Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00993
(652 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16VU4 Cluster: Mitochondrial ribosomal protein, L10, p... 75 1e-12
UniRef50_Q56FJ7 Cluster: Mitochondrial ribosomal protein L10; n=... 69 7e-11
UniRef50_UPI00015B5309 Cluster: PREDICTED: similar to ENSANGP000... 61 2e-08
UniRef50_UPI0000D56178 Cluster: PREDICTED: similar to CG11488-PA... 57 4e-07
UniRef50_Q9VPL3 Cluster: 39S ribosomal protein L10, mitochondria... 53 7e-06
UniRef50_UPI0000DB7731 Cluster: PREDICTED: similar to Amyotrophi... 48 1e-04
UniRef50_Q7RFR6 Cluster: Putative uncharacterized protein PY0463... 34 3.4
UniRef50_Q6C3Q8 Cluster: Similar to DYHC_FUSSO sp|P78716 Fusariu... 34 3.4
UniRef50_Q64QD3 Cluster: Putative ABC-transporter permease prote... 33 4.5
UniRef50_Q5CVR1 Cluster: 12x WD40 repeat containing protein; n=2... 33 4.5
UniRef50_A0DT30 Cluster: Chromosome undetermined scaffold_62, wh... 33 5.9
UniRef50_Q18Z47 Cluster: HpcH/HpaI aldolase precursor; n=2; Desu... 33 7.8
UniRef50_Q4YQU3 Cluster: CCAAT-box DNA binding protein subunit B... 33 7.8
>UniRef50_Q16VU4 Cluster: Mitochondrial ribosomal protein, L10,
putative; n=2; Culicidae|Rep: Mitochondrial ribosomal
protein, L10, putative - Aedes aegypti (Yellowfever
mosquito)
Length = 256
Score = 74.9 bits (176), Expect = 1e-12
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +2
Query: 251 KARLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEK-KNKTEIDNPFERILARECLEW 427
+ R PH+ER +LDL KP Y ++ P C+ E+ K E+DNP+ERI+ARE W
Sbjct: 30 RPRQPHYERARVLDLVKPVYKQLEFNAP----CEDVERSKVAQEVDNPYERIIAREVRNW 85
Query: 428 VNTSKMIVFLHVNPITMEDKTPVYAALIR 514
++ SKM+ F+H+N I ED V AL R
Sbjct: 86 LDHSKMVAFIHLNSIKQEDFFKVQVALHR 114
Score = 40.3 bits (90), Expect = 0.039
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +3
Query: 177 LKKILLEPRACLVTAKRFRGKINIQRQGCLISNGSYYLIYQNLNMVRPSTHYPTFYFATE 356
++K LL+ R LV KRFRGKINIQR +Y + L++V+P F E
Sbjct: 5 VQKTLLQSRLPLVCFKRFRGKINIQR-----PRQPHYERARVLDLVKPVYKQLEFNAPCE 59
Query: 357 --ERKRIKQKLTIPSKGFWPENVWNGLIHPK 443
ER ++ Q++ P + V N L H K
Sbjct: 60 DVERSKVAQEVDNPYERIIAREVRNWLDHSK 90
Score = 35.9 bits (79), Expect = 0.84
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +1
Query: 505 LNKNKMYLRTYGKKIVSLATKGTRYEVVNELFTSHXNIIF 624
L++++M ++ YGK ++ A +GT++E + LF +IF
Sbjct: 112 LHRHQMNVKVYGKSVIRQAVEGTKFETIQPLFDVKTALIF 151
>UniRef50_Q56FJ7 Cluster: Mitochondrial ribosomal protein L10; n=1;
Lysiphlebus testaceipes|Rep: Mitochondrial ribosomal
protein L10 - Lysiphlebus testaceipes (Greenbugs aphid
parastoid)
Length = 173
Score = 69.3 bits (162), Expect = 7e-11
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Frame = +2
