Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00995
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 144 7e-35
AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical ... 32 0.34
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 30 1.8
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z81484-7|CAE11296.1| 221|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 7.3
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 144 bits (348), Expect = 7e-35
Identities = 64/77 (83%), Positives = 72/77 (93%)
Frame = +1
Query: 1 GKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPR 180
GKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV Q+AYS+IEGD +V +AYSHELPR
Sbjct: 26 GKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKIEGDVVVASAYSHELPR 85
Query: 181 YGVKVGLTNYAAAYSTG 231
YG+KVGLTNYAAAY+TG
Sbjct: 86 YGLKVGLTNYAAAYATG 102
Score = 83.8 bits (198), Expect = 1e-16
Identities = 39/66 (59%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Frame = +3
Query: 309 EYNVEPV-DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAES 485
+YNVE D P F+ LD+GLARTTTG+++F MKG DGG+NVPHS RF G+D ES
Sbjct: 129 DYNVEEEGDRAP--FKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQES 186
Query: 486 KKFNAE 503
K++NAE
Sbjct: 187 KEYNAE 192
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/61 (52%), Positives = 42/61 (68%)
Frame = +2
Query: 509 RAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIQLGVTADAIEAIYKKAHEAIRADPSHKK 688
R I G HVA+YM L+++DED +KRQFSK++ G+ AD + A Y+K H AIRAD S
Sbjct: 195 RDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPAA 254
Query: 689 K 691
K
Sbjct: 255 K 255
>AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical
protein F41A4.1 protein.
Length = 696
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 315 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 491
N EP++ G F C+L TT+G+R G + L + ++FPG +
Sbjct: 68 NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127
Query: 492 FNAEVQGLTSLVCM 533
F + ++ C+
Sbjct: 128 FIIKTFSISMEECL 141
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 160 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 47
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 160 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 47
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 55 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 174
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>Z81484-7|CAE11296.1| 221|Caenorhabditis elegans Hypothetical
protein C47A10.7 protein.
Length = 221
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/28 (35%), Positives = 22/28 (78%)
Frame = +3
Query: 492 FNAEVQGLTSLVCMLLNT*EVLNRMMRI 575
F+A+VQG T+L+C++++ VL+ ++ +
Sbjct: 162 FSADVQGTTNLICIIVSMHGVLSTLVMV 189
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 202 SDQPSHHNVATHVNKQRTQYGHLQSESRP 116
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 202 SDQPSHHNVATHVNKQRTQYGHLQSESRP 116
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 202 SDQPSHHNVATHVNKQRTQYGHLQSESRP 116
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,991,488
Number of Sequences: 27780
Number of extensions: 329041
Number of successful extensions: 821
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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