BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00989 (723 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY645023-1|AAT92559.1| 99|Anopheles gambiae wingless protein. 26 1.0 AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsiv... 24 4.1 AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 24 5.5 AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein. 23 7.2 U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 23 9.6 U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 23 9.6 U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 23 9.6 CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 23 9.6 >AY645023-1|AAT92559.1| 99|Anopheles gambiae wingless protein. Length = 99 Score = 26.2 bits (55), Expect = 1.0 Identities = 10/33 (30%), Positives = 17/33 (51%) Frame = -1 Query: 303 PNPESCPKLPNPESRPSHRTQSHDRNYRIQGCD 205 P+P C + P + +H Q +D + + GCD Sbjct: 23 PSPGFCERNPRLGIQGTHGRQCNDTSIGVDGCD 55 >AY496421-1|AAS80138.1| 439|Anopheles gambiae bacteria responsive protein 2 protein. Length = 439 Score = 24.2 bits (50), Expect = 4.1 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 Query: 274 ESGVTSKPPNPESRPKLSNPG 212 +SG+T PP P P SNPG Sbjct: 308 DSGITGVPPLPADGP--SNPG 326 >AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcription factor protein. Length = 593 Score = 23.8 bits (49), Expect = 5.5 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 5/41 (12%) Frame = -2 Query: 575 PPNEVAMPSRPFSILSS-----SIPWSVNWKYPLRVRHCLC 468 PP P +P+S+++S +P N R++HC C Sbjct: 376 PPPPPYQPPQPYSLMASVAPSYGLPQQQNQCPIHRIQHCTC 416 >AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein. Length = 471 Score = 23.4 bits (48), Expect = 7.2 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%) Frame = -1 Query: 474 SLPKLS-SAESPKLPNPESWCPNPESW 397 S+ KL S S +P P + C +P +W Sbjct: 445 SVAKLPISCSSNSIPPPSNHCSSPSTW 471 >U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. Length = 376 Score = 23.0 bits (47), Expect = 9.6 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 Query: 95 YSFDFTASINIATAMREGLCY 33 YSF TA I ++E LCY Sbjct: 199 YSFTTTAEREIVRDIKEKLCY 219 >U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. Length = 376 Score = 23.0 bits (47), Expect = 9.6 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 Query: 95 YSFDFTASINIATAMREGLCY 33 YSF TA I ++E LCY Sbjct: 199 YSFTTTAEREIVRDIKEKLCY 219 >U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. Length = 376 Score = 23.0 bits (47), Expect = 9.6 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 Query: 95 YSFDFTASINIATAMREGLCY 33 YSF TA I ++E LCY Sbjct: 199 YSFTTTAEREIVRDIKEKLCY 219 >CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. Length = 376 Score = 23.0 bits (47), Expect = 9.6 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -2 Query: 95 YSFDFTASINIATAMREGLCY 33 YSF TA I ++E LCY Sbjct: 199 YSFTTTAEREIVRDIKEKLCY 219 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 664,031 Number of Sequences: 2352 Number of extensions: 14879 Number of successful extensions: 43 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 43 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 73597131 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -