Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00994
(703 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113438-1|AAM29443.1| 248|Drosophila melanogaster RE27758p pro... 63 4e-10
AY060877-1|AAL28425.1| 248|Drosophila melanogaster GM04029p pro... 63 4e-10
AE014134-59|AAF51533.1| 248|Drosophila melanogaster CG11488-PA ... 63 4e-10
AY075391-1|AAL68225.1| 565|Drosophila melanogaster LD26265p pro... 29 8.1
AY075196-1|AAL68065.1| 608|Drosophila melanogaster AT13609p pro... 29 8.1
AE014134-1621|AAF52762.1| 602|Drosophila melanogaster CG17005-P... 29 8.1
>AY113438-1|AAM29443.1| 248|Drosophila melanogaster RE27758p
protein.
Length = 248
Score = 62.9 bits (146), Expect = 4e-10
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +1
Query: 505 LNKNKMYLRTYGKKIVSLATKGTRYEVVNELFTSHPNIIFG-QPENAAKMFKILKKAPQL 681
L+K ++L++YG KI+ A K TRYE + LF S+ I+F PE A + +I+++ PQ+
Sbjct: 114 LHKQNLHLKSYGSKIIEQAVKNTRYEAIVPLFHSNHCIVFSPDPEKTAALLRIVRRVPQM 173
Query: 682 VVMAGVV 702
V++ G+V
Sbjct: 174 VLLGGIV 180
Score = 52.4 bits (120), Expect = 6e-07
Identities = 23/78 (29%), Positives = 45/78 (57%)
Frame = +2
Query: 251 KARLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWF 430
+ + PH+ER ++ +++PKY P+ R E+ + + +NP+ I+ARE W
Sbjct: 32 RPKAPHYERARVVAVTQPKY--PELPKAKSCFKTRAERTQQQQ-ENPYNEIIAREVRNWL 88
Query: 431 NTSKMIVFLHVNPITMED 484
+ S+++ F H++ IT +D
Sbjct: 89 DHSRLVAFFHLSSITADD 106
>AY060877-1|AAL28425.1| 248|Drosophila melanogaster GM04029p
protein.
Length = 248
Score = 62.9 bits (146), Expect = 4e-10
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +1
Query: 505 LNKNKMYLRTYGKKIVSLATKGTRYEVVNELFTSHPNIIFG-QPENAAKMFKILKKAPQL 681
L+K ++L++YG KI+ A K TRYE + LF S+ I+F PE A + +I+++ PQ+
Sbjct: 114 LHKQNLHLKSYGSKIIEQAVKNTRYEAIVPLFHSNHCIVFSPDPEKTAALLRIVRRVPQM 173
Query: 682 VVMAGVV 702
V++ G+V
Sbjct: 174 VLLGGIV 180
Score = 52.4 bits (120), Expect = 6e-07
Identities = 23/78 (29%), Positives = 45/78 (57%)
Frame = +2
Query: 251 KARLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWF 430
+ + PH+ER ++ +++PKY P+ R E+ + + +NP+ I+ARE W
Sbjct: 32 RPKAPHYERARVVAVTQPKY--PELPKAKSCFKTRAERTQQQQ-ENPYNEIIAREVRNWL 88
Query: 431 NTSKMIVFLHVNPITMED 484
+ S+++ F H++ IT +D
Sbjct: 89 DHSRLVAFFHLSSITADD 106
>AE014134-59|AAF51533.1| 248|Drosophila melanogaster CG11488-PA
protein.
Length = 248
Score = 62.9 bits (146), Expect = 4e-10
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Frame = +1
Query: 505 LNKNKMYLRTYGKKIVSLATKGTRYEVVNELFTSHPNIIFG-QPENAAKMFKILKKAPQL 681
L+K ++L++YG KI+ A K TRYE + LF S+ I+F PE A + +I+++ PQ+
Sbjct: 114 LHKQNLHLKSYGSKIIEQAVKNTRYEAIVPLFHSNHCIVFSPDPEKTAALLRIVRRVPQM 173
Query: 682 VVMAGVV 702
V++ G+V
Sbjct: 174 VLLGGIV 180
Score = 52.4 bits (120), Expect = 6e-07
Identities = 23/78 (29%), Positives = 45/78 (57%)
Frame = +2
Query: 251 KARLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWF 430
+ + PH+ER ++ +++PKY P+ R E+ + + +NP+ I+ARE W
Sbjct: 32 RPKAPHYERARVVAVTQPKY--PELPKAKSCFKTRAERTQQQQ-ENPYNEIIAREVRNWL 88
Query: 431 NTSKMIVFLHVNPITMED 484
+ S+++ F H++ IT +D
Sbjct: 89 DHSRLVAFFHLSSITADD 106
>AY075391-1|AAL68225.1| 565|Drosophila melanogaster LD26265p
protein.
Length = 565
Score = 28.7 bits (61), Expect = 8.1
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 152 TTKTENVIIKKNSFRASSMFSHSKEVSRENKYSKARLPHFERQLLLDLSKPKYGPPKYT- 328
TT+T+ I+ NSF ++ M + K+ Y KA+L L DL +
Sbjct: 253 TTRTKLASIEDNSFGSNDMVADLKKQLESELYEKAKLQEQVGSLERDLDNAAEAGLELNK 312
Query: 329 -LPDFLLCDRGEKKNKTEIDNPFER 400
L + L GE+ +K +++ ++
Sbjct: 313 MLSEVLNGQNGEEAHKQRLESQLQQ 337
>AY075196-1|AAL68065.1| 608|Drosophila melanogaster AT13609p
protein.
Length = 608
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 279 SYYLIYQNLNMVRPSTHYPTFYFATEER--KRIKQKLTIPSKGFWP 410
S+Y I Q L + + + +F FA+ +R K + LT+P + WP
Sbjct: 204 SFYHITQPLWVQNITMSHLSFSFASRDRGLKLLNMNLTVPRQSVWP 249
>AE014134-1621|AAF52762.1| 602|Drosophila melanogaster CG17005-PA
protein.
Length = 602
Score = 28.7 bits (61), Expect = 8.1
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 279 SYYLIYQNLNMVRPSTHYPTFYFATEER--KRIKQKLTIPSKGFWP 410
S+Y I Q L + + + +F FA+ +R K + LT+P + WP
Sbjct: 204 SFYHITQPLWVQNITMSHLSFSFASRDRGLKLLNMNLTVPRQSVWP 249
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,162,786
Number of Sequences: 53049
Number of extensions: 653789
Number of successful extensions: 1616
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1610
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -