BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00997 (713 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g45240.1 68415.m05632 methionyl aminopeptidase, putative / me... 105 2e-23 At4g37040.1 68417.m05246 metallopeptidase M24 family protein sim... 97 8e-21 At1g13270.2 68414.m01540 metallopeptidase M24 family protein sim... 87 1e-17 At1g13270.1 68414.m01541 metallopeptidase M24 family protein sim... 87 1e-17 At3g25740.1 68416.m03205 metallopeptidase M24 family protein sim... 80 1e-15 At3g58560.1 68416.m06527 endonuclease/exonuclease/phosphatase fa... 40 0.002 At3g58580.1 68416.m06529 endonuclease/exonuclease/phosphatase fa... 36 0.035 At3g01640.1 68416.m00095 GHMP kinase family protein contains GHM... 29 2.3 At1g69770.1 68414.m08028 chromomethylase 3 (CMT3) nearly identic... 29 2.3 At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ... 29 3.1 At3g51800.2 68416.m05681 metallopeptidase M24 family protein sim... 29 3.1 At3g51800.1 68416.m05680 metallopeptidase M24 family protein sim... 29 3.1 At3g17940.1 68416.m02284 aldose 1-epimerase family protein simil... 29 4.0 At5g37450.1 68418.m04507 leucine-rich repeat transmembrane prote... 28 5.3 At3g13060.2 68416.m01628 expressed protein contains Pfam profile... 28 5.3 At3g13060.1 68416.m01627 expressed protein contains Pfam profile... 28 5.3 At2g46700.1 68415.m05827 calcium-dependent protein kinase, putat... 28 5.3 At2g17010.1 68415.m01961 mechanosensitive ion channel domain-con... 28 5.3 At4g39520.1 68417.m05588 GTP-binding protein, putative similar t... 27 9.3 At2g30090.1 68415.m03662 GCN5-related N-acetyltransferase (GNAT)... 27 9.3 >At2g45240.1 68415.m05632 methionyl aminopeptidase, putative / methionine aminopeptidase, putative / peptidase M, putative similar to SP|Q01662 Methionine aminopeptidase 1 precursor (EC 3.4.11.18) {Saccharomyces cerevisiae}; contains Pfam profile PF00557: metallopeptidase family M24 Length = 398 Score = 105 bits (253), Expect = 2e-23 Identities = 44/60 (73%), Positives = 52/60 (86%) Frame = +2 Query: 503 FPNSCCTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKI 682 FP SCCTS+NEVICHGIPD R L+DGDI NVDVTV ++G HGDLNET+FVGNV E +R++ Sbjct: 200 FPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVCYKGCHGDLNETYFVGNVDEASRQL 259 Score = 85.8 bits (203), Expect = 3e-17 Identities = 49/105 (46%), Positives = 59/105 (56%) Frame = +3 Query: 195 GKAETVPGRAKTHCAASYRSPDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRL 374 G + P K A PD+A G P E + ++I E+I+ MR C++ Sbjct: 99 GPLKQYPISTKRVVPAEIEKPDWAID--GTPKVEPNSDLQHVVEIKTPEQIQRMRETCKI 156 Query: 375 GREVLDEAARVCDVGVSTDEIDRVVHEACIERECYPSPLNYYNFP 509 REVLD AARV GV+TDEIDRVVHEA I YPSPLNYY FP Sbjct: 157 AREVLDAAARVIHPGVTTDEIDRVVHEATIAAGGYPSPLNYYFFP 201 Score = 56.0 bits (129), Expect = 2e-08 Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 18/99 (18%) Frame = +1 Query: 7 CKSIAQLQCPTCI--KLGIKGSFFCNQDCFKKSWKTHKIIHSLAK----GD-NTDAANVE 165 C+ A LQCP CI KL + + FC Q+CFK +W +HK +H A+ GD N+D + Sbjct: 18 CEKPAHLQCPKCIDLKLPREQASFCTQECFKAAWSSHKSVHVKAQLSSIGDQNSDLISQG 