Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00994
(703 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g60890.1 68416.m06812 hypothetical protein 30 1.3
At5g62240.1 68418.m07815 expressed protein various predicted pro... 29 3.0
At3g42530.1 68416.m04410 Ulp1 protease family similar to At5g281... 29 3.9
At1g28110.2 68414.m03444 serine carboxypeptidase S10 family prot... 29 3.9
At1g28110.1 68414.m03443 serine carboxypeptidase S10 family prot... 29 3.9
At1g22360.1 68414.m02797 UDP-glucoronosyl/UDP-glucosyl transfera... 29 3.9
At4g24400.1 68417.m03499 CBL-interacting protein kinase 8 (CIPK8... 28 6.9
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 28 6.9
At5g53520.1 68418.m06651 oligopeptide transporter OPT family pro... 27 9.1
At5g40590.1 68418.m04926 DC1 domain-containing protein predicted... 27 9.1
At2g10350.1 68415.m01087 Ulp1 protease family protein similar to... 27 9.1
At1g70340.1 68414.m08092 expressed protein 27 9.1
At1g65930.1 68414.m07481 isocitrate dehydrogenase, putative / NA... 27 9.1
At1g44880.1 68414.m05142 Ulp1 protease family protein similar to... 27 9.1
>At3g60890.1 68416.m06812 hypothetical protein
Length = 105
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 179 KKNSFRASSMFSHSKEVSRENKY--SKARLPHFERQLLLDLSKPKYGPPKYTL 331
K+ R +F ++ + REN+ KA L H E L L PKY P +L
Sbjct: 51 KEMEMRNLKLFVENQSIIRENEALKKKALLLHHENNALFALLHPKYSPVSTSL 103
>At5g62240.1 68418.m07815 expressed protein various predicted
proteins, Arabidopsis thaliana; expression supported by
MPSS
Length = 366
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +3
Query: 84 FNKHVTLVFRTIIL*YNINPHLQPLKL-RMSSLKKILLEPRACLVTAKR---FRGKINIQ 251
F ++V V + + + N Q K+ +SS K+ + L TA+R R K+N Q
Sbjct: 164 FGENVAPVLVSKLQNQDTNRQKQEAKVAHVSSRAKLTVPKEPNLRTAERSERHRSKVNTQ 223
Query: 252 RQGCLISNGSYYLIYQNLNMVRPST 326
R+ SN ++ +N+N+ ST
Sbjct: 224 REQIATSNSKRHIRNKNINLEPVST 248
>At3g42530.1 68416.m04410 Ulp1 protease family similar to At5g28170,
At1g35110, At1g44880, At4g19320, At5g36020, At4g03970,
At3g43010, At2g10350; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 889
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 235 PRNLFAVTKHARGSKRIFFNDDILSF 158
P LFA+ ++ RG I+ DILSF
Sbjct: 18 PNRLFAIDQYPRGRLNIYSRPDILSF 43
>At1g28110.2 68414.m03444 serine carboxypeptidase S10 family protein
similar to H.vulgare gene encoding serine
carboxypeptidase II, CP-MII GI:1731989
Length = 461
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 514 NKMYLRTYGKKIVSLATKGTRYEVVNELFTSHPNIIFGQ 630
N +YL T S +T+ + YE VN+ T+ N++F Q
Sbjct: 119 NMLYLETPVGVGFSYSTQSSHYEGVNDKITARDNLVFLQ 157
>At1g28110.1 68414.m03443 serine carboxypeptidase S10 family protein
similar to H.vulgare gene encoding serine
carboxypeptidase II, CP-MII GI:1731989
Length = 461
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 514 NKMYLRTYGKKIVSLATKGTRYEVVNELFTSHPNIIFGQ 630
N +YL T S +T+ + YE VN+ T+ N++F Q
Sbjct: 119 NMLYLETPVGVGFSYSTQSSHYEGVNDKITARDNLVFLQ 157
>At1g22360.1 68414.m02797 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 481
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +2
Query: 314 PPKYTLPDFLLCDRGEKKNKTEIDNPFERILARE--CLEWFNTS--KMIVFLHVNPITM 478
