Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00991
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 44 8e-05
U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical pr... 39 0.003
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 38 0.009
Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 36 0.027
AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical ... 34 0.11
AC006722-5|AAK68410.3| 703|Caenorhabditis elegans Hypothetical ... 33 0.25
AC006645-10|AAF39849.1| 746|Caenorhabditis elegans Hypothetical... 33 0.25
Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 31 0.76
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 28 5.4
Z72515-2|CAA96682.3| 329|Caenorhabditis elegans Hypothetical pr... 28 7.1
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 28 7.1
AL021503-3|CAA16423.1| 324|Caenorhabditis elegans Hypothetical ... 28 7.1
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 27 9.4
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Frame = +3
Query: 255 IPFALSGELFPLDYRGLGGGVS-YLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTI 431
IP+ ++ ELF +R VS ++A + F ++ P +G++F+YF + + +
Sbjct: 441 IPWIIASELFTQQFRATAVTVSVFVAWTFAFIVSTSYLP-FQQLVGITFSYFPFIIGLAV 499
Query: 432 CMVVVWIMLPETKDKTLQEIEDRFRGTLLRMSRVLSLST-RPMEAGR 569
+ ++++LPET+D+ + EI R SLS RP +A R
Sbjct: 500 FGIFIYVLLPETRDRPMVEIVTEVH------HRTASLSAGRPWDASR 540
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +3
Query: 255 IPFALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTIC 434
+P+ L+ E +PL R VS + I F LS A T+F+Y G +
Sbjct: 489 LPWVLNAEFYPLWARSTAVSVSTACNWIFNLIVSLTFLSLSQAATKYGTFFIYCGCTMVA 548
Query: 435 MVVVWIMLPETKDKTLQEIEDRF 503
+V V+ +PETK ++ E+E F
Sbjct: 549 LVFVFFFVPETKGYSIDEVEMLF 571
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/87 (26%), Positives = 44/87 (50%)
Frame = +3
Query: 243 GRVFIPFALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGI 422
G +P+ L+ E +P+ R +S + + I + L+ IG ++LYAG+
Sbjct: 481 GFTSLPWVLNSEFYPMWARSTCVAISTTSNWVFNLIIALTYLSLTQVIGKYGAFWLYAGL 540
Query: 423 VTICMVVVWIMLPETKDKTLQEIEDRF 503
I + + ++PETK +++E+E F
Sbjct: 541 TVIAFIFILFLVPETKGYSIEEVEMLF 567
>U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical
protein F48E3.2 protein.
Length = 488
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Frame = +3
Query: 255 IPFALSGELFPLDYRGLGGGVSYLALS--LNFFIAVKCFPVLSSAIGLSFT-YFLYAGIV 425
I + ++ EL P+++R + LAL+ + +A FP+ + ++ +F+ GI+
Sbjct: 382 IAWFITSELVPINFRAASQSL-VLALNHTVALVLAFLTFPLYKTIGPITLVIFFVIPGIL 440
Query: 426 TICMVVVWIMLPETKDKTLQEIEDRFRGTLLRMSRVLSLST 548
I M++++ LPETKDK + I ++ R T + L T
Sbjct: 441 CIIMLILY--LPETKDKHINVIVEQLRETKAKRKESQKLET 479
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/87 (25%), Positives = 42/87 (48%)
Frame = +3
Query: 243 GRVFIPFALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGI 422
G +P+ L+ E +P+ R +S L+ + I + L+ AI ++LYA
Sbjct: 489 GFTSLPWVLNSEFYPMWARSTCVSISTLSNWVFNLIIALTYLSLTHAITKYGAFWLYAIF 548
Query: 423 VTICMVVVWIMLPETKDKTLQEIEDRF 503
I + ++ ++PET ++ E+E F
Sbjct: 549 TIIAFIFIYFLVPETTGYSIDEVEMLF 575
>Z81099-3|CAB03186.3| 490|Caenorhabditis elegans Hypothetical
protein K08F9.1 protein.
Length = 490
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/82 (23%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 IPFALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYF-LYAGIVTI 431
+ + ++ EL D R + + ++ F + F + + +G +++Y L+ V +
Sbjct: 387 LSYFINAELVGQDARSAAQSWASVVQMISQFSIITAFLPMKNQLGEAWSYLILFVAPVAV 446
Query: 432 CMVVVWIMLPETKDKTLQEIED 497
+V ++ LPETK+K+ E+E+
Sbjct: 447 SLVFLYFSLPETKNKSPIEVEE 468
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 35.9 bits (79), Expect = 0.027
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = +3
Query: 255 IPFALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTIC 434
I + +S EL P +R + V+Y ++ I+ L S IG LY+ I
Sbjct: 387 ISWFISSELVPQKHRSIAQSVAYSMNTVMVVISTFTVLPLYSVIGSYAFLILYSIPSFIS 446
Query: 435 MVVVWIMLPETKDKTLQEIEDRFR 506
M++++ LPETK + + +I + +
Sbjct: 447 MLILFRYLPETKGREIHDIVNELK 470
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 35.9 bits (79), Expect = 0.027
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = +3
Query: 255 IPFALSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTIC 434
I + +S EL P +R + V+Y ++ I+ L S IG LY+ I
Sbjct: 387 ISWFISSELVPQKHRSIAQSVAYSMNTVMVVISTFTVLPLYSVIGSYAFLILYSIPSFIS 446
Query: 435 MVVVWIMLPETKDKTLQEIEDRFR 506
M++++ LPETK + + +I + +
Sbjct: 447 MLILFRYLPETKGREIHDIVNELK 470
>AF016656-3|AAB66037.2| 515|Caenorhabditis elegans Hypothetical
protein C35A11.4 protein.
