Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00992
(589 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 152 5e-36
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 127 2e-28
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 111 9e-24
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 111 2e-23
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 107 2e-22
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 101 2e-20
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 100 5e-20
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 97 4e-19
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 91 2e-17
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 87 2e-16
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 86 7e-16
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 84 3e-15
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 83 6e-15
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 77 2e-13
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 76 5e-13
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 74 3e-12
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 67 2e-10
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 64 2e-09
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 64 3e-09
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 64 3e-09
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 61 2e-08
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 61 2e-08
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 60 4e-08
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 59 9e-08
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 58 1e-07
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 57 4e-07
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 56 5e-07
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 54 2e-06
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 54 3e-06
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 54 3e-06
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 53 4e-06
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 52 8e-06
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 51 2e-05
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 51 2e-05
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 50 5e-05
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 49 7e-05
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 49 7e-05
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 49 9e-05
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 48 1e-04
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 46 5e-04
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 45 0.001
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 45 0.002
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 44 0.002
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 44 0.002
UniRef50_P44347 Cluster: 50S ribosomal protein L6; n=18; Gammapr... 43 0.006
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 42 0.008
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 42 0.011
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 42 0.014
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 40 0.033
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 40 0.043
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 40 0.057
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 40 0.057
UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast p... 40 0.057
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 39 0.100
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 39 0.100
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 39 0.100
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 38 0.13
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 38 0.17
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 38 0.17
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 38 0.23
UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15; Bacteri... 38 0.23
UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16; Bacteri... 38 0.23
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 37 0.30
UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29; Bacteri... 37 0.30
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 37 0.40
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 0.53
UniRef50_Q4G353 Cluster: Chloroplast 50S ribosomal protein L6; n... 36 0.70
UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular... 35 1.2
UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1; Psychrom... 35 1.6
UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular... 35 1.6
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 35 1.6
UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n... 35 1.6
UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Re... 34 2.1
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 2.1
UniRef50_A5E3C0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.8
UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;... 33 3.7
UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 33 4.9
UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19; Bacteri... 33 4.9
UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1; Lentisph... 33 6.5
UniRef50_A0CCY6 Cluster: Chromosome undetermined scaffold_169, w... 33 6.5
UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6; Mycoplas... 33 6.5
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 32 8.6
UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 32 8.6
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 152 bits (369), Expect = 5e-36
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
YKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTVVNS QKDELI+EGN
Sbjct: 88 YKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGN 147
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
+E VS SAALIQQSTTVKN+DIR
Sbjct: 148 DIESVSGSAALIQQSTTVKNKDIR 171
Score = 121 bits (291), Expect = 1e-26
Identities = 57/83 (68%), Positives = 68/83 (81%)
Frame = +2
Query: 5 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 184
I +NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG+KK
Sbjct: 4 INSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKK 63
Query: 185 ELAAVRTVCSHVENMIKGVTKGF 253
ELAAVRTVCSH+ENMIKGVT GF
Sbjct: 64 ELAAVRTVCSHIENMIKGVTFGF 86
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 504 QKFLDGLYVSEKTTVV 551
+KFLDGLYVSEKTTVV
Sbjct: 171 RKFLDGLYVSEKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 127 bits (307), Expect = 2e-28
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV S QKDELI+EGN
Sbjct: 90 YKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGN 149
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
