09
Identities = 41/130 (31%), Positives = 57/130 (43%)
Frame = +3
Query: 324 KILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHEACIERECYPSPLNYYN 503
+I D+ IE MR + +L +VL A + + G++TDEID+ VH+ ++ YPSPL Y
Sbjct: 102 EIHDERGIECMRASGKLAAQVLKFAGTLVEPGITTDEIDKAVHQMIVDNGAYPSPLGYCG 161
Query: 504 FPTVVVLQLMRLYVMEYQIYVHYRMGTYAMLM*QFTIEVSMVI*MKPFLLGMYQRLLVKL 683
FP V + G + + FL G KL
Sbjct: 162 FPKSVCTSVNECICHGIPDSRPLEDGDIINIDVTVYLNGYHGDTSATFLCGNVDDKAKKL 221
Query: 684 VQVTHECLQK 713
VQVT ECL K
Sbjct: 222 VQVTRECLDK 231
>04_04_1111 -
30979334-30979479,30979769-30979866,30980364-30980443,
30980685-30980756,30980860-30980901,30981009-30981170,
30981276-30981427,30981453-30981538,30981654-30981726,
30982706-30982889
Length = 364
Score = 91.1 bits (216), Expect = 8e-19
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +2
Query: 503 FPNSCCTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKI 682
FP S CTS+NE ICHGIPD R LQDGDI N+DVTVY G+HGD ++TF G V E ++++
Sbjct: 196 FPKSVCTSVNECICHGIPDSRELQDGDIINIDVTVYLNGYHGDTSKTFLCGEVDEASKRL 255
Score = 58.8 bits (136), Expect = 4e-09
Identities = 29/73 (39%), Positives = 43/73 (58%)
Frame = +3
Query: 300 AAKGSAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHEACIERECY 479
A++ +++I++ D I M+ AC L VL+ A + V+TDEID+ VH+ I+ Y
Sbjct: 128 ASEIASEIQMHDKVSIIHMKAACELAARVLEYAGTLVKPSVTTDEIDKAVHKMIIDAGAY 187
Query: 480 PSPLNYYNFPTVV 518
PSPL Y FP V
Sbjct: 188 PSPLGYGGFPKSV 200
>07_03_0151 -
14465479-14465675,14466280-14466401,14466934-14467081,
14467146-14467167,14467299-14467393,14467395-14467438,
14467750-14467841,14467911-14467982,14468188-14468229,
14468333-14468494,14468631-14468683,14468808-14468925,
14468974-14469150,14469573-14469639,14470195-14470273,
14473805-14473862,14474257-14474346,14474429-14474540,
14474649-14474912,14475361-14475463,14476200-14476278,
14476748-14476852
Length = 766
Score = 87.4 bits (207), Expect = 1e-17
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +2
Query: 503 FPNSCCTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKI 682
FP S CTS+NE ICHGIPD R LQ+GDI N+DVTVY G+HGD + T+ G V E+T ++
Sbjct: 466 FPKSVCTSVNECICHGIPDSRVLQNGDIINIDVTVYLNGYHGDTSRTYLCGEVDESTMQL 525
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/62 (41%), Positives = 33/62 (53%)
Frame = +3
Query: 333 DDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHEACIERECYPSPLNYYNFPT 512
D+ +E AC L VL+ A + +TDEIDR VH+ I+ YPSPL Y FP
Sbjct: 409 DEGALEARHAACELTARVLEYAGTLVKPLATTDEIDRAVHQMIIDAGAYPSPLGYGGFPK 468
Query: 513 VV 518
V
Sbjct: 469 SV 470
>07_03_0551 +
19374405-19374541,19375201-19375435,19375539-19375700,
19375778-19375819,19375941-19376012,19376291-19376370,
19376962-19377059,19377691-19377738,19377983-19378083,
19378331-19378426,19378599-19378689,19379510-19379706,
19380918-19381004,19381208-19381488,19381653-19381743
Length = 605
Score = 75.8 bits (178), Expect = 3e-14
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +2
Query: 503 FPNSCCTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTR 676
FP S CTS+NE +CHG+PD LQ GDI NVDV V+ G+HG + TF G V ++ R
Sbjct: 155 FPKSICTSLNECVCHGVPDSTQLQTGDIMNVDVNVFLNGYHGGASRTFVCGEVDDSIR 212
Score = 58.8 bits (136), Expect = 4e-09
Identities = 34/92 (36%), Positives = 46/92 (50%)
Frame = +3
Query: 255 PDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDE 434
P++ P+ + S + S+ +I E I GMR AC+L LD A + V+T+E
Sbjct: 73 PEHIPRPS-YVGSNRPQELSSVRQIHSAEGIAGMRAACKLAARALDFAGTLIKPSVTTNE 131
Query: 435 IDRVVHEACIERECYPSPLNYYNFPTVVVLQL 530
