Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00995
(692 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 150 4e-35
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 149 6e-35
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 144 2e-33
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 132 8e-30
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 127 3e-28
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 114 2e-24
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 112 9e-24
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 108 1e-22
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 104 2e-21
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 94 3e-18
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 81 3e-14
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 76 7e-13
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 3e-12
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 72 1e-11
UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4; Spermato... 64 2e-09
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 63 7e-09
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 61 2e-08
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 54 3e-06
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 54 3e-06
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 48 2e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 4e-04
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 44 0.005
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 42 0.019
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 37 0.41
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 36 1.2
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 150 bits (363), Expect = 4e-35
Identities = 64/77 (83%), Positives = 74/77 (96%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 26 GKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPK 85
Query: 181 YGVKVGLTNYAAAYSTG 231
YGVKVGLTNYAAAY TG
Sbjct: 86 YGVKVGLTNYAAAYCTG 102
Score = 120 bits (289), Expect = 3e-26
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 489 KFNAEV 506
+FNAEV
Sbjct: 189 EFNAEV 194
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R HI G +VA+YMR L ++DED++K+QFS+YI+ VT D +E +YKKAH AIR +P ++K
Sbjct: 196 RKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEK 255
Query: 689 K 691
K
Sbjct: 256 K 256
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 149 bits (361), Expect = 6e-35
Identities = 65/77 (84%), Positives = 72/77 (93%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+T Q+AY+RIEGD +VCAAYSHELP+
Sbjct: 26 GKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPK 85
Query: 181 YGVKVGLTNYAAAYSTG 231
YG++VGLTNYAAAY TG
Sbjct: 86 YGIQVGLTNYAAAYCTG 102
Score = 132 bits (320), Expect = 6e-30
Identities = 57/66 (86%), Positives = 64/66 (96%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+KRFPGY AE+K
Sbjct: 129 EFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETK 188
Query: 489 KFNAEV 506
FNA+V
Sbjct: 189 SFNADV 194
Score = 101 bits (243), Expect = 1e-20
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHK 685
RAHIFG HVA+YMRSLE++DE+SFKRQFS+YI+LG+ AD +E IYKKAH+AIR DP+HK
Sbjct: 196 RAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHK 254
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 144 bits (348), Expect = 2e-33
Identities = 64/77 (83%), Positives = 72/77 (93%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPR
Sbjct: 26 GKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPR 85
Query: 181 YGVKVGLTNYAAAYSTG 231
YG+KVGLTNYAAAY+TG
Sbjct: 86 YGLKVGLTNYAAAYATG 102
Score = 83.8 bits (198), Expect = 4e-15
Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Frame = +3
Query: 309 EYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAES 485
+YNVE D P F+ LD+GLARTTTG+++F MKG DGG+NVPHS RF G+D ES
Sbjct: 129 DYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQES 186
Query: 486 KKFNAE 503
K++NAE
Sbjct: 187 KEYNAE 192
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R I G HVA+YM L+++DED +KRQFSK++ G+ AD + A Y+K H AIRAD S
Sbjct: 195 RDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPAA 254
Query: 689 K 691
K
Sbjct: 255 K 255
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 132 bits (319), Expect = 8e-30
Identities = 57/64 (89%), Positives = 62/64 (96%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+TCQ+AYSRIEGD I+CAAYSHELPR
Sbjct: 26 GKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDITCQIAYSRIEGDKILCAAYSHELPR 85
Query: 181 YGVK 192
YGVK
Sbjct: 86 YGVK 89
Score = 126 bits (304), Expect = 5e-28
Identities = 57/65 (87%), Positives = 59/65 (90%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+PHS KRFPGYDAESK