+E VS+SAALIQQ+TTVKN+DIR
Sbjct: 150 DIELVSNSAALIQQATTVKNKDIR 173
Score = 103 bits (246), Expect = 4e-21
Identities = 45/85 (52%), Positives = 66/85 (77%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGS 178
I++NQ V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW+G+
Sbjct: 4 ILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGN 63
Query: 179 KKELAAVRTVCSHVENMIKGVTKGF 253
+KELA VRT+CSHV+NMIKGVT GF
Sbjct: 64 RKELATVRTICSHVQNMIKGVTLGF 88
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 111 bits (268), Expect = 9e-24
Identities = 50/99 (50%), Positives = 69/99 (69%)
Frame = +2
Query: 5 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 184
+ +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG +K
Sbjct: 4 VESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFGVRK 63
Query: 185 ELAAVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTVS 301
E+AA+RTVCSH++NMIKGVTKGF + P+ V+
Sbjct: 64 EIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVT 102
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 372
YKMR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 88 YKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 111 bits (266), Expect = 2e-23
Identities = 53/84 (63%), Positives = 63/84 (75%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT++ S K KDEL+++GN
Sbjct: 89 YKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGN 148
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
+E VS SAALI Q VKN+DIR
Sbjct: 149 DIELVSRSAALINQKCHVKNKDIR 172
Score = 100 bits (240), Expect = 2e-20
Identities = 45/100 (45%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Frame = +2
Query: 5 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSK 181
I+A++ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WFG++
Sbjct: 4 ILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWFGTR 63
Query: 182 KELAAVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTVS 301
+ +AA+RT SHV+N+I GVTKG+ + P+ S
Sbjct: 64 RTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINAS 103
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 107 bits (257), Expect = 2e-22
Identities = 52/84 (61%), Positives = 63/84 (75%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
YKMR VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV S KDE+I+EGN
Sbjct: 88 YKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIILEGN 147
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
SLE+VS SAA I+Q V+N+DIR
Sbjct: 148 SLENVSQSAANIKQICNVRNKDIR 171
Score = 78.2 bits (184), Expect = 1e-13
Identities = 38/99 (38%), Positives = 61/99 (61%)
Frame = +2
Query: 5 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 184
I ++ + IP G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS+K
Sbjct: 5 IYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKK-QGNTIKFIVWHGSRK 63
Query: 185 ELAAVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTVS 301
A +R+V S + NMI GVT+GF + L P+ ++
Sbjct: 64 HNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININ 102
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 101 bits (241), Expect = 2e-20
Identities = 43/84 (51%), Positives = 60/84 (71%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T + K KDE+++ GN
Sbjct: 106 YKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGN 165
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
SLE +S S A IQ + +K +D+R
Sbjct: 166 SLELLSQSCATIQLRSAIKYKDVR 189
Score = 85.4 bits (202), Expect = 9e-16
Identities = 38/87 (43%), Positives = 57/87 (65%)
Frame = +2
Query: 41 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 220
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 221 ENMIKGVTKGFHTRCVLCMLTSPLTVS 301
ENMI GVTKG+ + P+ V+
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVA 120
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 99.5 bits (237), Expect = 5e-20
Identities = 45/84 (53%), Positives = 59/84 (70%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
YKMRAVYAHFPIN + EIRNFLGEK +R + M GVT+ QKD++++EGN
Sbjct: 150 YKMRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGN 209
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
++ VS SAAL+ +T V+N+DIR
Sbjct: 210 DIDLVSQSAALLHGATLVRNKDIR 233
Score = 41.1 bits (92), Expect = 0.019
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = +2
Query: 92 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGF 253
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT GF
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGF 148
Score = 32.7 bits (71), Expect = 6.5
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 2 QIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 106
QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 3 QIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 96.7 bits (230), Expect = 4e-19
Identities = 48/86 (55%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 YKMRAVYAHFPINC--VTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIE 429
YKMR VYAHFPIN V +G IE+RNFLG+K IR V + GVT+ S KDE+++
Sbjct: 88 YKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLS 147
Query: 430 GNSLEDVSSSAALIQQSTTVKNRDIR 507
GNS+EDVS +AA +QQ V+N+DIR
Sbjct: 148 GNSVEDVSQNAADLQQICRVRNKDIR 173
Score = 89.8 bits (213), Expect = 4e-17
Identities = 44/99 (44%), Positives = 64/99 (64%)
Frame = +2
Query: 5 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 184
I Q++++P+G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G +K
Sbjct: 4 IQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGGRK 63
Query: 185 ELAAVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTVS 301
+AA+RTV S V+NMI GVTKG+ + P+ V+
Sbjct: 64 HVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVN 102
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 91.1 bits (216), Expect = 2e-17
Identities = 43/84 (51%), Positives = 55/84 (65%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
YKMR YAHFPI + N IEIRNF+ + RR++ PGVT+ S KDELI+ G
Sbjct: 86 YKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVKDELILRGI 145
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
S+EDVS +AA I +S V N+D+R
Sbjct: 146 SIEDVSHTAARIHESLKVPNKDLR 169
Score = 77.0 bits (181), Expect = 3e-13
Identities = 37/99 (37%), Positives = 54/99 (54%)
Frame = +2
Query: 5 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 184
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGK 61
Query: 185 ELAAVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTVS 301
A RT+CSH+ENM KGVT GF + L P+ +
Sbjct: 62 RNALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAAT 100
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 87.4 bits (207), Expect = 2e-16
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
Y ++ +YAHFPIN T+ S +EIRNFLGEK IR++ M GV + + +KDE+ + G+