IDR VH IE YPS L Y FP + L
Sbjct: 132 IDREVHNMIIEAGAYPSQLGYGGFPKSICTSL 163
>10_08_0584 + 18971761-18971834,18971852-18973133,18973197-18974509,
18993885-18993935,18994674-18994829,18995048-18995123,
18995317-18995364,18995445-18995489,18995580-18995679,
18995923-18995968,18996115-18996176,18996257-18996355,
18996536-18996609,18996721-18996790,18997074-18997162,
18997327-18997404
Length = 1220
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = +2
Query: 563 RPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKI 682
R L+DGDI NVDVTVY++G HGDLNET+FVGNV E ++++
Sbjct: 1064 RKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEASKQL 1103
Score = 64.5 bits (150), Expect = 8e-11
Identities = 34/72 (47%), Positives = 45/72 (62%)
Frame = +3
Query: 255 PDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDE 434
PD+A G P E + +++I E+IE MR CR+ REVLD AAR+ G++TDE
Sbjct: 979 PDWA--LDGTPKIEPDSDLQKRVEIKTPEQIERMRETCRIAREVLDAAARIIKPGITTDE 1036
Query: 435 IDRVVHEACIER 470
IDRVVHE + R
Sbjct: 1037 IDRVVHEETVAR 1048
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Frame = +1
Query: 22 QLQCPTCIKLGI--KGSFFCNQDCFKKSWKTHKIIH----SLAKGDNTDA-------ANV 162
+ +CP C +L + +G+ FC QDCFK++W +HK +H +L +
Sbjct: 888 EAECPKCAQLKLLREGAAFCTQDCFKEAWSSHKSVHIKLDALTLQQTPEGWQYCLKKGRT 947
Query: 163 EYNPWPSYTFTGKLRPFPAGPKRTVPPHI 249
+ P + +TG LRP+P VP I
Sbjct: 948 RTSQLPRFDWTGPLRPYPISKMCVVPDKI 976
>07_01_0339 -
2443123-2443508,2443590-2443651,2443692-2443704,
2444483-2444495
Length = 157
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/40 (67%), Positives = 35/40 (87%)
Frame = +2
Query: 563 RPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKI 682
R L+DGDI NVDVTVY++G HGDLNET+FVGNV E ++++
Sbjct: 9 RKLEDGDIVNVDVTVYYKGVHGDLNETYFVGNVDEASKQL 48
>03_01_0465 +
3598815-3598972,3599949-3600711,3601073-3601159,
3601263-3601346,3601428-3601514,3601608-3601694,
3602239-3602292,3602380-3602471,3602564-3602678,
3602763-3602913,3603010-3603155
Length = 607
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 19 AQLQCPTCIK--LGIKGSFFCNQDCFKKSWKTHKIIHSLAKGDNTDAANVE 165
A +QC C+K + + S+ C+ CF +W+ H+++H A + N E
Sbjct: 73 ATIQCLGCLKSKIPVAKSYHCSAKCFSDAWQHHRVLHERALSALNENGNEE 123
>10_07_0177 -
13841148-13841267,13841569-13841645,13842710-13842860,
13842942-13843056,13843145-13843236,13843317-13843370,
13843849-13843935,13844023-13844109,13844191-13844274,
13844359-13844445,13844793-13845549,13846491-13846648
Length = 622
Score = 37.1 bits (82), Expect = 0.014
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 19 AQLQCPTCIK--LGIKGSFFCNQDCFKKSWKTHKIIHSLA 132
A +QC C+K + + S+ C+ CF +W+ H+++H A
Sbjct: 73 ATIQCLGCVKSKIPVAKSYHCSAKCFSDAWQHHRVLHERA 112
>12_02_0241 + 16190408-16191103
Length = 231
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 333 DDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHE 455
+ EE+E A LG+ + +E DVG+ TDE++R V +
Sbjct: 171 ESEEVEEQGGAISLGKVIEEEMIEEEDVGLPTDELNRRVED 211
>07_03_1208 -
24896905-24896931,24897330-24897341,24898058-24898333,
24898410-24898466,24898561-24898638,24899112-24899198,
24899815-24899904,24900012-24900218
Length = 277
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +3
Query: 312 SAQIKILDDEEIEGMRVACRLGREVLDEAARVCDV---GVSTDEIDR 443
S+ KIL+ +E E + CR R LD A+ V DV G+ T EI +
Sbjct: 122 SSSSKILNADEKEMVSTVCRKARLALDLASEVMDVAAFGLGTTEISQ 168
>11_04_0167 + 14382976-14385244,14389373-14389842
Length = 912
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 660 TFPTKKVSFRSPWKPLW*TVTSTLHMSPSCNGRKSGIP*HITSLIEVQQLLGNYNNSGDL 481
TF S P+ + T+ S ++ S N G+P ++SLI ++ L N S D
Sbjct: 165 TFSASNASISGPFPAVLATLVSLRNLRLSYNNLTGGLPPELSSLIAMESLQLNNQRSDDK 224
Query: 480 GNIPV 466
+ P+
Sbjct: 225 LSGPI 229
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +3
Query: 195 GKAETVPGRAKTHCAASYRSPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRL 374
G ++TVPG +T A Y DH FP + A+ + + +D++ + A +
Sbjct: 229 GDSDTVPGNKETDDPAKEDDTAYLDHKESFPEDKVIAEHADEEVKAEDQQ---SKQADDM 285
Query: 375 GREVLDE 395
EVL E
Sbjct: 286 DAEVLQE 292
>07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026
Length = 961
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 199 KLRPFPAGPKRTVPPHIGRRITLIIRPGSR-LQSMLLKVQLKSRSLTMK 342
K+RPF A P+ P+ R ++ G+R L+S L++ R + ++
Sbjct: 345 KIRPFVAAPEADAQPYSFRATATVLNSGTRALRSWTLRLTFHHREILVQ 393
>11_06_0524 + 24576782-24577268,24577402-24578517,24578658-24578797
Length = 580
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 163 EYNPWPSYTFTGKLRPFPAGPKRTVPPHIGRRITLIIRPGS 285
++N PSY F L R VP H+ RI +I+ G+
Sbjct: 327 QHNTMPSYYFHANLTGLMHPKHRRVPMHVDERIFIILGLGT 367
>07_01_0137 +
1005818-1006852,1007645-1007827,1008398-1008616,
1008682-1008690
Length = 481
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = +1
Query: 7 CKSIAQLQCPTCIKLGIKGSFFCNQDC---FKKSWKTHKII 120
C S+ +L+ T I L ++ C+ DC +WKT +++
Sbjct: 389 CTSVRRLKLVTHISLDLEAQAVCSSDCVCDLPPNWKTEELL 429
>12_02_0370 +
18139557-18140469,18140561-18140704,18140804-18140956,
18141032-18141147,18141231-18141398,18142110-18142334,
18142458-18142577
Length = 612
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 294 EYAAKGSAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEID-RVVHEACIER 470
EYA K A+ K+L DE++E +R ++ + + G D + VV E C
Sbjct: 175 EYACKSIAKRKLLTDEDVEDVRREIQIMHHLAGHPNIISIRGAYEDAVAVHVVMELCAGG 234
Query: 471 ECY 479
E +
Sbjct: 235 ELF 237
>11_04_0365 -
16818468-16818514,16818619-16821706,16822860-16822919,
16823595-16823954
Length = 1184
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 466 SMQASWTTRSISSVLTPTSHTLAASSRTS 380
SM W +SS+LTP T ASS +S
Sbjct: 7 SMAVKWAIDKLSSLLTPVRQTPVASSSSS 35
>10_01_0315 -
3454846-3455465,3455562-3455663,3455828-3455954,
3456698-3456727,3456828-3456877,3457004-3457106
Length = 343
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 459 CIERECYPSPLNYYNFPTVVV 521
C+E + +P+ +N NFP+VVV
Sbjct: 307 CLETQGFPNAINQPNFPSVVV 327
>04_04_0115 +
22868554-22868749,22868863-22868912,22870009-22870195,
22870226-22870333,22872501-22873165
Length = 401
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 459 CIERECYPSPLNYYNFPTVVV 521
C+E + +P +N+ NFP+V+V
Sbjct: 365 CLETQGFPDAVNHPNFPSVIV 385
>09_01_0042 +
764349-764763,764853-764902,765096-765172,766179-766236,
767481-767607,768665-768769,768842-769424,769470-769775,
770048-770139,770391-770440
Length = 620
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 459 CIERECYPSPLNYYNFPTVVV 521
C+E + +P+ +N NFP+VVV
Sbjct: 447 CLETQGFPNAVNQPNFPSVVV 467
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 315 AQIKILD-DEEIEGMRVACRLGREVLDEAARVCDVG-VSTDEIDRVVHEACIERE 473
A+I++LD IEG + GR+V+ AR C+V + D I + H+ IE+E
Sbjct: 122 AKIQLLDLPGIIEGAKDGKGRGRQVIS-TARTCNVILIVLDAIKPITHKRLIEKE 175
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,092,241
Number of Sequences: 37544
Number of extensions: 447964
Number of successful extensions: 1330
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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