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNIPHSTKRFPGYDAESK 157
Query: 489 KFNAE 503
FNAE
Sbjct: 158 TFNAE 162
Score = 97.5 bits (232), Expect = 3e-19
Identities = 43/60 (71%), Positives = 52/60 (86%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
RAHIFG HVA+YM +LE +D ++FKRQFS+YI+LG+ AD IE IYKKAH+AIRADPS KK
Sbjct: 165 RAHIFGQHVADYMHALEDEDAEAFKRQFSQYIKLGIAADQIETIYKKAHDAIRADPSIKK 224
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 127 bits (306), Expect = 3e-28
Identities = 52/76 (68%), Positives = 64/76 (84%)
Frame = +1
Query: 4 KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRY 183
KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQV Y+ + GD +CAAYSHELP+Y
Sbjct: 36 KTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQVVYATLSGDVTICAAYSHELPKY 95
Query: 184 GVKVGLTNYAAAYSTG 231
G+K GLTNYAA Y+TG
Sbjct: 96 GMKAGLTNYAATYATG 111
Score = 85.0 bits (201), Expect = 2e-15
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
+Y+VE D F+C+LD GL RT+TGARVF A+KGAVDGGL++PH+ KRF GYD + K
Sbjct: 138 DYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKRFAGYDLQDK 197
Query: 489 KFNAE 503
+ +
Sbjct: 198 SHDPD 202
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +2
Query: 515 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKKK 691
+I G VAEY +++++ + F++ F+KY+ +E ++ EAIR DP+H+KK
Sbjct: 207 YIKGGVVAEYAEEMQEEEPEKFEQHFAKYLAEDFDPTELEDAMEEVFEAIREDPTHEKK 265
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 114 bits (275), Expect = 2e-24
Identities = 46/77 (59%), Positives = 66/77 (85%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+ Q+ ++I GD +V AAY+HELP
Sbjct: 49 GKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDIIAQIVQAKIVGDEVVMAAYAHELPA 108
Query: 181 YGVKVGLTNYAAAYSTG 231
+G++ GLTNYAAAY+TG
Sbjct: 109 FGIEHGLTNYAAAYATG 125
Score = 79.0 bits (186), Expect = 1e-13
Identities = 35/53 (66%), Positives = 41/53 (77%)
Frame = +3
Query: 348 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 506
F+ LDVGLARTTTGARVFG +KGAVDGG+ VPH RFPGY+ E +A+V
Sbjct: 171 FKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHRPNRFPGYNKEKSSLDAKV 223
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQD---DEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPS 679
R IFG HVA+Y++ ++++ + D QFSKY+ V ++IE +YKKAH AIRADPS
Sbjct: 225 RDRIFGKHVADYLKQVKEEASSNPDEKCVQFSKYMAAKVLPESIEGMYKKAHAAIRADPS 284
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 112 bits (269), Expect = 9e-24
Identities = 49/77 (63%), Positives = 62/77 (80%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYAR RL+VQDK+KYN+PKYR +VR +N + CQV Y+ ++GD +V AA S EL R
Sbjct: 26 GKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKGDKVVAAAESTELKR 85
Query: 181 YGVKVGLTNYAAAYSTG 231
+G+ GLTNYAAAY+TG
Sbjct: 86 FGLTSGLTNYAAAYATG 102
Score = 63.7 bits (148), Expect = 4e-09
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +3
Query: 348 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 491
F LD+GL R+T G RVF A+KGA DGG+++PH+ +RFPG+ ++ K
Sbjct: 137 FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRFPGFSVDNDK 184
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 108 bits (259), Expect = 1e-22
Identities = 45/77 (58%), Positives = 61/77 (79%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CAA S+EL R
Sbjct: 315 GLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCAADSYELKR 374
Query: 181 YGVKVGLTNYAAAYSTG 231
+GV GL +YAAAY+TG
Sbjct: 375 FGVSTGLASYAAAYATG 391
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = +3
Query: 312 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY-----D 476
+NV+ F+ LD GL RTTTG RVFG +KGA DGG+N+PHS RFPGY +
Sbjct: 419 FNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPGYVRASDE 478
Query: 477 AESKKFNAE 503
ES K+ E
Sbjct: 479 GESSKYKPE 487
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQL--GVTADAIEAIYKKAHEAIRADPSH 682
+A IFG H+ YM+ L+ ++F++QFSK+ + D++E ++ K H IR +P
Sbjct: 490 KARIFGKHIDAYMKHLKGQSNEAFQKQFSKWSKTLEAAKVDSVEKLFTKVHAEIRKNPER 549
Query: 683 KK 688
K
Sbjct: 550 VK 551
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 104 bits (250), Expect = 2e-21
Identities = 49/77 (63%), Positives = 57/77 (74%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDY ARK L++QDKNKYN K R IVR +N + CQ+A S IEGD I+ A S EL R
Sbjct: 26 GKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIICQIASSHIEGDKILSEAKSKELIR 85
Query: 181 YGVKVGLTNYAAAYSTG 231
YG+ VGL NYAAAY+TG
Sbjct: 86 YGIPVGLKNYAAAYATG 102
Score = 66.5 bits (155), Expect = 6e-10
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +3
Query: 351 RCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAE 503
+ +LDVG+ RTTTG RVF A+KGA DGGLN+PH RFPG +FN E