Sbjct: 89 YILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVKIKKNEAKKDEISVFGS 148
Query: 436 SLEDVSSSAALIQQSTTVKNRDIRSSW-MVFMYLRKQL 546
L VS +AA IQQS KN+D+R +++ ++K L
Sbjct: 149 DLNLVSLNAASIQQSCQAKNKDLRKFLDGIYIIMKKNL 186
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Frame = +2
Query: 17 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELA 193
+K+KIP + + K+R ++ G G + R+F+ + IR + + + W KK+LA
Sbjct: 8 RKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWMAGKKQLA 67
Query: 194 AVRTVCSHVENMIKGVTKGF 253
+ T+ SH+ NMI GV+ GF
Sbjct: 68 KLNTIASHITNMIVGVSLGF 87
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 85.8 bits (203), Expect = 7e-16
Identities = 48/107 (44%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Frame = +2
Query: 5 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKWFGS 178
I++NQ V IP + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW+G+
Sbjct: 4 ILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKWWGN 63
Query: 179 KKELAAVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTVSPL-RVI 316
+KELA V T+CS V+N IK VT G T V + TV+PL RV+
Sbjct: 64 RKELATVHTICSPVQNTIKWVTLG--TSRVKESVGKEKTVTPLDRVV 108
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 83.8 bits (198), Expect = 3e-15
Identities = 41/84 (48%), Positives = 54/84 (64%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
YKMR VYAHFP+ V + I+++NFLGEK R ++M GV V KDE+ +EGN
Sbjct: 98 YKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRHIEMYDGVVV--KKLGKDEICLEGN 155
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
+E VS SAA I + V+N+DIR
Sbjct: 156 DVEKVSQSAANIHAANLVRNKDIR 179
Score = 73.3 bits (172), Expect = 4e-12
Identities = 35/103 (33%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
Frame = +2
Query: 17 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 169
+ V IP+G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 170 FGSKKELAAVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTV 298
+G++++ A VRT+ SH++NMI GVTKG+ + + P+T+
Sbjct: 69 YGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTL 111
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 82.6 bits (195), Expect = 6e-15
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVV-NSPKQKDELIIEG 432
+KM YAHFPI +EI+NFLGEK IR +K PGVT+ N ++K+ L ++G
Sbjct: 97 FKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKIIRTIKCLPGVTITRNEAEEKNVLTLQG 156
Query: 433 NSLEDVSSSAALIQQSTTVKNRDIR 507
N L +VS + ALI Q+ VKN+DIR
Sbjct: 157 NDLNNVSLTCALIHQACAVKNKDIR 181
Score = 70.5 bits (165), Expect = 3e-11
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 9/108 (8%)
Frame = +2
Query: 5 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------LLK 157
I+ + V IP+ + + KS++V VKGPRG L +NF+H A+DI++ VN + +
Sbjct: 4 ILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKSRVS 63
Query: 158 VEKWFGSKKELAAVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTVS 301
V W +K+ V +V S + NMI+GVT G+ + VL P+ ++
Sbjct: 64 VRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIIN 111
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 77.4 bits (182), Expect = 2e-13
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Frame = +2
Query: 23 VKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKEL 190
++IP DG TV V KSR + V G G L+R F+H+ VD+++V R + VE WFG K
Sbjct: 69 IQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVEMWFGLTKNK 128
Query: 191 AAVRTVCSHVENMIKGVTKGF 253
A +RTVCSH+ENMI GV + +
Sbjct: 129 ACIRTVCSHIENMITGVRQRY 149
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = +1
Query: 247 RLPYKMRAVYAHFPINCVTTEGNSIIEIRNFL 342
R YK+R VYAHFPIN T S IEIRNFL
Sbjct: 148 RYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 76.2 bits (179), Expect = 5e-13
Identities = 39/84 (46%), Positives = 50/84 (59%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
Y M+AVY HF IN E I+ ++NFLGEK ++R +M G V ++KD ++IEG
Sbjct: 107 YTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GAARVRLDERKDTIVIEGP 165
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
SL DVS SA I KNRD R
Sbjct: 166 SLSDVSQSAGTITNECKAKNRDSR 189
Score = 46.8 bits (106), Expect = 4e-04
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 QIVANQKVKIPDGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLLKVEKWFG 175
+I+ + VK+P+ T + ++ T +GP+G +++ +H L DI N +++ W G
Sbjct: 23 RILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---IRIRLWNG 79
Query: 176 SKKELAAVRTVCSHVENMIKGVTKGF 253
+K +A TV S + N IK VT GF
Sbjct: 80 KRKAMALAITVESLLRNAIKAVTVGF 105
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 73.7 bits (173), Expect = 3e-12
Identities = 38/94 (40%), Positives = 60/94 (63%)
Frame = +2
Query: 17 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 196
++++IP+G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 197 VRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTV 298
VRT +H+ NMIKGVT+GF R + P+TV
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTV 101
Score = 62.5 bits (145), Expect = 7e-09
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PGVTV + E+ +EG
Sbjct: 88 YRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV---KVKGSEIEVEGI 142
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
E V +AA I+Q+T + D R
Sbjct: 143 DKEAVGQTAANIEQATRITKWDRR 166
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 67.3 bits (157), Expect = 2e-10
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PGVTV + E+I+EG
Sbjct: 88 YKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV---KVRGQEIIVEGI 142
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
E V +AA I+Q+T + D R
Sbjct: 143 DKEAVGQTAANIEQATRITKWDRR 166
Score = 64.1 bits (149), Expect = 2e-09
Identities = 34/94 (36%), Positives = 57/94 (60%)
Frame = +2
Query: 17 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 196
++V+IP+G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 197 VRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTV 298
RT +H+ NMIKGVT+GF + + P++V
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPISV 101
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +2
Query: 17 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLA-VDIRMVNPRLLKVEKWFGSKKELA 193
+ V IP+G+ VHV + V V+GP G ++++F H + IR V + VE + +KK+ A
Sbjct: 8 ESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFHATKKDYA 66
Query: 194 AVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTV 298
V T+ S + NMI GVTKG+ + + P+++
Sbjct: 67 LVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMSL 101
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/81 (39%), Positives = 51/81 (62%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
YK++ VYAHFP++ + E + II I NFLGE+ R + PG V +KD++I+EG
Sbjct: 88 YKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAKV---KIEKDDVIVEGI 142
