Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00997
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024757-4|AAK68429.2|  371|Caenorhabditis elegans Methionine am...   122   3e-28
AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical ...    31   1.1  
Z46794-3|CAA86783.1|  429|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa...    29   2.5  
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as...    29   2.5  

>AC024757-4|AAK68429.2|  371|Caenorhabditis elegans Methionine
           aminopeptidase protein 1 protein.
          Length = 371

 Score =  122 bits (293), Expect = 3e-28
 Identities = 54/85 (63%), Positives = 64/85 (75%)
 Frame = +3

Query: 255 PDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDE 434
           PDYA HP G    E  +K    IK+L DEE EG++VAC+LGRE L+EAA+ C  GV+T+E
Sbjct: 87  PDYALHPQGVSLEERQSKSERVIKVLTDEEKEGLKVACKLGRECLNEAAKACGPGVTTEE 146

Query: 435 IDRVVHEACIERECYPSPLNYYNFP 509
           IDRVVHEA IER+CYPSPL YY FP
Sbjct: 147 IDRVVHEAAIERDCYPSPLGYYKFP 171



 Score =  112 bits (269), Expect = 3e-25
 Identities = 47/61 (77%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
 Frame = +2

Query: 503 FPNSCCTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGN-VPETTRK 679
           FP SCCTS+NEVICHGIPD+R L++GD+CNVDVTVYHRGFHGDLNETF VG+ V E +RK
Sbjct: 170 FPKSCCTSVNEVICHGIPDMRKLENGDLCNVDVTVYHRGFHGDLNETFLVGDKVDEESRK 229

Query: 680 I 682
           +
Sbjct: 230 L 230



 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 40/84 (47%), Positives = 50/84 (59%)
 Frame = +1

Query: 4   GCKSIAQLQCPTCIKLGIKGSFFCNQDCFKKSWKTHKIIHSLAKGDNTDAANVEYNPWPS 183
           GC+  A+L+CPTCIK+ +  ++FC+Q CFK  W  HK  HS   G         YNPWP 
Sbjct: 11  GCQKPAKLRCPTCIKMSLPDAYFCDQSCFKAFWPIHKFSHSDVNG--------PYNPWPC 62

Query: 184 YTFTGKLRPFPAGPKRTVPPHIGR 255
           Y+FTG LRP     +R VP HI R
Sbjct: 63  YSFTGSLRPGRVTDRRPVPDHIPR 86


>AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical
           protein Y116A8A.9 protein.
          Length = 444

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +2

Query: 503 FPNSCCTSINEVICHGIP---DLRPLQDGDICNVDVTVYHRG 619
           FP  C  S+N    H  P   D   LQ GD+C +D  ++ RG
Sbjct: 183 FPTGC--SLNHCAAHYTPNAGDTTVLQYGDVCKIDYGIHVRG 222


>Z46794-3|CAA86783.1|  429|Caenorhabditis elegans Hypothetical
           protein R06F6.4 protein.
          Length = 429

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 13  SIAQLQ-CPTCIKLGIKGSFFCNQDCFKKSWKTHKIIHSLAKGDNTDAAN 159
           S+A+L+ C  C +L      +C+Q+C +  WK HK+     K  N + AN
Sbjct: 32  SMAELKKCSACRRLA-----YCSQECQRADWKLHKVECKAIKTHN-EVAN 75


>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
            protein kinase protein.
          Length = 1425

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
 Frame = +3

Query: 192  YGKAETVPGRA-KTHCAASYRSPDYADHPTGFPAS---EYAAKGSAQIKILDDEEIEGMR 359
            +  AE  PG + + H  +     ++ +HP  FP     E   + S  +K   DEE     
Sbjct: 1218 HAAAEVGPGISLERHFISPKHLKEHREHPALFPPESMMEMQQRESLSVKGTQDEEELFTD 1277

Query: 360  VACRLGREVLDEAARVCDVGVSTDEIDRVVHEACI 464
            V C   R+V        DVGV+  ++      AC+
Sbjct: 1278 VVCFGSRDVARHLTLGIDVGVADLQMASRCELACL 1312


>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
            (death-associated protein)kinase homolog protein 1
            protein.
          Length = 1425

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
 Frame = +3

Query: 192  YGKAETVPGRA-KTHCAASYRSPDYADHPTGFPAS---EYAAKGSAQIKILDDEEIEGMR 359
            +  AE  PG + + H  +     ++ +HP  FP     E   + S  +K   DEE     
Sbjct: 1218 HAAAEVGPGISLERHFISPKHLKEHREHPALFPPESMMEMQQRESLSVKGTQDEEELFTD 1277

Query: 360  VACRLGREVLDEAARVCDVGVSTDEIDRVVHEACI 464
            V C   R+V        DVGV+  ++      AC+
Sbjct: 1278 VVCFGSRDVARHLTLGIDVGVADLQMASRCELACL 1312


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,962,864
Number of Sequences: 27780
Number of extensions: 376792
Number of successful extensions: 1015
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)