Sbjct: 146 KAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGNNRFPG---SKNEFNPE 193
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R +I G+HVAEYM S++++D D +K F+ Y++ + + IE +Y AHE IR +P K
Sbjct: 196 RKNILGIHVAEYMASMKEEDMDKYKAHFNDYLKHKIDENNIEKMYLTAHEKIRKNPEKKA 255
Query: 689 K 691
K
Sbjct: 256 K 256
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 93.9 bits (223), Expect = 3e-18
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = +1
Query: 4 KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRY 183
KTDY R +L+ QDK KY KYRL+ R++N V Q+ + + GD VC A S ELP+Y
Sbjct: 26 KTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQIVVAELTGDKTVCQALSTELPKY 85
Query: 184 GVKVGLTNYAAAYSTG 231
G+K+GL+NY AAY+TG
Sbjct: 86 GIKLGLSNYPAAYATG 101
Score = 67.7 bits (158), Expect = 3e-10
Identities = 27/55 (49%), Positives = 43/55 (78%)
Frame = +2
Query: 515 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPS 679
+I G VA+YMR L+++ E+ + +QFS+Y++ G+TAD++E IYK AH AIR +P+
Sbjct: 204 YILGGAVADYMRKLKKESEEKYNKQFSRYVKAGITADSLEKIYKDAHAAIRKNPA 258
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = +3
Query: 348 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 461
F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R
Sbjct: 136 FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCR 173
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 81.0 bits (191), Expect = 3e-14
Identities = 35/77 (45%), Positives = 51/77 (66%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDY R ++ QD N + K+RL+VR++ V CQ+ + ++GD ++ A S EL R
Sbjct: 20 GKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYMDGDRVMVYADSRELER 79
Query: 181 YGVKVGLTNYAAAYSTG 231
YG+ G TNY+AAY+TG
Sbjct: 80 YGINFGATNYSAAYATG 96
Score = 66.9 bits (156), Expect = 4e-10
Identities = 34/65 (52%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Frame = +3
Query: 312 YNV-EPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
Y+V + +D A R +LD+GLAR+T GARVFGA+KGA D GLNVPHS +F G+ +
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKFYGHKPDG- 180
Query: 489 KFNAE 503
F+A+
Sbjct: 181 SFDAK 185
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 518 IFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKKK 691
IFG +++EYM+ L D + +K QFS YI+ G+ + I IYK A + I DP+ KKK
Sbjct: 191 IFGYNISEYMKQLRDGDPEKYKTQFSSYIKKGIDPEEIPRIYKSAFDKIAEDPTRKKK 248
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 76.2 bits (179), Expect = 7e-13
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +3
Query: 312 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VPHS KRFPGY + +
Sbjct: 79 YHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDEE 137
Score = 62.9 bits (146), Expect = 7e-09
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R IFG HVA YM L+++D + +++QFS Y++ G+ + A+E +Y KAHE IR +P
Sbjct: 148 RDRIFGAHVASYMEYLKEEDPERYRKQFSAYLKHGLESSALEDMYLKAHENIRKNPVRPT 207
Query: 689 K 691
K
Sbjct: 208 K 208
Score = 59.7 bits (138), Expect = 7e-08
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = +1
Query: 88 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 231
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTG 51
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +1
Query: 76 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 231
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = +3
Query: 369 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 506
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ SK+FNAEV
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEV 116
Score = 39.5 bits (88), Expect = 0.076
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +2
Query: 518 IFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAI 640
I G +V +YM L ++DED++K+Q +YI+ +T D +E I
Sbjct: 121 IMGQNVVDYMCFLMEEDEDAYKKQSLEYIKNNITPDMMEEI 161
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGD 141
GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+T Q+ + I GD
Sbjct: 37 GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGD 83
>UniRef50_P93779 Cluster: 60S ribosomal protein L5; n=4;
Spermatophyta|Rep: 60S ribosomal protein L5 - Solanum
melongena (Eggplant) (Aubergine)
Length = 121
Score = 64.5 bits (150), Expect = 2e-09
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R +I+G HVA YM L +D+ + ++ FS YI+ + D IE +YKK H AIR DPS KK
Sbjct: 14 RKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKK 73
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 62.9 bits (146), Expect = 7e-09
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G ++K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 489 KFNAEV 506
+ +A+V
Sbjct: 102 QLDAKV 107