Query: 436 SLEDVSSSAALIQQSTTVKNR 498
L+ V+ +AA I +T ++ +
Sbjct: 143 DLDAVAQTAANIHLATHLRGK 163
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 63.7 bits (148), Expect = 3e-09
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV-VNSPKQKDELIIEG 432
YKM VY+HFPI +E + F+G K + V GV + N KDE+ IEG
Sbjct: 96 YKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVTAPEGVRIWSNESVAKDEINIEG 155
Query: 433 NSLEDVSSSAALIQQSTTVKNRDIR 507
+LEDVS I Q T +K++D+R
Sbjct: 156 ANLEDVSLVCGQIHQLTKIKDKDLR 180
Score = 46.0 bits (104), Expect = 7e-04
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Frame = +2
Query: 5 IVANQKVKIPDGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLKVE 163
++ + KIP+ + VKS +VT++ P+ L ++ HL +D N +
Sbjct: 5 VLHQEHFKIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIVAR 64
Query: 164 KWFGSKKELAAVRTVCSHVENMIKGVTKGF 253
WFG++K LA + T+ V+NMI GVT G+
Sbjct: 65 CWFGNRKLLARIGTLFGIVKNMITGVTLGW 94
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 63.7 bits (148), Expect = 3e-09
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +1
Query: 259 KMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNS 438
K++ VYAHFPI + +G I+ + NF GE+ R+ K+ G VV+ + +++I+ G+
Sbjct: 73 KLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGEDVIVTGHV 127
Query: 439 LEDVSSSAALIQQSTTVKNRDIR 507
L DVS +AA ++Q T VKN+D R
Sbjct: 128 LTDVSQTAANLEQGTKVKNKDHR 150
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 61.3 bits (142), Expect = 2e-08
Identities = 37/84 (44%), Positives = 50/84 (59%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
Y+M+ VY+HFPI + +GN + EI NFLGEK R K+ GVTV DE+ I G
Sbjct: 84 YRMKVVYSHFPIQ-LKQQGNRL-EITNFLGEKQPRIAKIIEGVTVKIG---NDEVTITGI 138
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
E V ++AA I+ +T + RD R
Sbjct: 139 DKEKVGNTAANIEHATRITKRDPR 162
Score = 50.8 bits (116), Expect = 2e-05
Identities = 28/82 (34%), Positives = 47/82 (57%)
Frame = +2
Query: 17 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 196
++V+IP G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 197 VRTVCSHVENMIKGVTKGFHTR 262
T+ +H +NMI+GV G+ R
Sbjct: 64 TGTLEAHAKNMIRGVADGYEYR 85
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
Y ++ VYAHFPI V EGN +I I NF+GEK+ RR K+ V S + ++ + G
Sbjct: 106 YHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGI 160
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
+E+ +AA ++Q+T +K +D R
Sbjct: 161 DIEECGQTAANLEQATKIKRKDPR 184
Score = 38.3 bits (85), Expect = 0.13
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Frame = +2
Query: 2 QIVANQKVKIPDGLTVHVKS---RLVTVK--GPRGVLKRNFKHLAVDIRMVNPRLLKVEK 166
++ + V++P+ + + ++ R T+K GP+G R K+ V I + + ++ +V
Sbjct: 17 EVYEERVVEVPEDVQLTIEGDSFRGYTLKAVGPKGENTRYLKYRGVFIEVGDGKV-RVYT 75
Query: 167 WFGSKKELAAVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTV 298
KK A V T H+EN+I GV +GF + P+ V
Sbjct: 76 TSPKKKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIKV 119
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 60.1 bits (139), Expect = 4e-08
Identities = 39/84 (46%), Positives = 49/84 (58%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
YK+R+VYAHFP+N V +M GV S QKDELI+EGN
Sbjct: 55 YKVRSVYAHFPLNVV----------------------QMRTGVACSVSQAQKDELILEGN 92
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
E VS+SAALIQ++T V+N+DIR
Sbjct: 93 DTELVSNSAALIQKATAVENQDIR 116
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = +2
Query: 182 KELAAVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTVSPLR 310
KELA VRT+CSHV+NMIKGV+ GF + PL V +R
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVVQMR 72
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 58.8 bits (136), Expect = 9e-08
Identities = 27/97 (27%), Positives = 54/97 (55%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ ++ IP+ + V ++ ++ V GP+G ++R F H + + VN + +E +F +++E
Sbjct: 5 IIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFATRRE 63
Query: 188 LAAVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTV 298
+ T SH++NM++GV F R +C P+ V
Sbjct: 64 KRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMRV 100
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK--YIRRVKMAPGVTV-VNSPKQKDELII 426
Y+++ Y HFP+ V EGN +I + NFLGEK I+ + V V + K + E+++
Sbjct: 87 YRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKAPIIKELPYLDKVKVKIEQNKDETEIVV 144
Query: 427 EGNSLEDVSSSAALIQQST 483
E E A++I+QST
Sbjct: 145 ESPDKEKAGIVASMIEQST 163
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +2
Query: 14 NQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKE 187
NQ VKIP+ + +V VK RG L+R+F H+ +++R++ R L+V+KW + K
Sbjct: 7 NQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKWLKTMK- 59
Query: 188 LAAVRTVCSHVENMIKGV 241
LA T+ SHV+NMIK V
Sbjct: 60 LATAHTIYSHVQNMIKRV 77
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 56.8 bits (131), Expect = 4e-07
Identities = 29/84 (34%), Positives = 52/84 (61%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
Y ++ + HFPI+ V G+ + ++ N +GEK IRR K+ PGV V + +++++EG+
Sbjct: 91 YYLKVISTHFPIS-VKVSGDEV-QVSNLIGEKNIRRAKILPGVKVT---VKGEDIVVEGS 145
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
+ +V+ +AA I+ ST + D R
Sbjct: 146 DIYNVAQTAANIESSTKIVGYDRR 169
Score = 50.4 bits (115), Expect = 3e-05
Identities = 25/95 (26%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +2
Query: 17 QKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELA 193
++++IPD + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F +++ A
Sbjct: 11 EEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTFADRRKKA 69
Query: 194 AVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTV 298
+ ++ +H++NMI G G+ + P++V
Sbjct: 70 LLYSIIAHIKNMITGTINGYRYYLKVISTHFPISV 104
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 56.4 bits (130), Expect = 5e-07
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +1
Query: 199 EDSLFTCREHD*RSN*RLPYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 378
++ L +C EHD Y+MR+VYA FP N + E S+IE + +G+KYI RV++
Sbjct: 20 QNHLQSCSEHDQGG---FHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRT 76
Query: 379 GVTVVNSPKQKDELI 423
V S QK+EL+
Sbjct: 77 SVAFYASQAQKNELM 91
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/92 (29%), Positives = 53/92 (57%)
Frame = +2
Query: 23 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 202
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 203 TVCSHVENMIKGVTKGFHTRCVLCMLTSPLTV 298
T SH++N+I GV++GF + + P+ V
Sbjct: 68 TFASHLKNLIIGVSEGFECKMNIVYAHFPMQV 99
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 53.6 bits (123), Expect = 3e-06
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +1
Query: 259 KMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNS 438