PP Y++ L ++ E +EI + E CL+W NT +V+++ IT+
Sbjct: 248 PPVYSIGPLHLLEKQESGEYSEIGRTGSNLWREETECLDWLNTKARNSVVYVNFGSITV 306
>At4g24400.1 68417.m03499 CBL-interacting protein kinase 8 (CIPK8)
identical to CBL-interacting protein kinase 8
[Arabidopsis thaliana] GP|13249115|gb|AAK16683; contains
Pfam profiles PF00069: Protein kinase domain and
PF03822: NAF domain
Length = 445
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 517 KMYLRTYGKKIVSL-ATKGTRYEVVNELFTSHPNIIFGQPENAA 645
K ++R Y ++ L A K + + V+ E+F P+I+ +NAA
Sbjct: 361 KTHIRNYKMRVEGLSANKTSHFSVILEVFKVAPSILMVDIQNAA 404
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 235 PRNLFAVTKHARGSKRIFFNDDILSF 158
P LFA ++ RG I+ DILSF
Sbjct: 18 PNRLFATDQYPRGKLNIYSRPDILSF 43
>At5g53520.1 68418.m06651 oligopeptide transporter OPT family
protein similar to SP|P40900 Sexual differentiation
process protein isp4 {Schizosaccharomyces pombe},
oligopeptide transporter Opt1p [Candida albicans]
GI:2367386; contains Pfam profile PF03169: OPT
oligopeptide transporter protein
Length = 733
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/31 (35%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 4 RYVMGNWKKIEINS-IIYSNFKNIPVWYLIS 93
R G KK++I++ I+ N+K +P+W+ +S
Sbjct: 388 RGAFGKNKKMDIHTKIMKRNYKEVPLWWFLS 418
>At5g40590.1 68418.m04926 DC1 domain-containing protein predicted
protein, Arabidopsis thaliana
Length = 234
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 531 NLWKKNCKPCDKRNTLRSCQ 590
NLW CK CD L SC+
Sbjct: 154 NLWSYYCKECDYATHLHSCK 173
>At2g10350.1 68415.m01087 Ulp1 protease family protein similar to
At5g28170, At1g35110, At1g44880, At3g42530, At4g19320,
At5g36020, At4g03970, At3g43010 ; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1110
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 235 PRNLFAVTKHARGSKRIFFNDDILSF 158
P LFA ++ RG I+ DILSF
Sbjct: 18 PNRLFATDQYPRGRLNIYSRPDILSF 43
>At1g70340.1 68414.m08092 expressed protein
Length = 510
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 344 LCDRGEKKNKTEIDNPFERIL-ARECLEWFNTSKMI 448
+CDR KKN + +PF+ L A+E + +TSK I
Sbjct: 223 VCDRQAKKNNASLFSPFKSSLEAQEDVVPLSTSKKI 258
>At1g65930.1 68414.m07481 isocitrate dehydrogenase, putative / NADP+
isocitrate dehydrogenase, putative strong similarity to
isocitrate dehydrogenase SP|Q40345 from [Medicago
sativa]
Length = 410
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 161 TENVIIKKNSFRASSMFSHSKEVSRENKYSKARLPHFERQLLLDL 295
T+N I+KK R +F E S ++KY A + +E +L+ D+
Sbjct: 211 TKNTILKKYDGRFKDIFQEVYEASWKSKYDAAGI-WYEHRLIDDM 254
>At1g44880.1 68414.m05142 Ulp1 protease family protein similar to
At5g28170, At1g35110, At3g42530, At4g19320, At5g36020,
At4g03970, At3g43010, At2g10350; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1038
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 235 PRNLFAVTKHARGSKRIFFNDDILSF 158
P LFA ++ RG I+ DILSF
Sbjct: 18 PNRLFATDQYPRGRLNIYSRPDILSF 43
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,453,426
Number of Sequences: 28952
Number of extensions: 324956
Number of successful extensions: 918
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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