Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00995
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 150 5e-36
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 150 5e-36
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 150 5e-36
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 150 5e-36
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 150 5e-36
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 150 5e-36
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 148 2e-35
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 143 6e-34
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 96 1e-19
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 80 6e-15
AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5 pr... 30 6.8
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 150 bits (363), Expect = 5e-36
Identities = 64/77 (83%), Positives = 74/77 (96%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 26 GKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPK 85
Query: 181 YGVKVGLTNYAAAYSTG 231
YGVKVGLTNYAAAY TG
Sbjct: 86 YGVKVGLTNYAAAYCTG 102
Score = 120 bits (289), Expect = 5e-27
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 489 KFNAEV 506
+FNAEV
Sbjct: 189 EFNAEV 194
Score = 77.8 bits (183), Expect = 3e-14
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R HI G +VA+YMR L ++DED++K+QFS+YI+ VT D +E +YKKAH AIR +P ++K
Sbjct: 196 RKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEK 255
Query: 689 K 691
K
Sbjct: 256 K 256
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 150 bits (363), Expect = 5e-36
Identities = 64/77 (83%), Positives = 74/77 (96%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 26 GKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPK 85
Query: 181 YGVKVGLTNYAAAYSTG 231
YGVKVGLTNYAAAY TG
Sbjct: 86 YGVKVGLTNYAAAYCTG 102
Score = 120 bits (289), Expect = 5e-27
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 489 KFNAEV 506
+FNAEV
Sbjct: 189 EFNAEV 194
Score = 77.8 bits (183), Expect = 3e-14
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R HI G +VA+YMR L ++DED++K+QFS+YI+ VT D +E +YKKAH AIR +P ++K
Sbjct: 196 RKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEK 255
Query: 689 K 691
K
Sbjct: 256 K 256
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 150 bits (363), Expect = 5e-36
Identities = 64/77 (83%), Positives = 74/77 (96%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 26 GKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPK 85
Query: 181 YGVKVGLTNYAAAYSTG 231
YGVKVGLTNYAAAY TG
Sbjct: 86 YGVKVGLTNYAAAYCTG 102
Score = 120 bits (289), Expect = 5e-27
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 489 KFNAEV 506
+FNAEV
Sbjct: 189 EFNAEV 194
Score = 78.2 bits (184), Expect = 3e-14
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R HI G +VA+YMR L ++DED++K+QFS+YI+ VT D +E +YKKAH AIR +P ++K
Sbjct: 196 RKHIMGQNVADYMRCLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEK 255
Query: 689 K 691
K
Sbjct: 256 K 256
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 150 bits (363), Expect = 5e-36
Identities = 64/77 (83%), Positives = 74/77 (96%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 26 GKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPK 85
Query: 181 YGVKVGLTNYAAAYSTG 231
YGVKVGLTNYAAAY TG
Sbjct: 86 YGVKVGLTNYAAAYCTG 102
Score = 120 bits (289), Expect = 5e-27
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 489 KFNAEV 506
+FNAEV
Sbjct: 189 EFNAEV 194
Score = 77.8 bits (183), Expect = 3e-14
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R HI G +VA+YMR L ++DED++K+QFS+YI+ VT D +E +YKKAH AIR +P ++K
Sbjct: 196 RKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEK 255
Query: 689 K 691
K
Sbjct: 256 K 256
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 150 bits (363), Expect = 5e-36
Identities = 64/77 (83%), Positives = 74/77 (96%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 26 GKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPK 85
Query: 181 YGVKVGLTNYAAAYSTG 231
YGVKVGLTNYAAAY TG
Sbjct: 86 YGVKVGLTNYAAAYCTG 102
Score = 120 bits (289), Expect = 5e-27
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 489 KFNAEV 506
+FNAEV
Sbjct: 189 EFNAEV 194
Score = 77.8 bits (183), Expect = 3e-14
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R HI G +VA+YMR L ++DED++K+QFS+YI+ VT D +E +YKKAH AIR +P ++K
Sbjct: 196 RKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEK 255
Query: 689 K 691
K
Sbjct: 256 K 256
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 150 bits (363), Expect = 5e-36
Identities = 64/77 (83%), Positives = 74/77 (96%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 33 GKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPK 92
Query: 181 YGVKVGLTNYAAAYSTG 231
YGVKVGLTNYAAAY TG
Sbjct: 93 YGVKVGLTNYAAAYCTG 109
Score = 120 bits (289), Expect = 5e-27
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK
Sbjct: 136 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 195
Query: 489 KFNAEV 506
+FNAEV
Sbjct: 196 EFNAEV 201
Score = 73.7 bits (173), Expect = 6e-13
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R HI G +VA+YMR L ++DED++K+QFS+YI+ VT D +E +YKKAH AIR +P ++K
Sbjct: 203 RKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPD-MEEMYKKAHAAIRENPVYEK 261
Query: 689 K 691
K
Sbjct: 262 K 262
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 148 bits (358), Expect = 2e-35
Identities = 63/77 (81%), Positives = 73/77 (94%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+
Sbjct: 26 GKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPK 85
Query: 181 YGVKVGLTNYAAAYSTG 231
YGVKVGLTNYAAAY TG
Sbjct: 86 YGVKVGLTNYAAAYCTG 102
Score = 120 bits (289), Expect = 5e-27
Identities = 52/66 (78%), Positives = 59/66 (89%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 488
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK
Sbjct: 129 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESK 188
Query: 489 KFNAEV 506
+FNAEV
Sbjct: 189 EFNAEV 194
Score = 77.8 bits (183), Expect = 3e-14
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R HI G +VA+YMR L ++DED++K+QFS+YI+ VT D +E +YKKAH AIR +P ++K
Sbjct: 196 RKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEK 255
Query: 689 K 691
K
Sbjct: 256 K 256
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 143 bits (346), Expect = 6e-34
Identities = 61/73 (83%), Positives = 71/73 (97%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+
Sbjct: 26 GKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPK 85
Query: 181 YGVKVGLTNYAAA 219
YGVKVGLTNYAAA
Sbjct: 86 YGVKVGLTNYAAA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 95.9 bits (228), Expect = 1e-19
Identities = 40/52 (76%), Positives = 49/52 (94%)
Frame = +1
Query: 76 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 231
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTG 52
Score = 85.8 bits (203), Expect = 1e-16
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +3
Query: 309 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 449
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PH
Sbjct: 79 EYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 80.2 bits (189), Expect = 6e-15
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = +3
Query: 381 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEV 506
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEV
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEV 42
Score = 77.8 bits (183), Expect = 3e-14
Identities = 34/61 (55%), Positives = 48/61 (78%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R HI G +VA+YMR L ++DED++K+QFS+YI+ VT D +E +YKKAH AIR +P ++K
Sbjct: 44 RKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEK 103
Query: 689 K 691
K
Sbjct: 104 K 104
>AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5
protein.
Length = 62
Score = 30.3 bits (65), Expect = 6.8
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 629 IEAIYKKAHEAIRADPSHKKK 691
+E +YKKAH AIR +P ++KK
Sbjct: 1 MEEMYKKAHAAIRENPVYEKK 21
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,673,767
Number of Sequences: 237096
Number of extensions: 2103620
Number of successful extensions: 3772
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3770
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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