Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00991
(681 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 42 1e-04
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 41 2e-04
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 38 0.001
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 38 0.001
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 38 0.002
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 36 0.004
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 36 0.005
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 36 0.005
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 36 0.005
SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 2.5
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 3.3
SPBC14C8.16c |bot1||mitochondrial ribosomal protein subunit S35 ... 26 5.8
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 25 7.7
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 41.5 bits (93), Expect = 1e-04
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +3
Query: 261 FALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTICMV 440
+ + GE FP+ YR V+ L F+ P +++AIG Y +YA I
Sbjct: 388 WVIVGETFPIRYRSKCASVATSGNWLGNFMISFFTPFINNAIGFKLGY-IYACINLFSSF 446
Query: 441 VVWIMLPETKDKTLQEIEDRFRGTL 515
+++ + ETK TL+E+ D + +
Sbjct: 447 MIFFLAKETKGLTLEEVNDLYMSNI 471
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 40.7 bits (91), Expect = 2e-04
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +3
Query: 261 FALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTICMV 440
+ + GE FP+ YR V+ L F+ P +S++IG Y +YA I
Sbjct: 388 WVIVGETFPIRYRSKCAAVATSGNWLGNFMVSFFTPFISNSIGFKLGY-IYACINMTSAF 446
Query: 441 VVWIMLPETKDKTLQEIEDRFRGTL 515
+++M ETK TL+E+ + + +
Sbjct: 447 QIFLMAKETKGLTLEEVNELYESDI 471
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 38.3 bits (85), Expect = 0.001
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = +3
Query: 228 VFVNRGRVFIPFALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYF 407
+F N G F E+FP RG G+S +A F L+S IG +
Sbjct: 459 LFSNFGPNSTTFIYPAEVFPARVRGTAHGISAALGKCGAILASLLFNFLTSIIGYGNVMW 518
Query: 408 LYAGIVTICM---VVVWIMLPETKDKTLQEIE 494
++ G CM ++ ++LPETK + EI+
Sbjct: 519 IFCG----CMWGGILFTLLLPETKGRDADEID 546
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +3
Query: 261 FALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTICMV 440
+ + GE +P+ YR V+ L F+ P +S +IG + Y ++A
Sbjct: 388 YVIVGESYPIRYRSKCAAVATTGNWLWGFLITFFTPFISDSIGFKYGY-IFAACNLCAAC 446
Query: 441 VVWIMLPETKDKTLQEIEDRF 503
++++ ETK TL+EI + +
Sbjct: 447 IIFLFAHETKGLTLEEINELY 467
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 37.5 bits (83), Expect = 0.002
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = +3
Query: 228 VFVNRGRVFIPFALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYF 407
+F N G F E+FP RG GVS +A F L+ IG +
Sbjct: 458 LFSNFGPNSTTFIYPAEVFPARVRGTAHGVSAALGKCGAILASLLFNFLTGVIGYGNVMW 517
Query: 408 LYAGIVTICM---VVVWIMLPETKDKTLQEIE 494
++ G CM ++ ++LPETK + EI+
Sbjct: 518 IFCG----CMWGGILFTLLLPETKGRDADEID 545
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 36.3 bits (80), Expect = 0.004
Identities = 20/81 (24%), Positives = 40/81 (49%)
Frame = +3
Query: 261 FALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTICMV 440
+ + GE +P+ YR V+ L F+ P ++++IG + Y ++A
Sbjct: 388 YVIVGESYPIRYRSKCAAVATTGNWLWGFLISFFTPFITNSIGFKYGY-IFAACNLCAAC 446
Query: 441 VVWIMLPETKDKTLQEIEDRF 503
++++ ETK TL+EI + +
Sbjct: 447 IIFLFAHETKGLTLEEINELY 467
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 35.9 bits (79), Expect = 0.005
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +3
Query: 276 ELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTICMVVVWIM 455
ELFP+ RGLG G+S F L S I + T+ LY G+ + +
Sbjct: 469 ELFPMSVRGLGTGMSTAVNWAGNLGIGASFLTLMSEITPTGTFALYGGLCFLGWLGALFC 528
Query: 456 LPETKDKTLQEI 491
P+ D T++EI
Sbjct: 529 YPDLTDYTIEEI 540
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 35.9 bits (79), Expect = 0.005
Identities = 20/81 (24%), Positives = 41/81 (50%)
Frame = +3
Query: 261 FALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTICMV 440
+ + GE +P+ YR V+ + L F+ P ++++IG + Y ++A +
Sbjct: 388 YVIVGESYPIRYRSKCAAVATTSNWLWNFLISFFTPFITNSIGFKYGY-IFASCNLCASI 446
Query: 441 VVWIMLPETKDKTLQEIEDRF 503
V ++ E+K TL+EI + +
Sbjct: 447 VTFLFAHESKGLTLEEINELY 467
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 35.9 bits (79), Expect = 0.005
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +3
Query: 276 ELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTICMVVVWIM 455
ELFP++ R LG G S + I F + +I + T+ L+AG + +V +
Sbjct: 459 ELFPMEVRALGAGFSTAINWVGNLIISASFLTMMESITPTGTFALFAGFCFVGLVTSYFT 518
Query: 456 LPETKDKTLQEI 491
PE +++ I
Sbjct: 519 YPELAGMSIENI 530
>SPBC3B8.04c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 867
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 103 FSTTIICILAYISKGSYVYAKQAGILTYDSQWIPITLIGIYMFSLTVGVSSYHL 264
F T + IL GS + K++ + + S W P ++ + F++ +S YH+
Sbjct: 461 FMTVFLKILRD-ENGSPLSGKESTKVIFSSMWNPTIVLLLGGFTIAAALSKYHI 513
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 118 ICILAYISKGSYVYAKQAGILTYDSQWIPITL-IGIYMFSLTVGVSSYHLRYQG 276
I L YI++ Y+Y + + + P L IY+ L VS++ + YQG
Sbjct: 1072 IVTLIYITRVVYLYEDPLEKVDLEETFKPSLLNTAIYLLQLIQQVSTFAINYQG 1125
>SPBC14C8.16c |bot1||mitochondrial ribosomal protein subunit S35
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 315
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -3
Query: 634 IYKWRSIRIKSVQNMRATSTHHLPASIGRVERLRTLDILSSVPLNLSSISCRVLSLVSGN 455
I KW SI NMR +TH S + +++SS P + R++ L +GN
Sbjct: 240 ILKWPSIE---ELNMRQNATHFHKTSDEHKDLNEDEELISSSPSEVGKRVFRLIDLSTGN 296
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 25.4 bits (53), Expect = 7.7
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Frame = -3
Query: 643 LSLIYKWRSIRIKSVQNM------RATSTHHLPASIGRVERLRTLDILSSVPLNLSSISC 482
LS +WR R+ S +N R TST +S+ + + +SS+P SS+S
Sbjct: 84 LSTRKRWRQKRLWSFKNFPFRPPTRLTSTPSNSSSLPSIPSSSSTPSISSIPHTTSSVSN 143
Query: 481 RVLSLVSGN 455
+ S++ +
Sbjct: 144 DIPSVLGSS 152
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,881,806
Number of Sequences: 5004
Number of extensions: 62076
Number of successful extensions: 195
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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