77 Query: 166 Y----------NP-WPSYTFTGKLRPFPAGPKRTVPPHI 249 + P P + +TG L+ +P KR VP I Sbjct: 78 WLYCVKKGQARTPKLPHFDWTGPLKQYPISTKRVVPAEI 116 >At4g37040.1 68417.m05246 metallopeptidase M24 family protein similar to SP|O33343 Methionine aminopeptidase (EC 3.4.11.18) (Peptidase M) {Mycobacterium tuberculosis}; contains Pfam profile PF00557: metallopeptidase family M24 Length = 350 Score = 97.5 bits (232), Expect = 8e-21 Identities = 40/60 (66%), Positives = 47/60 (78%) Frame = +2 Query: 503 FPNSCCTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKI 682 FP S CTS+NE ICHGIPD RPL+DGDI N+DVTVY G+HGD + TFF GNV E +K+ Sbjct: 166 FPKSVCTSVNECICHGIPDSRPLEDGDIINIDVTVYLNGYHGDTSATFFCGNVDEKAKKL 225 Score = 56.8 bits (131), Expect = 1e-08 Identities = 30/69 (43%), Positives = 38/69 (55%) Frame = +3 Query: 312 SAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDEIDRVVHEACIERECYPSPL 491 S+ +++ D + IE MR + L V D A + GV+TDEID VH IE YPSPL Sbjct: 102 SSGLEVHDKKGIECMRASGILAARVRDYAGTLVKPGVTTDEIDEAVHNMIIENGAYPSPL 161 Query: 492 NYYNFPTVV 518 Y FP V Sbjct: 162 GYGGFPKSV 170 >At1g13270.2 68414.m01540 metallopeptidase M24 family protein similar to SP|Q01662 Methionine aminopeptidase 1 precursor (EC 3.4.11.18) {Saccharomyces cerevisiae}; contains Pfam profile PF00557: metallopeptidase family M24 Length = 283 Score = 86.6 bits (205), Expect = 1e-17 Identities = 36/60 (60%), Positives = 44/60 (73%) Frame = +2 Query: 503 FPNSCCTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKI 682 FP S CTS+NE +CHGIPD R LQ GDI N+DVTVY G+HGD + TFF G V E +++ Sbjct: 185 FPKSVCTSVNECMCHGIPDSRQLQSGDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKRL 244 Score = 60.9 bits (141), Expect = 8e-10 Identities = 44/153 (28%), Positives = 65/153 (42%) Frame = +3 Query: 255 PDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDE 434 PD+ P + S S++ +I E I MR AC L VL+ A + V+T+E Sbjct: 103 PDHIPRPP-YVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYAGTLVKPSVTTNE 161 Query: 435 IDRVVHEACIERECYPSPLNYYNFPTVVVLQLMRLYVMEYQIYVHYRMGTYAMLM*QFTI 614 ID+ VH+ IE YPSPL Y FP V + + G + + Sbjct: 162 IDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINIDVTVYL 221 Query: 615 EVSMVI*MKPFLLGMYQRLLVKLVQVTHECLQK 713 + + F G +LV+VT ECL++ Sbjct: 222 DGYHGDTSRTFFCGEVDEGFKRLVKVTEECLER 254 >At1g13270.1 68414.m01541 metallopeptidase M24 family protein similar to SP|Q01662 Methionine aminopeptidase 1 precursor (EC 3.4.11.18) {Saccharomyces cerevisiae}; contains Pfam profile PF00557: metallopeptidase family M24 Length = 369 Score = 86.6 bits (205), Expect = 1e-17 Identities = 36/60 (60%), Positives = 44/60 (73%) Frame = +2 Query: 503 FPNSCCTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKI 682 FP S CTS+NE +CHGIPD R LQ GDI N+DVTVY G+HGD + TFF G V E +++ Sbjct: 185 FPKSVCTSVNECMCHGIPDSRQLQSGDIINIDVTVYLDGYHGDTSRTFFCGEVDEGFKRL 244 Score = 60.9 bits (141), Expect = 8e-10 Identities = 44/153 (28%), Positives = 65/153 (42%) Frame = +3 Query: 255 PDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDE 434 PD+ P + S