KM+ V+AHFPI V EG I+ I NF GE+ R + V+ PK +D +++ G
Sbjct: 91 KMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKVI--PKGED-VLLTGEV 145
Query: 439 LEDVSSSAALIQQSTTVKNRDIR 507
D++ +AA I+ +T VKN+D R
Sbjct: 146 WTDITQTAANIELTTKVKNKDHR 168
Score = 46.8 bits (106), Expect = 4e-04
Identities = 23/93 (24%), Positives = 52/93 (55%)
Frame = +2
Query: 20 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 199
+V+IP+G+TV ++ +GP G +NF+++ V I + + + + ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGK-VNLKTIGERKRDYAIL 70
Query: 200 RTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTV 298
T S + N+ +G+ +G+ + + P+TV
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPITV 103
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 53.6 bits (123), Expect = 3e-06
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
Y M Y+HFP+ V EG+ ++ I NFLGEK RR + G T V +EL + G
Sbjct: 83 YGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-HGDTDVEI--DGEELTVSGP 137
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
+E V +AA I+Q T + ++D+R
Sbjct: 138 DIEAVGQTAADIEQLTRINDKDVR 161
Score = 39.1 bits (87), Expect = 0.075
Identities = 21/78 (26%), Positives = 42/78 (53%)
Frame = +2
Query: 20 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 199
+++IP+ + +TV+G G + R + +D+ V+ + +E + K ++ +
Sbjct: 5 ELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTI 63
Query: 200 RTVCSHVENMIKGVTKGF 253
T SH+ENM GVT+G+
Sbjct: 64 GTFQSHIENMFHGVTEGW 81
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 53.2 bits (122), Expect = 4e-06
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
YK++ +Y HFP+ V +GN ++ I NFLG K + + GV V K K++++IEG
Sbjct: 92 YKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIPKGVKV--EVKGKEDIVIEGI 147
Query: 436 SLEDVSSSAALIQQST 483
E VS+ AA +Q +T
Sbjct: 148 DRELVSTFAAAVQAAT 163
Score = 43.2 bits (97), Expect = 0.005
Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Frame = +2
Query: 17 QKVKIPDGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSK 181
++V+IP G++V ++ +V VKGP G + + FK+ V + + + +++ +E + K
Sbjct: 8 EEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-MEVFKARK 66
Query: 182 KELAAVRTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTV 298
+E A + T ++NM GVT+G+ + + P+ V
Sbjct: 67 REYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPMLV 105
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 52.4 bits (120), Expect = 8e-06
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 172
+A++ IPDG+ + V + + +KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 173 GSKKELAAVR-TVCSHVENMIKGVTKGF 253
+K L A+R T SHV NMIKGVT+G+
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIKGVTEGY 92
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +2
Query: 23 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 202
+KIPD + + VK LV V+G RG L ++ K ++++++ N ++ V + F KK A
Sbjct: 9 IKIPDTVKIDVKGNLVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHG 66
Query: 203 TVCSHVENMIKGVTKGF 253
S + NM+KGVT+GF
Sbjct: 67 LYRSLIFNMVKGVTEGF 83
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 50.8 bits (116), Expect = 2e-05
Identities = 25/84 (29%), Positives = 43/84 (51%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
Y ++ VY+HFPI+ + + +EI N G K I + V V + K E+I+
Sbjct: 90 YLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSVQVCTNNLNKKEIILLSK 149
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
+E + ++LIQ ++ N+D R
Sbjct: 150 DIETLGILSSLIQNKCSINNKDCR 173
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 IVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKWFGS 178
++ + +P + + +K + + KG G L + F + V+I + + L V ++ +
Sbjct: 4 VLVQSIINVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCYYNN 63
Query: 179 KKELAAVRTVCSHVENMIKGVTKGF 253
K A VRT+ S + NMI GV+KGF
Sbjct: 64 KSSSAIVRTITSIIYNMIIGVSKGF 88
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 49.6 bits (113), Expect = 5e-05
Identities = 30/84 (35%), Positives = 51/84 (60%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
Y+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++ G T V+ + D L + G
Sbjct: 87 YEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-GETQVS--VKGDRLFLNGP 141
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
S +DV +AA I+++T +K D R
Sbjct: 142 SKKDVGETAANIERATIIKGFDPR 165
Score = 34.7 bits (76), Expect = 1.6
Identities = 22/93 (23%), Positives = 44/93 (47%)
Frame = +2
Query: 23 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 202
++IP + V + ++++ L++ F V + +V +K+ K + +E V
Sbjct: 10 IEIPKDVKVGLSGTMLSMTFGNKKLEKKFADNYVRL-LVEDNKIKIVKSKNNSRERGIVG 68
Query: 203 TVCSHVENMIKGVTKGFHTRCVLCMLTSPLTVS 301
T S + NM+KG+ +GF + P+ VS
Sbjct: 69 TWASEISNMVKGLKEGFQYEMKIDYSHFPMRVS 101
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 49.2 bits (112), Expect = 7e-05
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 184
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 185 ELAAVRTVCSHVENMIKGVTKGFHTRCVL 271
A T + V NM++GV++GF + L
Sbjct: 63 TRAMAGTTRALVNNMVQGVSQGFERKLQL 91
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 49.2 bits (112), Expect = 7e-05
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
V + V+IP+G+ + + + VTVKGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 188 LAAVRTVCSHVENMIKGVTKGF 253
A T S + NM+ GV+KGF
Sbjct: 62 RALHGTTRSLINNMVIGVSKGF 83
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 48.8 bits (111), Expect = 9e-05
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA-PGVTVVNSPKQKDELIIEG 432
YK++ VY+HFP + + I NF+GE R ++ P T V Q ++I+ G
Sbjct: 105 YKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEV--IVQGQDIIVRG 162
Query: 433 NSLEDVSSSAALIQQSTTVKNRDIR 507
E V +AA ++Q+T +K+RD R
Sbjct: 163 IDKEAVGQTAANLEQATYIKDRDPR 187
Score = 42.3 bits (95), Expect = 0.008
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Frame = +2
Query: 5 IVANQKVKIPDGLTVHVKSRL-----VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKW 169
IV ++VKI D + + + R VTVKGP+G + + F + V + + + ++ +
Sbjct: 17 IVMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAAT 75
Query: 170 FGSKKELAAVRTVCSHVENMIKGVTKG 250
++++ A + + +++ENM KGVT+G
Sbjct: 76 RSNRRQKAILGMIKAYIENMQKGVTEG 102
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 48.4 bits (110), Expect = 1e-04
Identities = 29/93 (31%), Positives = 45/93 (48%)
Frame = +2
Query: 20 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 199
K+ +P+G+T V VTV L R F+H +++R + L+V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGE-LEVFVNLPRKKEKALA 68
Query: 200 RTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTV 298
T +H+ NM +GV GF + P+T+
Sbjct: 69 GTWAAHLTNMARGVDSGFEYKLKAVYSHFPMTI 101
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 46.4 bits (105), Expect = 5e-04
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 9/72 (12%)
Frame = +2
Query: 62 RLVTVKGPRGVLKRNFKHLAVDIRMVNP-------RLLKVE--KWFGSKKELAAVRTVCS 214
+L+ + GPRG+L RNFKH ++DI++ L+K+E K+ V+++ +
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQVQKEIKEIKQIGLIKIEYQDVVQYSKQRFQVKSIAA 112
Query: 215 HVENMIKGVTKG 250
++NMI+G+T G
Sbjct: 113 QIKNMIRGITSG 124
Score = 38.3 bits (85), Expect = 0.13
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 379 GVTVVNSP-KQKDELIIEGNSLEDVSSSAALIQQSTTVKNRDIR 507
GV + ++K+ LI+ N L +VS + ALI Q+ VKN+DIR
Sbjct: 124 GVVITRKEAEEKNVLILSANDLNNVSLTCALIHQACAVKNKDIR 167
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 46.0 bits (104), Expect = 7e-04
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = -2
Query: 507 SDIPILDCSRLLNESSRARDIFQRVAFND*FILLFWRVNDSHTRCHLYPSDVFLTQEVTY 328
+DI + D + LLN SS R+ FQ V N+ FILL R T S+ F TQE++
Sbjct: 36 TDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFMDFNFSNSFFTQEISN 95
Query: 327 LNN*ITL--SGDTVNGEVSIHSTHLVW 253
N +T+ + VN E+ I+ +HLV+
Sbjct: 96 FNVILTIFFNNVNVNWEMRINKSHLVF 122
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/84 (32%), Positives = 45/84 (53%)
Frame = +1
Query: 256 YKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGN 435
Y M+ + HFP+ V+ G+ +I + NFLGEK R K+ G V + D + I G
Sbjct: 87 YHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV---SVKGDRITINGI 141
Query: 436 SLEDVSSSAALIQQSTTVKNRDIR 507
+ +AA I+++T +++ D R
Sbjct: 142 DKRKIGETAANIERATYIRHFDAR 165
Score = 34.7 bits (76), Expect = 1.6
Identities = 24/94 (25%), Positives = 43/94 (45%)
Frame = +2
Query: 20 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 199
++K+PD + +++ + +KG G R F+ V + +K+ +K V
Sbjct: 9 EIKLPDDVQATMENNELKIKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNKYTKGIV 67
Query: 200 RTVCSHVENMIKGVTKGFHTRCVLCMLTSPLTVS 301
T S + +I+GVTKGF + P+ VS
Sbjct: 68 GTWYSETKLLIEGVTKGFEYHMKIDFTHFPMRVS 101
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 44.8 bits (101), Expect = 0.002
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 184
V + ++IP +TV + + V VKGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 185 ELAAVRTVCSHVENMIKGVTKGF 253
A T S + NM++GV+KGF
Sbjct: 62 HRALHGTTRSLLGNMVEGVSKGF 84
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 44.4 bits (100), Expect = 0.002
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 23 VKIPDGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 199
+ IP G+ V V +VTVKG +G L++ F + V+I + + ++ K K+E A
Sbjct: 9 IPIPKGVEVKVSPDNVVTVKGAKGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMH 66
Query: 200 RTVCSHVENMIKGVTKGF 253
T + + NM+KGVT+GF
Sbjct: 67 GTTRAIIANMVKGVTEGF 84
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIR----MVNPRLLKVEKWF 172
+A + + +P G+TV +K +V VKGP+G L + F ++ +++ V P ++ +
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKS 63
Query: 173 GSKKELAAVRTVCSHVENMIKGVTKGF 253
+K T S + NM+ GVT+G+
Sbjct: 64 DWRKVKMFQGTYWSLIRNMVVGVTEGY 90
>UniRef50_P44347 Cluster: 50S ribosomal protein L6; n=18;
Gammaproteobacteria|Rep: 50S ribosomal protein L6 -
Haemophilus influenzae
Length = 177
Score = 42.7 bits (96), Expect = 0.006
Identities = 30/88 (34%), Positives = 45/88 (51%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
VA V IP G+ V + +L+TVKG G L R H +V+++ N + + G +
Sbjct: 4 VAKAPVNIPAGVEVKLDGQLLTVKGKNGELSRKI-HESVEVKQDNGQFTFTPRE-GFVEA 61
Query: 188 LAAVRTVCSHVENMIKGVTKGFHTRCVL 271
A T + V M+ GVT+GF + VL
Sbjct: 62 NAQSGTARALVNAMVIGVTEGFTKKLVL 89
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 42.3 bits (95), Expect = 0.008
Identities = 29/88 (32%), Positives = 43/88 (48%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
VA +KIP G+ V+V + +TVKG G L R H AV + + L + S
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICA-NDSPGS 62
Query: 188 LAAVRTVCSHVENMIKGVTKGFHTRCVL 271
A T + + NM++GV GF + V+
Sbjct: 63 NALAGTARAVLANMVQGVHTGFQRKLVM 90
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 41.9 bits (94), Expect = 0.011
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ + IPD ++V + VTVKGP+G LKR V + V+ ++ K++
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVDNTIVVAPT--SEKRQ 60
Query: 188 LAAVRTVC-SHVENMIKGVTKGF 253
+C + V NMI+GV+KG+
Sbjct: 61 SRERHGLCRTLVANMIEGVSKGY 83
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 41.5 bits (93), Expect = 0.014
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +2
Query: 2 QIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRLLKVEKWFG 175
+++ +KV+IP+G +V + R++TV+G R R+ H L +D+ + RL ++
Sbjct: 3 RLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL----RYGM 58
Query: 176 SKKELAAVRTVCSHVENMIKGVTKGFHTRCVLCMLT 283
+++ VC +N I G G+ LC T
Sbjct: 59 AQQGAQQADYVCICDQNCIVGCMSGYEYTLRLCTST 94
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 40.3 bits (90), Expect = 0.033
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ N+ + +P G+ + +VTVKGP+G L R F ++IR V + + + SK+
Sbjct: 4 IGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEM 61
Query: 188 LAAVRTVCSHVENMIKGVTKGF 253
T + + NM+ GV++GF
Sbjct: 62 KTIHGTTRALLNNMVVGVSEGF 83
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 39.9 bits (89), Expect = 0.043
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ Q + +P G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 188 LAAVRTVCSHVENMIKGVTKGF 253
A + V N +KGV+ G+
Sbjct: 62 RALHGLTRTLVANAVKGVSDGY 83
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 39.5 bits (88), Expect = 0.057
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ + + +P + + + + + VKGP+G L R+ L + ++ N ++L V + +
Sbjct: 4 IGRRPIALPAKVEIQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRP 60
Query: 188 LAAVRTVC-SHVENMIKGVTKGFHTRCVL 271
+ +C + V NM+ GV+KGF R L
Sbjct: 61 ARQLHGLCRTLVANMVDGVSKGFERRLEL 89
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 39.5 bits (88), Expect = 0.057
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 184
V N+ +++P+ + V +K R ++V+GP+G L+ F H + + N + K +
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH---RLTITNENKVITVKRPNDEI 60
Query: 185 ELAAVR-TVCSHVENMIKGVTKGF 253
+ + T + + NM++GV+KGF
Sbjct: 61 FMKKIHGTTRALLSNMVEGVSKGF 84
>UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast
precursor; n=8; Magnoliophyta|Rep: 50S ribosomal protein
L6, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 223
Score = 39.5 bits (88), Expect = 0.057
Identities = 21/88 (23%), Positives = 44/88 (50%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ Q + +P +T+ ++ + + VKGP G L + V++ L+V+K +++
Sbjct: 46 IGKQPIAVPSNVTIALEGQDLKVKGPLGELALTYPR-EVELTKEESGFLRVKKTVETRRA 104
Query: 188 LAAVRTVCSHVENMIKGVTKGFHTRCVL 271
+ +NM+ GV+KGF + +L
Sbjct: 105 NQMHGLFRTLTDNMVVGVSKGFEKKLIL 132