Length = 515
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 336 LNFFIAVKCFPVLSSAIGLSFTYF-LYAGIVTICMVVVWIMLPETKDKTLQEIED 497
L+ F+ V F + + +G +++Y L+ V +V ++ LPETK+K E+E+
Sbjct: 414 LSRFVIVTAFLPMKNQLGEAWSYLILFVAPVAASLVYLYFSLPETKNKNPFEVEE 468
>AC006722-5|AAK68410.3| 703|Caenorhabditis elegans Hypothetical
protein Y19D10A.10 protein.
Length = 703
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 327 ALSLNFFIAVKCFPVL-SSAIGLSFTYFLYAGIVTICMVVVWIMLPETKDKTLQEIEDRF 503
AL L+ I + +L SA+G Y+L+ G+ I +V WI + D + +
Sbjct: 426 ALQLSNIICMPVSGLLCESALGWRSIYYLFGGLTFIMFIVFWISYKD--DPKMYRKRNLK 483
Query: 504 RGTLLRMSRVLSLSTRP 554
+ ++SR L++ T P
Sbjct: 484 KSPAAKLSRYLAICTDP 500
>AC006645-10|AAF39849.1| 746|Caenorhabditis elegans Hypothetical
protein F56A4.11 protein.
Length = 746
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 327 ALSLNFFIAVKCFPVL-SSAIGLSFTYFLYAGIVTICMVVVWIMLPETKDKTLQEIEDRF 503
AL L+ I + +L SA+G Y+L+ G+ I +V WI + D + +
Sbjct: 469 ALQLSNIICMPVSGLLCESALGWRSIYYLFGGLTFIMFIVFWISYKD--DPKMYRKRNLK 526
Query: 504 RGTLLRMSRVLSLSTRP 554
+ ++SR L++ T P
Sbjct: 527 KSPAAKLSRYLAICTDP 543
>Z99270-1|CAB16470.4| 500|Caenorhabditis elegans Hypothetical
protein Y37A1A.3 protein.
Length = 500
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/86 (20%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Frame = +3
Query: 267 LSGELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGI-VTICMVV 443
++GEL P + R + +++ F+ + + + + Y ++ + + + ++V
Sbjct: 415 ITGELVPQNCRSASSVWTNAVMAVVRFLILTFYLPVKNMTSEFMAYAIFFVVPMIVAVLV 474
Query: 444 VWIMLPETKDKTLQEIEDRF-RGTLL 518
++ +LPETK + ++EI + + R +LL
Sbjct: 475 IFFLLPETKGRNVEEIREEYERKSLL 500
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = +3
Query: 276 ELFPLDYRGLGGGVSYLALSLNFFIAVKCFPVLSSAIGLSFTYFLYAGIVTICMVVVWIM 455
EL P D R + G + + + + +A P+ L F + I T +++VW
Sbjct: 412 ELMPTDVRTISGALMNILMKIGTILASTTKPIKFWYEPLLF--IINTIICTGGLIIVWKY 469
Query: 456 LPETKDKTLQ 485
LPE+K+ +Q
Sbjct: 470 LPESKNMNMQ 479
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/38 (36%), Positives = 26/38 (68%)
Frame = +1
Query: 175 ILTYDSQWIPITLIGIYMFSLTVGVSSYHLRYQGSFSR 288
+L ++ Q +T+ I++ ++TVGV+ + +YQGS SR
Sbjct: 36 VLFFNMQCSFLTIF-IFITTVTVGVAEFSEQYQGSSSR 72
>Z72515-2|CAA96682.3| 329|Caenorhabditis elegans Hypothetical
protein T11A5.2 protein.
Length = 329
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 1 ANSNFLMVALDIERLICNL-IAIYLMKTLK 87
+NSNFL V+L I +IC L + ++L+ T K
Sbjct: 13 SNSNFLRVSLGINLIICILGLPVFLVYTWK 42
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 189 QPMDSNHFNWHIYVFVNRGRVFIPFALSGE-LFPLDY 296
QPM+ N F WH + G F G +FP DY
Sbjct: 32 QPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADY 68
>AL021503-3|CAA16423.1| 324|Caenorhabditis elegans Hypothetical
protein Y68A4A.6 protein.
Length = 324
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Frame = +3
Query: 315 VSYLALSLNFFI------AVKCFPVLSSAIGL-SFTYFLYAGIVTICMVVVWI 452
+SYL L + F++ K P+L L +YFL+ GI+ I +++WI
Sbjct: 28 ISYLTLPIYFYVHKMNRHQEKDLPILQLFHKLVKMSYFLFFGIIFILGLILWI 80
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 402 YFLYAGIVTICMVVVWIML 458
+FL GIVT+C + WI++
Sbjct: 412 WFLTCGIVTVCNTMYWILI 430
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 402 YFLYAGIVTICMVVVWIML 458
+FL GIVT+C + WI++
Sbjct: 412 WFLTCGIVTVCNTMYWILI 430
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,845,015
Number of Sequences: 27780
Number of extensions: 343918
Number of successful extensions: 840
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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