S++ +I E I MR AC L VL+ A + V+T+E Sbjct: 103 PDHIPRPP-YVESGVLPDISSEFQIPGPEGIAKMRAACELAARVLNYAGTLVKPSVTTNE 161 Query: 435 IDRVVHEACIERECYPSPLNYYNFPTVVVLQLMRLYVMEYQIYVHYRMGTYAMLM*QFTI 614 ID+ VH+ IE YPSPL Y FP V + + G + + Sbjct: 162 IDKAVHDMIIEAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQSGDIINIDVTVYL 221 Query: 615 EVSMVI*MKPFLLGMYQRLLVKLVQVTHECLQK 713 + + F G +LV+VT ECL++ Sbjct: 222 DGYHGDTSRTFFCGEVDEGFKRLVKVTEECLER 254 >At3g25740.1 68416.m03205 metallopeptidase M24 family protein similar to SP|O33343 Methionine aminopeptidase (EC 3.4.11.18) (Peptidase M) {Mycobacterium tuberculosis}; contains Pfam profile PF00557: metallopeptidase family M24 Length = 344 Score = 80.2 bits (189), Expect = 1e-15 Identities = 33/60 (55%), Positives = 45/60 (75%) Frame = +2 Query: 503 FPNSCCTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRKI 682 FP S CTS+NE + HGIPD RPLQ+GDI N+DV VY G+HGD ++TF G+V + +++ Sbjct: 158 FPKSVCTSVNECMFHGIPDSRPLQNGDIINIDVAVYLDGYHGDTSKTFLCGDVNGSLKQL 217 Score = 64.5 bits (150), Expect = 7e-11 Identities = 49/153 (32%), Positives = 69/153 (45%) Frame = +3 Query: 255 PDYADHPTGFPASEYAAKGSAQIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVSTDE 434 PD+ P + S + S++++I D I M+ AC L VLD A + V+TDE Sbjct: 76 PDHILKPL-YVESSKVPEISSELQIPDSIGIVKMKKACELAARVLDYAGTLVRPFVTTDE 134 Query: 435 IDRVVHEACIERECYPSPLNYYNFPTVVVLQLMRLYVMEYQIYVHYRMGTYAMLM*QFTI 614 ID+ VH+ IE YPSPL Y FP V + + G + + Sbjct: 135 IDKAVHQMVIEFGAYPSPLGYGGFPKSVCTSVNECMFHGIPDSRPLQNGDIINIDVAVYL 194 Query: 615 EVSMVI*MKPFLLGMYQRLLVKLVQVTHECLQK 713 + K FL G L +LV+VT ECL+K Sbjct: 195 DGYHGDTSKTFLCGDVNGSLKQLVKVTEECLEK 227 >At3g58560.1 68416.m06527 endonuclease/exonuclease/phosphatase family protein similar to SP|P31384 Glucose-repressible alcohol dehydrogenase transcriptional effector (Carbon catabolite repressor protein 4) {Saccharomyces cerevisiae}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family Length = 602 Score = 39.5 bits (88), Expect = 0.002 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = +1 Query: 19 AQLQCPTCIK--LGIKGSFFCNQDCFKKSWKTHKIIHSLAKGDNTDAANVEYNP 174 A LQC C+K + + S+ C+ CF +W+ H+++H A T+ + E P Sbjct: 73 ATLQCLGCLKSKVPVAKSYHCSTKCFSDAWQHHRVLHERAASAATEGNDEEELP 126 >At3g58580.1 68416.m06529 endonuclease/exonuclease/phosphatase family protein similar to SP|P31384 Glucose-repressible alcohol dehydrogenase transcriptional effector (Carbon catabolite repressor protein 4) {Saccharomyces cerevisiae}; contains Pfam profile PF03372: Endonuclease/Exonuclease/phosphatase family Length = 605 Score = 35.5 bits (78), Expect = 0.035 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = +1 Query: 19 AQLQCPTCIKLG--IKGSFFCNQDCFKKSWKTHKIIHSLAKGDN 144 A LQC C K + S+ C+ CF +W+ H+ +H A +N Sbjct: 73 ATLQCVFCSKRRSLVPKSYHCSPKCFTDAWQHHRTLHERAAAEN 116 >At3g01640.1 68416.m00095 GHMP kinase family protein contains GHMP kinases putative ATP-binding protein domain, Pfam:PF00288 Length = 362 Score = 29.5 bits (63), Expect = 2.3 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Frame = -1 Query: 