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 38.7 bits (86), Expect = 0.100
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKK 184
V + + +P + +++K+ LV +KG GVL N L A+++ + ++ + K
Sbjct: 4 VGRRVLTLPKDVELNIKNNLVEIKGKLGVLTFNVNPLIAIEVENHEVKTIRANE---EKH 60
Query: 185 ELAAVRTVCSHVENMIKGVTKGF 253
T S +ENMI GV+KGF
Sbjct: 61 TKQLHGTTNSIIENMIIGVSKGF 83
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 38.7 bits (86), Expect = 0.100
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ +K+P G+ V + VTVKGP+G L R+F+ V I L+ G+ K
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFRP-EVTINREGDYLVVAP--VGTDKA 60
Query: 188 LAAVRTVC-SHVENMIKGVTKGF 253
+ + + ++NMI GV GF
Sbjct: 61 TRSFFGLSRTLLDNMIVGVKDGF 83
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 38.7 bits (86), Expect = 0.100
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Frame = +2
Query: 23 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVE---KWFGSKKELA 193
+ IP G+TV +K +VTVKGP+G L + + + A+++ + + + E + + K+
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ-YVNPAINVAIEDGHVTLTENEKEMIDNPKQKH 67
Query: 194 AVRTVC-SHVENMIKGVTKGF 253
A + S V NM+ GV++G+
Sbjct: 68 AFHGLYRSLVHNMVVGVSEGY 88
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 38.3 bits (85), Expect = 0.13
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 56 KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 232
K VTV+GP+G L+ N H + + + R +K+++ A T+ + ++NMI
Sbjct: 22 KEHKVTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDRSFHKAIHGTMAALIKNMI 80
Query: 233 KGVTKGF 253
KGVT+GF
Sbjct: 81 KGVTEGF 87
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 37.9 bits (84), Expect = 0.17
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ + IPD + V + VTVKGP+G LKR V + V+ ++ +K+
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVDNSIVVAPT--STKRS 60
Query: 188 LAAVRTVC-SHVENMIKGVTKGF 253
+C + V NM+ GV++G+
Sbjct: 61 SRERHGLCRTLVANMVIGVSQGY 83
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 37.9 bits (84), Expect = 0.17
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGS 178
+A + + P+ + V+ K + V+GP+G L+ N H + + + R +K+++
Sbjct: 4 LAKKPIPYPENVKVNYVEKEHKIVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDR 62
Query: 179 KKELAAVRTVCSHVENMIKGVTKGF 253
A T+ + V+NMIKGVT+GF
Sbjct: 63 SFHKAIHGTMAALVKNMIKGVTEGF 87
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 37.5 bits (83), Expect = 0.23
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSKK 184
V + IP+G+ V + V + GP+G L + FK ++A+ ++ L V+ +K
Sbjct: 4 VGKLPITIPEGVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKN 60
Query: 185 ELAAVRTVCSHVENMIKGVTKGF 253
A T S + NMI GV +GF
Sbjct: 61 ARAMWGTARSIICNMITGVKEGF 83
>UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15;
Bacteria|Rep: 50S ribosomal protein L6 - Chlorobium
tepidum
Length = 179
Score = 37.5 bits (83), Expect = 0.23
Identities = 24/82 (29%), Positives = 38/82 (46%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ +++ D V VK ++ V GP+G L + I V + V++ SK+
Sbjct: 4 IGKMPIRLADQAQVEVKENMINVTGPKGALSQALVDEV--IVSVADGAVTVQRKDDSKRA 61
Query: 188 LAAVRTVCSHVENMIKGVTKGF 253
A V NM++GVTKGF
Sbjct: 62 RAMHGLYRMLVSNMVEGVTKGF 83
>UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16;
Bacteria|Rep: 50S ribosomal protein L6 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 177
Score = 37.5 bits (83), Expect = 0.23
Identities = 25/82 (30%), Positives = 39/82 (47%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ + V IP G+ V + + VTVKGP+G L V+++ LL + +K+
Sbjct: 4 IGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIAD-EVEVKQEGAELLLAPR-VDTKRA 61
Query: 188 LAAVRTVCSHVENMIKGVTKGF 253
+ V NM+ GVT GF
Sbjct: 62 KGMWGLSRTLVANMVHGVTVGF 83
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 37.1 bits (82), Expect = 0.30
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIR-MVNPRLLKVEKWFGSKK 184
+ N V IP+ + V + ++ +KGP G L + + DI ++N + V++ KK
Sbjct: 12 IGNIPVLIPNNVFVKKQDNIIYIKGPLGKLN---QEIIGDINIIINHNNIIVKRKHNDKK 68
Query: 185 ELAAVRTVCSHVENMIKGVTKGFHTRCVL 271
A + NMIKGV+ GF + L
Sbjct: 69 NRALHGLYRMLIYNMIKGVSNGFKKKLEL 97
>UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29;
Bacteria|Rep: 50S ribosomal protein L6 - Mycoplasma
pulmonis
Length = 179
Score = 37.1 bits (82), Expect = 0.30
Identities = 26/82 (31%), Positives = 40/82 (48%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
V + ++IP G V + VKG G L R F V+I+ N + + VE+ K
Sbjct: 4 VGKRIIQIPSGTEVKIDGSFFEVKGKLGSLSRLFSPF-VNIKHENNQ-ISVERLNELKPT 61
Query: 188 LAAVRTVCSHVENMIKGVTKGF 253
T + + NM+KGV++GF
Sbjct: 62 KQLHGTTNALIANMVKGVSEGF 83
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 36.7 bits (81), Expect = 0.40
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +2
Query: 29 IPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTV 208
IP+ + + ++ + V G G L F H + ++ N + L V + + A + T
Sbjct: 13 IPNEIQITIQDCCILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRYRNHVNRALLGTT 71
Query: 209 CSHVENMIKGVTKGF 253
CS + +MI GVT+GF
Sbjct: 72 CSLINSMIVGVTEGF 86
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 36.3 bits (80), Expect = 0.53
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 115
+ N+ V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_Q4G353 Cluster: Chloroplast 50S ribosomal protein L6; n=2;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L6 -
Emiliania huxleyi
Length = 181
Score = 35.9 bits (79), Expect = 0.70
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKR---NFKHLAVDIRMVNPRLLKVEKWFGS 178
+ Q + IPD + + ++ + V V GP+G L R +F +D L K E+ S
Sbjct: 4 IGKQYISIPDKVNIRLEGQKVFVDGPKGKLTRILPSFICCTIDEPEKKVFLEKAEENKLS 63
Query: 179 KKELAAVRTVCSHVENMIKGVTKGFHTRCVL 271
+ RT+ S NM+ GV+ G+H + +
Sbjct: 64 QALYGLSRTLLS---NMVTGVSSGWHKKLTI 91
>UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 187
Score = 35.1 bits (77), Expect = 1.2
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ + + +P +T+ + + VTVKGP+G L R F ++ +V V K +
Sbjct: 4 IGKRPIPLPKNVTLTLDGQQVTVKGPKGQLSRVF---PPEVNVVQEGEAIVVKRRDDSRP 60
Query: 188 LAAVRTVC-SHVENMIKGVTKGF 253
+C + + NM++GV++GF
Sbjct: 61 AKERHGLCRTLLANMVEGVSQGF 83
>UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1;
Psychromonas sp. CNPT3|Rep: 50S ribosomal protein L6 -
Psychromonas sp. CNPT3
Length = 128
Score = 34.7 bits (76), Expect = 1.6
Identities = 25/88 (28%), Positives = 43/88 (48%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+A + + G+ V V + +T+KG +G L R AV +++ + ++ G K
Sbjct: 4 IAKAPITVLAGVEVKVNGQEITLKGGKGELVRTLND-AVVVKLEDG-VITFAPVEGIKDA 61
Query: 188 LAAVRTVCSHVENMIKGVTKGFHTRCVL 271
A T ++V NM+ GVT GF +L
Sbjct: 62 WAQAGTARANVNNMMIGVTTGFKKTLLL 89
>UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular
organisms|Rep: 50S ribosomal protein L6 - Lyngbya sp.