Query: 251 KARLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRG-EKKNKTEID---NPFERILAREC 418
K R+PHF+R+ + + P Y PP+ LP LC EKK K E+ N ++ I+ R+
Sbjct: 31 KPRIPHFKRRCMEEFVTPYYDPPRPILPVHELCGNIIEKKKKLEMSESVNQYQIIIGRDV 90
Query: 419 LEWVNTSKMIVFLHVNPITMEDK 487
L W N SKMI FLH N I ED+
Sbjct: 91 LNWFNNSKMIAFLHKNSIKTEDE 113
Score = 38.7 bits (86), Expect = 0.12
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 505 LNKNKMYLRTYGKKIVSLATKGTRYEVVNELFTSHXNIIF 624
L + MYL+ YG K + KGT+YE V +L+ + NI+F
Sbjct: 120 LRRENMYLKYYGYKTMEAGLKGTKYENVLQLWGAPGNIVF 159
>UniRef50_UPI00015B5309 Cluster: PREDICTED: similar to
ENSANGP00000012431; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000012431 - Nasonia
vitripennis
Length = 253
Score = 61.3 bits (142), Expect = 2e-08
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Frame = +2
Query: 203 SMFSHSKEVSRENKYSKARLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKK--NKT 376
S+F+ K + + R PH ER +L P P P C R + KT
Sbjct: 14 SVFTQQKRFRGKINIQRPRPPHHERGKVLKFITPFISNPDTQKPLKERCKRISQTVMQKT 73
Query: 377 EIDNPFERILARECLEWVNTSKMIVFLHVNPITMEDKTPVYAALIRIKCI*EPMEKKL-- 550
+ NP++ I+ARECL W TS+M+ LH N I E + L R + + +
Sbjct: 74 KPINPYDVIIARECLNWFKTSRMVAILHANSIKSEQQFEYAVPLKRANMYFKGYQPSILN 133
Query: 551 *ALRQKEHATKLSMNCLPHIXILYSV 628
AL+ + L + CLP + + Y V
Sbjct: 134 LALKDSNYEAVLKL-CLPTMPVSYFV 158
>UniRef50_UPI0000D56178 Cluster: PREDICTED: similar to CG11488-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG11488-PA - Tribolium castaneum
Length = 240
Score = 56.8 bits (131), Expect = 4e-07
Identities = 29/111 (26%), Positives = 53/111 (47%)
Frame = +2
Query: 170 VIIKKNSFRASSMFSHSKEVSRENKYSKARLPHFERQLLLDLSKPKYGPPKYTLPDFLLC 349
+I + F S +K + + + H ER +++ L+ P + K LC
Sbjct: 3 LIARGGLFERLSPLVQAKRFRGKINIQRPKPVHRERSIMMTLTNPFFISTKKGKTPIDLC 62
Query: 350 DRGEKKNKTEIDNPFERILARECLEWVNTSKMIVFLHVNPITMEDKTPVYA 502
+ + K + NP+++I+A E W NTS++I F H+NP+ + + YA
Sbjct: 63 TKSQDKIVKDEHNPYQQIIAGELRMWFNTSRLIAFYHLNPMKSDQRFKAYA 113
>UniRef50_Q9VPL3 Cluster: 39S ribosomal protein L10, mitochondrial
precursor; n=2; Sophophora|Rep: 39S ribosomal protein
L10, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 248
Score = 52.8 bits (121), Expect = 7e-06
Identities = 23/78 (29%), Positives = 46/78 (58%)
Frame = +2
Query: 251 KARLPHFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWV 430
+ + PH+ER ++ +++PKY P+ R E+ + + +NP+ I+ARE W+
Sbjct: 32 RPKAPHYERARVVAVTQPKY--PELPKAKSCFKTRAERTQQQQ-ENPYNEIIAREVRNWL 88
Query: 431 NTSKMIVFLHVNPITMED 484
+ S+++ F H++ IT +D
Sbjct: 89 DHSRLVAFFHLSSITADD 106
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +1
Query: 505 LNKNKMYLRTYGKKIVSLATKGTRYEVVNELFTSHXNIIF 624
L+K ++L++YG KI+ A K TRYE + LF S+ I+F
Sbjct: 114 LHKQNLHLKSYGSKIIEQAVKNTRYEAIVPLFHSNHCIVF 153
>UniRef50_UPI0000DB7731 Cluster: PREDICTED: similar to Amyotrophic
lateral sclerosis 2 chromosome region candidate gene 19
protein (Partitioning-defective 3-like protein) (PAR3-L
protein) (PAR3-beta); n=1; Apis mellifera|Rep: PREDICTED:
similar to Amyotrophic lateral sclerosis 2 chromosome
region candidate gene 19 protein (Partitioning-defective
3-like protein) (PAR3-L protein) (PAR3-beta) - Apis
mellifera
Length = 1101
Score = 48.4 bits (110), Expect = 1e-04
Identities = 28/83 (33%), Positives = 42/83 (50%)
Frame = +2
Query: 266 HFERQLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWVNTSKM 445
+F++++L +L P + P LC+ + K P++ I+ARE W + SKM
Sbjct: 920 YFKKRVLNELLTPFFINPNKDKTLEQLCENTKTKEFENRLGPYDTIIAREVRNWFDNSKM 979
Query: 446 IVFLHVNPITMEDKTPVYAALIR 514
IV LHVN I D V AL +
Sbjct: 980 IVILHVNSIMELDVFDVKVALFK 1002
>UniRef50_Q7RFR6 Cluster: Putative uncharacterized protein PY04637;
n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04637 - Plasmodium yoelii yoelii
Length = 369
Score = 33.9 bits (74), Expect = 3.4
Identities = 32/123 (26%), Positives = 59/123 (47%)
Frame = +2
Query: 98 NARV*NNYPLIQYQPTSTTTKTENVIIKKNSFRASSMFSHSKEVSRENKYSKARLPHFER 277
NA+V + P++Q STT +NV +K N+ K + + KY R + +
Sbjct: 100 NAKV--DPPILQLP--STTNLIKNVHVKANN---------EKNIDKAYKY---RDQNSNK 143
Query: 278 QLLLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEIDNPFERILARECLEWVNTSKMIVFL 457
++ ++ KP Y P+Y + ++ + +KK I N + L + E+ N+ K +V
Sbjct: 144 DIIRNM-KPLYSIPEYVMNSYMYDNDMDKKGNENIPNDESKCLFQN--EYHNSEKKLVET 200
Query: 458 HVN 466
H+N
Sbjct: 201 HIN 203
>UniRef50_Q6C3Q8 Cluster: Similar to DYHC_FUSSO sp|P78716 Fusarium
solani Dynein heavy chain; n=1; Yarrowia lipolytica|Rep:
Similar to DYHC_FUSSO sp|P78716 Fusarium solani Dynein
heavy chain - Yarrowia lipolytica (Candida lipolytica)
Length = 3982
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/94 (22%), Positives = 42/94 (44%)
Frame = +2
Query: 350 DRGEKKNKTEIDNPFERILARECLEWVNTSKMIVFLHVNPITMEDKTPVYAALIRIKCI* 529
D K N D P + +++ + L+ + TS + VF HVN PV+ L + C+
Sbjct: 200 DMVSKYNVLLRDFPLDELMSADSLDTLTTSLVSVFNHVNKKFRLSTYPVWRCLALVGCVS 259
Query: 530 EPMEKKL*ALRQKEHATKLSMNCLPHIXILYSVN 631
+K++ + + + + + ++ SVN
Sbjct: 260 GDFDKQIKVILSRLELSLMQLPSTEFNQVIDSVN 293
>UniRef50_Q64QD3 Cluster: Putative ABC-transporter permease protein;
n=2; Bacteroides fragilis|Rep: Putative ABC-transporter
permease protein - Bacteroides fragilis
Length = 770
Score = 33.5 bits (73), Expect = 4.5
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Frame = +2
Query: 197 ASSMFSHSKEVSRENKYSKAR--LPHFER----QLLLDLSKPKYGPPKYTLPDFLLCDRG 358
ASS +S+ KE++ +K + L F+ + + KYG + T PD ++ R
Sbjct: 94 ASSSYSNGKEITAIDKKQRELPFLVSFQNVSSNYFTYNSLQLKYGNQEITAPDEVIVSRS 153
Query: 359 EKKNKTEIDNPFERILARECLEWVNTSKMIVFLHVNPITMEDK 487
+ +NP +++ +E E N S ++V+ VN E+K
Sbjct: 154 FARKAFGEENPIGQVIRQE-TEAANPSDLMVYKIVNVALTEEK 195
>UniRef50_Q5CVR1 Cluster: 12x WD40 repeat containing protein; n=2;
Cryptosporidium|Rep: 12x WD40 repeat containing protein
- Cryptosporidium parvum Iowa II
Length = 950
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 164 ENVIIKKNSFRASSMFSHSKEVSRENKYSKARLPHFE-RQLLLDLSKPKYGPPKYTLPDF 340
++VII S ++ ++ E + NKY+K ++ E +Q+ DL P Y P++ D
Sbjct: 777 QDVIIMNTIENTSYIYLNNYEEANNNKYNKTKIDPLESKQIEKDLCGPVYKLPRFKKIDA 836
Query: 341 LLCD 352
C+
Sbjct: 837 FTCN 840
>UniRef50_A0DT30 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_62,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 600
Score = 33.1 bits (72), Expect = 5.9
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 284 LLDLSKPKYGPPKYTLPDFLLCDRGEKKNKTEI 382
++D S P+Y PKYT+ F++C+ +K +K E+
Sbjct: 250 IIDESLPQYKLPKYTIRHFMVCEWMKKADKGEL 282
>UniRef50_Q18Z47 Cluster: HpcH/HpaI aldolase precursor; n=2;
Desulfitobacterium hafniense|Rep: HpcH/HpaI aldolase
precursor - Desulfitobacterium hafniense (strain DCB-2)
Length = 234
Score = 32.7 bits (71), Expect = 7.8
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +2
Query: 332 PDFLLCDRGEKKNKTEIDNPFERILARECLEWVNTSKMIVFLHVNPITMEDKTPVYAALI 511
PD +L D E+ E D+ R L +E L +++ SK V + +NP+ ED ++
Sbjct: 27 PDVVLFDLEERVVPQEKDSA--RHLVKEALSFLDYSKTEVMVRINPLDTEDGQKDMDSIS 84
Query: 512 RIK 520
R+K
Sbjct: 85 RVK 87
>UniRef50_Q4YQU3 Cluster: CCAAT-box DNA binding protein subunit B,
putative; n=5; Plasmodium (Vinckeia)|Rep: CCAAT-box DNA
binding protein subunit B, putative - Plasmodium berghei
Length = 1769
Score = 32.7 bits (71), Expect = 7.8
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Frame = +2
Query: 131 QYQPTSTTTKTENVIIKKNSFRASSMFSHSKEVSR-ENKY--SKARLPHFERQLLLDLSK 301
QY PT + EN KK + + MFS V + E KY SK + D +
Sbjct: 880 QYSPTIELNEKENYPKKKTNIKKKKMFSEEVRVCKDEGKYEGSKKNGKKKKGVAFSDQVE 939
Query: 302 PKYGPPKYTLPDFL-LCDRGEKKNKTEIDNPFERILARECLEWVNTSK 442
+ P KYT D LC KN+ ++++ + +C+ T K
Sbjct: 940 MFFTPEKYTQEDNTNLC-----KNENKLNSILSNEINDDCITKCKTKK 982
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,992,023
Number of Sequences: 1657284
Number of extensions: 13179976
Number of successful extensions: 33937
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 32545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33918
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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