179 GHGLYSTFAASVLSP----FANE*IIL*VFHDFLKQSWLQKNEPLIPSLIQVG 33 GHG+Y+ S+L P +A H ++Q WL +E +I S+ +VG Sbjct: 202 GHGIYTPMDISLLPPLHLIYAENPSDSGKVHSMVRQRWLDGDEFIISSMKEVG 254 >At1g69770.1 68414.m08028 chromomethylase 3 (CMT3) nearly identical to chromomethylase CMT3 [Arabidopsis thaliana] GI:14583092, GI:14647157 Length = 839 Score = 29.5 bits (63), Expect = 2.3 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +3 Query: 285 PASEYAAKGSAQIKILDDEEIEGMRVACRLGREVLDE 395 P K S++ K DDE++E +R C R ++DE Sbjct: 70 PIEVQPPKASSRKKTKDDEKVEIIRARCHYRRAIVDE 106 >At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ domain-containing protein contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain Length = 586 Score = 29.1 bits (62), Expect = 3.1 Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Frame = +1 Query: 40 CIKLGIKGSFFCNQDCFKKSWK---THKIIHSLAKGDNTDA-ANVEYNPWPSYTFTGKLR 207 CI L + FF QD FKK K T K + L + A A+ + + SY +TG+L+ Sbjct: 76 CI-LAARSKFF--QDLFKKEKKISKTEKPKYQLREMLPYGAVAHEAFLYFLSYIYTGRLK 132 Query: 208 PFPAGPKRTVPP 243 PFP V P Sbjct: 133 PFPLEVSTCVDP 144 >At3g51800.2 68416.m05681 metallopeptidase M24 family protein similar to SP|P50580 Proliferation-associated protein 2G4 {Mus musculus}; contains Pfam profile PF00557: metallopeptidase family M24 Length = 401 Score = 29.1 bits (62), Expect = 3.1 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = +2 Query: 518 CTSINEVICHGIP---DLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRK 679 C S+N + H P D L+DGD+ +D+ + GF + T + P + RK Sbjct: 82 CISVNNTVGHFSPLASDESVLEDGDMVKIDMGCHIDGFIALVGHTHVLQEGPLSGRK 138 >At3g51800.1 68416.m05680 metallopeptidase M24 family protein similar to SP|P50580 Proliferation-associated protein 2G4 {Mus musculus}; contains Pfam profile PF00557: metallopeptidase family M24 Length = 392 Score = 29.1 bits (62), Expect = 3.1 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Frame = +2 Query: 518 CTSINEVICHGIP---DLRPLQDGDICNVDVTVYHRGFHGDLNETFFVGNVPETTRK 679 C S+N + H P D L+DGD+ +D+ + GF + T + P + RK Sbjct: 82 CISVNNTVGHFSPLASDESVLEDGDMVKIDMGCHIDGFIALVGHTHVLQEGPLSGRK 138 >At3g17940.1 68416.m02284 aldose 1-epimerase family protein similar to ALDOSE 1-EPIMERASE PRECURSOR GB:P05149 [SP|P05149] from [Acinetobacter calcoaceticus]; contains Pfam profile PF01263 Aldose 1-epimerase Length = 341 Score = 28.7 bits (61), Expect = 4.0 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = +3 Query: 459 CIERECYPSPLNYYNFPTVVV 521 C+E + +P+ +N NFP+VVV Sbjct: 305 CLETQGFPNAINQSNFPSVVV 325 >At5g37450.1 68418.m04507 leucine-rich repeat transmembrane protein kinase, putative Length = 935 Score = 28.3 bits (60), Expect = 5.3 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 4/77 (5%) Frame = +3 Query: 252 SPDYADHPTGFPASEYAAKGSA-QIKILDDEEIEGMRVACRLGREVLDEAARVCDVGVST 428 +P Y D P + + K + I+ E + GMR GR ++ E CD G+ Sbjct: 775 TPGYVD-PEYYLSHRLTEKSDVYSLGIVFLEILTGMRPISH-GRNIVREVNEACDAGMMM 832 Query: 429 DEIDRVV---HEACIER 470 IDR + E C++R Sbjct: 833 SVIDRSMGQYSEECVKR 849 >At3g13060.2 68416.m01628 expressed protein contains