PCC 8106
Length = 181
Score = 34.7 bits (76), Expect = 1.6
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ + + IP +T ++ + + VKGP+G L R + + + L+K ++
Sbjct: 4 IGKRPIPIPPKVTFTIEGQHIIVKGPKGELSRVLPEKVILEQDGDTLLVKRRDESRVARQ 63
Query: 188 LAAV-RTVCSHVENMIKGVTKGFHTR 262
L + RT+ V NM+ GV+KGF R
Sbjct: 64 LHGLSRTL---VANMVDGVSKGFEKR 86
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 34.7 bits (76), Expect = 1.6
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLK 100
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n=4;
cellular organisms|Rep: Chloroplast 50S ribosomal
protein L6 - Porphyra yezoensis
Length = 180
Score = 34.7 bits (76), Expect = 1.6
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 187
+ + + +P L+ + +TV GP+G L R +++ ++N + K G K
Sbjct: 4 IGKKIILLPTNLSTQFDGQTITVTGPKGTLSRTLP-AGINLEILNDTI--AVKTSGQTKM 60
Query: 188 LAAVRTVC-SHVENMIKGVTKGF 253
+ + + + + NMI+GV+ GF
Sbjct: 61 ASQLHGLSRTLISNMIEGVSNGF 83
>UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Rep:
Ribosomal protein L6 - Saprolegnia ferax
Length = 204
Score = 34.3 bits (75), Expect = 2.1
Identities = 19/80 (23%), Positives = 38/80 (47%)
Frame = +2
Query: 14 NQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 193
++K++IP + + +K + ++GP G + N H N LL +K+ +
Sbjct: 30 HEKIRIPKNINIVLKKNQLILQGPLGSIDLNIMHSLNYFIKNNNILLSFNSLHLKRKKKS 89
Query: 194 AVRTVCSHVENMIKGVTKGF 253
+ S ++ IKG+ +GF
Sbjct: 90 FLNLYKSLIKLKIKGILQGF 109
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 34.3 bits (75), Expect = 2.1
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 234 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRR 61
L +F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
Query: 60 DFT 52
F+
Sbjct: 82 CFS 84
>UniRef50_A5E3C0 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 384
Score = 33.9 bits (74), Expect = 2.8
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -2
Query: 387 SHTRCHLYPSDVFLTQEVTYLNN*ITLSGDTVNGEVSIHSTHL-VWKPLVTPLIMFSTCE 211
+HT H PS +T + I + GD + VS + +L +WK PLI+
Sbjct: 185 THTHTHTVPSTTNYLSPITPQEDSILIFGDFESDSVSHLNYNLTIWKEAAAPLIISGRLR 244
Query: 210 QTVLTAASSF-LDPN 169
V+ ++SF +D N
Sbjct: 245 AIVVECSNSFEIDEN 259
>UniRef50_O21255 Cluster: Mitochondrial 60S ribosomal protein L6;
n=1; Reclinomonas americana|Rep: Mitochondrial 60S
ribosomal protein L6 - Reclinomonas americana
Length = 185
Score = 33.5 bits (73), Expect = 3.7
Identities = 21/88 (23%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKW-FGSK 181
+ ++++KIP +++ + + V+G G L+ ++ + ++ + N + L ++ G+K
Sbjct: 4 IGSKQIKIPKNVSIDLSMNKIYVRGDLGKLELPLNNINIHLKNIENDQFLILDPINTGTK 63
Query: 182 KELAAV----RTVCSHVENMIKGVTKGF 253
K+ A T + +ENM+ GV+KG+
Sbjct: 64 KQKTASYIMWGTYRTLIENMLIGVSKGY 91
>UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
uncultured marine gamma proteobacterium EBAC20E09
Length = 182
Score = 33.1 bits (72), Expect = 4.9
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH-LAVDIRMVNPRLLKVEKWFGSKK 184
VA + IP+ + + + +V VKG +G L +++D V +++ ++ +++
Sbjct: 4 VAKNPITIPENVDLSINENVVIVKGSKGELDFVLPDTISLD---VADKVITIKYDEENQQ 60
Query: 185 ELAAVRTVCSHVENMIKGVTKGFHTRCVL 271
+A T S + NM+ GV++GF + L
Sbjct: 61 SVALAGTSRSLINNMVIGVSEGFEKKLEL 89
>UniRef50_Q7NEG7 Cluster: 50S ribosomal protein L6; n=19;
Bacteria|Rep: 50S ribosomal protein L6 - Gloeobacter
violaceus
Length = 191
Score = 33.1 bits (72), Expect = 4.9
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 23 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFG--SKKELAA 196
+ IP + V + R V VKGP+G L +V++ + RLL + ++++
Sbjct: 9 IAIPPKVEVTLDGRRVVVKGPKGTLDLTLPD-SVEVVREDGRLLVTRRGESRRAREQHGL 67
Query: 197 VRTVCSHVENMIKGVTKGF 253
RT+ V NM+ GVT GF
Sbjct: 68 GRTL---VANMVTGVTTGF 83
>UniRef50_A6DRC5 Cluster: 50S ribosomal protein L6; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L6 - Lentisphaera araneosa HTCC2155
Length = 181
Score = 32.7 bits (71), Expect = 6.5
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK---HLAVDIRMVNPRLLKVEKWFGS 178
+ N+ + I G+ V + + V+VKGP+G LK +VD + + + S
Sbjct: 4 IGNKAISITAGVEVKISGKEVSVKGPKGELKHTLTPRVEASVDADSNEVVVTRQDDSRFS 63
Query: 179 KKELAAVRTVCSHVENMIKGVTKGF 253
K E R++ + NMI GV+ G+
Sbjct: 64 KAEHGLNRSL---ISNMIVGVSTGW 85
>UniRef50_A0CCY6 Cluster: Chromosome undetermined scaffold_169,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_169,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1498
Score = 32.7 bits (71), Expect = 6.5
Identities = 29/98 (29%), Positives = 44/98 (44%)
Frame = -2
Query: 366 YPSDVFLTQEVTYLNN*ITLSGDTVNGEVSIHSTHLVWKPLVTPLIMFSTCEQTVLTAAS 187
YPSD QE+ N I +GD + I H VW+ VT L F T T + A
Sbjct: 505 YPSDPIFVQELAAGPNLIYNNGDDSQKDHVIVDIHTVWELNVTGL-TFPTV--TDVAYAD 561
Query: 186 SFLDPNHFSTFRRRGFTMRMSTAKCLKFLLRTPRGPLT 73
+DP H+S + F ++ + K ++ T + L+
Sbjct: 562 VLIDP-HWSGAHKFWFLYQLQSTKQIEIFECTTKTQLS 598
>UniRef50_P47412 Cluster: 50S ribosomal protein L6; n=6;
Mycoplasmataceae|Rep: 50S ribosomal protein L6 -
Mycoplasma genitalium
Length = 184
Score = 32.7 bits (71), Expect = 6.5
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +2
Query: 8 VANQKVKI-PDGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLKVEKWFGSK 181
+ N+ +KI P +++ + L+T+KGP G K+L + + N + KV K
Sbjct: 4 IGNRSIKIDPSKVSLMQTTTLLTIKGPLGENTIKLPKNLPLKFVVENDTI-KVTNNNNLK 62
Query: 182 KELAAVRTVCSHVENMIKGVTKGFHTRCVL 271
+ T + V N + GVTKGF + +L
Sbjct: 63 QTKILHGTFNALVNNAVIGVTKGFEKKLIL 92
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 32.3 bits (70), Expect = 8.6
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 23 VKIPDGLTVHVKSRLVTVKGPRGVLKRNF 109
+++PD +TV + +TVKGP+G L R F
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYF 37
>UniRef50_Q2IJ73 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 180
Score = 32.3 bits (70), Expect = 8.6
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 VANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKK 184
V VKIP+ + V V +V V+GP+G + L +V + ++ + ++ +K
Sbjct: 4 VGKMPVKIPEKVKVSVDGNVVKVEGPKGKMHFPTNPLVSVQVDKGEVKVARQDESHVAKG 63
Query: 185 ELAAVRTVCSHVENMIKGVTKGF 253
RT+ V+N ++GV KG+
Sbjct: 64 LHGLTRTL---VKNALEGVVKGY 83
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,774,309
Number of Sequences: 1657284
Number of extensions: 11729090
Number of successful extensions: 29432
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 28619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29369
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 40658285374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -