Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00996
         (712 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   144   7e-35
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    32   0.35 
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z81484-7|CAE11296.1|  221|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  144 bits (348), Expect = 7e-35
 Identities = 64/77 (83%), Positives = 72/77 (93%)
 Frame = +1

Query: 1   GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
           GKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV  Q+AYS+IEGD +V +AYSHELPR
Sbjct: 26  GKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPR 85

Query: 181 YGVKVGLTNYAAAYSTG 231
           YG+KVGLTNYAAAY+TG
Sbjct: 86  YGLKVGLTNYAAAYATG 102



 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
 Frame = +3

Query: 309 EYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAES 485
           +YNVE   D  P  F+  LD+GLARTTTG+++F  MKG  DGG+NVPHS  RF G+D ES
Sbjct: 129 DYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQES 186

Query: 486 KKFNAE 503
           K++NAE
Sbjct: 187 KEYNAE 192



 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 34/67 (50%), Positives = 45/67 (67%)
 Frame = +2

Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKK 688
           R  I G HVA+YM  L+++DED +KRQFSK++  G+ AD + A Y+K H AIRAD S   
Sbjct: 195 RDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPAA 254

Query: 689 KELKKDS 709
           K+  K S
Sbjct: 255 KKAAKPS 261


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
 Frame = +3

Query: 315 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 491
           N EP++   G F C+L       TT+G+R  G      +  L    + ++FPG    +  
Sbjct: 68  NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127

Query: 492 FNAEVQGLTSLVCM 533
           F  +   ++   C+
Sbjct: 128 FIIKTFSISMEECL 141


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 160  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 47
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 160  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 47
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 55  YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 174
           YN P+YR +++L  K   C+     + GD++   +CA +  EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588


>Z81484-7|CAE11296.1|  221|Caenorhabditis elegans Hypothetical
           protein C47A10.7 protein.
          Length = 221

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 10/28 (35%), Positives = 22/28 (78%)
 Frame = +3

Query: 492 FNAEVQGLTSLVCMLLNT*EVLNRMMRI 575
           F+A+VQG T+L+C++++   VL+ ++ +
Sbjct: 162 FSADVQGTTNLICIIVSMHGVLSTLVMV 189


>Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 202 SDQPSHHNVATHVNKQRTQYGHLQSESRP 116
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical
           protein T23B5.3b protein.
          Length = 540

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 202 SDQPSHHNVATHVNKQRTQYGHLQSESRP 116
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 202 SDQPSHHNVATHVNKQRTQYGHLQSESRP 116
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,305,873
Number of Sequences: 27780
Number of extensions: 336468
Number of successful extensions: 866
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)