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/77 (36%), Positives = 45/77 (58%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S ++GD I+ ++Y L +
Sbjct: 26 GKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDGDFILLSSYLKNLSK 85
Query: 181 YGVKVGLTNYAAAYSTG 231
K NY +Y G
Sbjct: 86 LEYKNLTNNYPFSYLLG 102
Score = 46.0 bits (104), Expect = 9e-04
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Frame = +3
Query: 360 LDVGLARTTTGARVFGAMKGAVDGGLNVPHS---IKRFPGYDAESKK-FNAEVQGL 515
+D+GL R T G + F +MKG+VD G+N+PH+ I + + +SK+ FN +G+
Sbjct: 132 IDIGLKRATIGNKSFASMKGSVDSGINIPHNYNKIFKVKNNEIDSKELFNERSKGI 187
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 54.0 bits (124), Expect = 3e-06
Identities = 31/77 (40%), Positives = 42/77 (54%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYY R L+ TP R++VR +N+ + Q+ +EGD + AAYS EL
Sbjct: 17 GKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDSTLVAAYSAELAG 69
Query: 181 YGVKVGLTNYAAAYSTG 231
YG + + AAY TG
Sbjct: 70 YGYEGSTASTPAAYLTG 86
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +3
Query: 360 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 467
LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 54.0 bits (124), Expect = 3e-06
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHEL-P 177
GKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD ++ AA+S EL
Sbjct: 17 GKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRELIK 69
Query: 178 RYGVKVGLTNYAAAYSTG 231
++G K N AAY TG
Sbjct: 70 KFGWKGDGNNTCAAYLTG 87
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +3
Query: 342 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 470
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG 140
Score = 35.1 bits (77), Expect = 1.6
Identities = 12/51 (23%), Positives = 31/51 (60%)
Frame = +2
Query: 530 HVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSH 682
H+A++ +L++++ + ++RQFS+Y+ G+ + + ++ +AI H
Sbjct: 148 HIAQWAEALKEENAELYQRQFSRYLDRGLNPEELPGHVEEVKKAIEEAYKH 198
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPK 69
GKTDYYARKRL +QDKN+YNTP+
Sbjct: 45 GKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 342 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 467
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/76 (35%), Positives = 39/76 (51%)
Frame = +1
Query: 4 KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRY 183
+TDY+ R RL+ + K RL+ R SNK V Q+ GD + +A+S +L Y
Sbjct: 18 RTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEY 70
Query: 184 GVKVGLTNYAAAYSTG 231
G + N +AY TG
Sbjct: 71 GWEAPTGNMPSAYLTG 86
Score = 41.5 bits (93), Expect = 0.019
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 342 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 452
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 41.5 bits (93), Expect = 0.019
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
G+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD +A S EL +
Sbjct: 17 GRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDITYSSAVSSELAK 69
Query: 181 YGVKVGLTNYAAAYSTG 231
YG N AAY TG
Sbjct: 70 YGYTGATGNTTAAYLTG 86
Score = 41.1 bits (92), Expect = 0.025
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 360 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 467
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 37.1 bits (82), Expect = 0.41
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 360 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 467
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
Score = 35.9 bits (79), Expect = 0.94
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKT+Y R +LV DK R++VR+++ Q+ GD + +A S L
Sbjct: 17 GKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETLVSATSKNLKE 69
Query: 181 YGVKVGLTNYAAAYSTG 231
+G N +AAY TG
Sbjct: 70 FGWLGNGKNTSAAYLTG 86
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 35.5 bits (78), Expect = 1.2
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAAYSHELP 177
G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+ L
Sbjct: 12 GITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTVTDKTLA 63
Query: 178 RYGVKVGLTNYAAAYSTG 231
+YGV + N Y G
Sbjct: 64 KYGVDLRGNNIQVCYLVG 81
Score = 33.9 bits (74), Expect = 3.8
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 342 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 467
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,484,151
Number of Sequences: 1657284
Number of extensions: 12992257
Number of successful extensions: 33223
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 31915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33213
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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