Pfam profile PF04146: YT521-B-like family Length = 634 Score = 28.3 bits (60), Expect = 5.3 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +2 Query: 5 GANQSHNYNALLVSNSGLKARSFVTKTVSKNRGRL 109 G Q NY + L+SN G+ + ++ S+ RGR+ Sbjct: 296 GRGQGSNYGSRLISNVGMGNQGWIGVDNSRGRGRV 330 >At3g13060.1 68416.m01627 expressed protein contains Pfam profile PF04146: YT521-B-like family Length = 551 Score = 28.3 bits (60), Expect = 5.3 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +2 Query: 5 GANQSHNYNALLVSNSGLKARSFVTKTVSKNRGRL 109 G Q NY + L+SN G+ + ++ S+ RGR+ Sbjct: 296 GRGQGSNYGSRLISNVGMGNQGWIGVDNSRGRGRV 330 >At2g46700.1 68415.m05827 calcium-dependent protein kinase, putative / CDPK, putative similar to calcium/calmodulin-dependent protein kinase homolog MCK1 [Zea mays] gi|1839597|gb|AAB47181 Length = 595 Score = 28.3 bits (60), Expect = 5.3 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Frame = +1 Query: 133 KGDNTDAANVEYNPWPSYTFTGKLRPFPAG----PKRT-VPPHIGRRITLIIRPGSRLQS 297 + NT A + +PWPS G P P+G P RT P RR P +++ Sbjct: 43 RAKNTPARSSNPSPWPSPFPHGSASPLPSGVSPSPARTSTPRRFFRRPFPPPSPAKHIKA 102 Query: 298 MLLK 309 L+K Sbjct: 103 SLIK 106 >At2g17010.1 68415.m01961 mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein contains Pfam profile PF00924: Mechanosensitive ion channel Length = 779 Score = 28.3 bits (60), Expect = 5.3 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Frame = +3 Query: 315 AQIKILDDEEIEGMRVA---C-RLGREVLDEAARVCDVGVSTDEIDRVVHEACIERECYP 482 A+I + D E++ +R+A C R+ + D A R V +E+ +++ E I+ YP Sbjct: 696 AKIIVKDLEDLHIVRLAIWPCHRINHQ--DMAERWTRRAVLVEEVIKILLELDIQHRFYP 753 Query: 483 SPLNYYNFPTVV 518 +N PTVV Sbjct: 754 LDINVRTMPTVV 765 >At4g39520.1 68417.m05588 GTP-binding protein, putative similar to SP|Q9Y295 Developmentally regulated GTP-binding protein 1 (DRG 1) {Homo sapiens}; contains Pfam profiles PF02824: TGS domain, PF01018: GTP1/OBG family Length = 369 Score = 27.5 bits (58), Expect = 9.3 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%) Frame = +3 Query: 315 AQIKILD-DEEIEGMRVACRLGREVLDEAARVCD-VGVSTDEIDRVVHEACIERE 473 A+I++LD IEG + GR+V+ AR C+ + + D I + H+ IE+E Sbjct: 112 AKIQLLDLPGIIEGAKDGKGRGRQVIS-TARTCNCILIVLDAIKPITHKRLIEKE 165 >At2g30090.1 68415.m03662 GCN5-related N-acetyltransferase (GNAT) family protein contains Pfam profile PF00583: acetyltransferase, GNAT family Length = 386 Score = 27.5 bits (58), Expect = 9.3 Identities = 11/38 (28%), Positives = 18/38 (47%) Frame = +2 Query: 518 CTSINEVICHGIPDLRPLQDGDICNVDVTVYHRGFHGD 631 C + +C + ++ L DG C V V +G +GD Sbjct: 298 CGKLVRALCEHVHNMAALNDGCACKVVVVEVDKGSNGD 335 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,080,016 Number of Sequences: 28952 Number of extensions: 351807 Number of successful extensions: 973 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 941 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 972 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1545769616 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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