Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00987
(454 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18621 Cluster: 60S ribosomal protein L17; n=135; Eukar... 146 3e-34
UniRef50_Q9BL19 Cluster: Ribosomal protein, large subunit protei... 132 3e-30
UniRef50_Q7RR03 Cluster: Ribosomal protein L22; n=1; Plasmodium ... 120 2e-26
UniRef50_Q5DHE6 Cluster: SJCHGC09296 protein; n=5; Bilateria|Rep... 118 6e-26
UniRef50_Q8IDI5 Cluster: Ribosomal protein L17, putative; n=5; P... 115 4e-25
UniRef50_Q93VI3 Cluster: 60S ribosomal protein L17-1; n=18; Euka... 115 4e-25
UniRef50_A7QP86 Cluster: Chromosome chr1 scaffold_136, whole gen... 115 5e-25
UniRef50_O48557 Cluster: 60S ribosomal protein L17; n=53; Eukary... 113 2e-24
UniRef50_Q5CVN1 Cluster: 60S ribosomal protein L17; n=9; Eukaryo... 111 7e-24
UniRef50_Q8WTK4 Cluster: Ribosomal protein, large subunit protei... 107 8e-23
UniRef50_P05740 Cluster: 60S ribosomal protein L17-A; n=27; Euka... 103 2e-21
UniRef50_O14339 Cluster: 60S ribosomal protein L17-A; n=4; Dikar... 101 5e-21
UniRef50_Q7TPJ7 Cluster: Ac2-210; n=3; Eutheria|Rep: Ac2-210 - R... 101 1e-20
UniRef50_A1XED3 Cluster: RPL17; n=14; Eutheria|Rep: RPL17 - Bos ... 93 3e-18
UniRef50_A4D1R6 Cluster: Similar to 60S ribosomal protein L17; n... 85 9e-16
UniRef50_A4D1R5 Cluster: Similar to Ubiquinol-cytochrome C reduc... 85 9e-16
UniRef50_Q8SRH7 Cluster: 60S RIBOSOMAL PROTEIN L17; n=1; Encepha... 81 1e-14
UniRef50_UPI00015601D6 Cluster: PREDICTED: hypothetical protein;... 80 3e-14
UniRef50_Q7QWE4 Cluster: GLP_336_28895_29389; n=1; Giardia lambl... 80 3e-14
UniRef50_Q98S09 Cluster: 60S ribosomal protein L17; n=1; Guillar... 75 7e-13
UniRef50_Q6ZNV0 Cluster: CDNA FLJ27083 fis, clone SPL03425; n=2;... 75 9e-13
UniRef50_A7PPU4 Cluster: Chromosome chr18 scaffold_24, whole gen... 71 1e-11
UniRef50_A2DM53 Cluster: Ribosomal protein L22, putative; n=1; T... 66 4e-10
UniRef50_Q8TX36 Cluster: 50S ribosomal protein L22P; n=7; Archae... 56 3e-07
UniRef50_Q9YF76 Cluster: 50S ribosomal protein L22P; n=2; Desulf... 54 1e-06
UniRef50_UPI0001553410 Cluster: PREDICTED: hypothetical protein;... 53 3e-06
UniRef50_Q9UXA2 Cluster: 50S ribosomal protein L22P; n=5; Thermo... 53 3e-06
UniRef50_A0RVX8 Cluster: Ribosomal protein L22; n=2; Thermoprote... 52 6e-06
UniRef50_O28359 Cluster: 50S ribosomal protein L22P; n=6; Euryar... 51 1e-05
UniRef50_A5AXX3 Cluster: Putative uncharacterized protein; n=1; ... 51 1e-05
UniRef50_Q9V1U0 Cluster: 50S ribosomal protein L22P; n=6; Euryar... 50 2e-05
UniRef50_Q0W1Y4 Cluster: 50S ribosomal protein L22P; n=4; Archae... 50 3e-05
UniRef50_P15008 Cluster: 50S ribosomal protein L22P; n=6; Haloba... 49 5e-05
UniRef50_Q9HIR4 Cluster: 50S ribosomal protein L22P; n=5; Thermo... 47 2e-04
UniRef50_UPI0000056230 Cluster: ribosomal protein L22; n=1; Aqui... 45 9e-04
UniRef50_Q6F1Y9 Cluster: 50S ribosomal protein L22; n=2; Firmicu... 45 9e-04
UniRef50_O66436 Cluster: 50S ribosomal protein L22; n=3; Aquifex... 45 9e-04
UniRef50_O85387 Cluster: 50S ribosomal protein L22; n=179; Bacte... 44 0.002
UniRef50_O83224 Cluster: 50S ribosomal protein L22; n=1; Trepone... 43 0.003
UniRef50_Q68W83 Cluster: 50S ribosomal protein L22; n=11; Alphap... 42 0.008
UniRef50_Q8XV17 Cluster: 50S ribosomal protein L22; n=30; Bacter... 42 0.008
UniRef50_Q2QAS6 Cluster: Ribosomal protein L22; n=2; environment... 41 0.011
UniRef50_Q5L418 Cluster: 50S ribosomal protein L22; n=11; Firmic... 41 0.014
UniRef50_P62650 Cluster: 50S ribosomal protein L22P; n=1; Nanoar... 40 0.019
UniRef50_Q92GX1 Cluster: 50S ribosomal protein L22; n=19; Alphap... 39 0.058
UniRef50_Q2FT36 Cluster: 50S ribosomal protein L22P; n=4; Methan... 38 0.076
UniRef50_A0CDD8 Cluster: Chromosome undetermined scaffold_17, wh... 38 0.13
UniRef50_P56795 Cluster: Chloroplast 50S ribosomal protein L22; ... 37 0.18
UniRef50_A7M935 Cluster: Ribosomal protein L22; n=1; Cuscuta gro... 37 0.23
UniRef50_Q7QWE5 Cluster: GLP_336_29458_28835; n=1; Giardia lambl... 36 0.31
UniRef50_Q3LVW9 Cluster: Ribosomal protein L17; n=1; Bigelowiell... 36 0.41
UniRef50_Q8ZWH7 Cluster: 50S ribosomal protein L22P; n=6; Thermo... 36 0.41
UniRef50_Q01BQ9 Cluster: 50S ribosomal protein L22-like; n=2; Os... 35 0.71
UniRef50_Q06GV7 Cluster: Chloroplast 50S ribosomal protein L22; ... 35 0.71
UniRef50_A6GCH4 Cluster: 50S ribosomal protein L22; n=1; Plesioc... 35 0.94
UniRef50_P23408 Cluster: 50S ribosomal protein L22, chloroplast ... 35 0.94
UniRef50_Q0EW41 Cluster: Ribosomal protein L22; n=1; Mariprofund... 33 2.2
UniRef50_Q1ISB7 Cluster: Ribosomal protein L22; n=1; Acidobacter... 33 2.9
UniRef50_UPI0000F1E090 Cluster: PREDICTED: hypothetical protein;... 33 3.8
UniRef50_Q4SXP1 Cluster: Chromosome 6 SCAF12355, whole genome sh... 33 3.8
UniRef50_Q6CXQ5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 32 5.0
UniRef50_P53327 Cluster: Antiviral helicase SLH1; n=11; Saccharo... 32 5.0
UniRef50_O46899 Cluster: Chloroplast 50S ribosomal protein L22; ... 32 5.0
UniRef50_Q2IJ81 Cluster: 50S ribosomal protein L22; n=4; Cystoba... 32 6.6
UniRef50_Q89GY5 Cluster: Blr6210 protein; n=2; Bradyrhizobiaceae... 31 8.7
UniRef50_A0YAE7 Cluster: Putative uncharacterized protein; n=1; ... 31 8.7
UniRef50_Q0W8I5 Cluster: Putative uncharacterized protein; n=1; ... 31 8.7
>UniRef50_P18621 Cluster: 60S ribosomal protein L17; n=135;
Eukaryota|Rep: 60S ribosomal protein L17 - Homo sapiens
(Human)
Length = 184
Score = 146 bits (353), Expect = 3e-34
Identities = 63/84 (75%), Positives = 75/84 (89%)
Frame = +2
Query: 2 PDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 181
P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGGV
Sbjct: 8 PENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGV 67
Query: 182 GRCAQAKQFGTTQGRWPKKSAEFL 253
GRCAQAKQ+G TQGRWPKKSAEFL
Sbjct: 68 GRCAQAKQWGWTQGRWPKKSAEFL 91
Score = 108 bits (260), Expect = 5e-23
Identities = 52/88 (59%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
Frame = +1
Query: 190 CSSKAVWHNT-GSLAQEIRRIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRT 366
C+ W T G ++ L +L+NA+SNA+ K LDVD LVI+HIQVN+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 367 YRAHGRINPYMSSPCHIEVCLSEREDAV 450
YRAHGRINPYMSSPCHIE+ L+E+E V
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIV 157
>UniRef50_Q9BL19 Cluster: Ribosomal protein, large subunit protein
17, isoform a; n=5; Eukaryota|Rep: Ribosomal protein,
large subunit protein 17, isoform a - Caenorhabditis
elegans
Length = 187
Score = 132 bits (320), Expect = 3e-30
Identities = 59/84 (70%), Positives = 70/84 (83%)
Frame = +2
Query: 2 PDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 181
P+N KSCKARGS+LRVHFKNT+E AMA+R MPLRRA +L +V E KE +PFRRF+GG+
Sbjct: 10 PENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRFHGGI 69
Query: 182 GRCAQAKQFGTTQGRWPKKSAEFL 253
GR AQ KQ+ TTQGRWP KSA+FL
Sbjct: 70 GRAAQTKQWNTTQGRWPVKSADFL 93
Score = 107 bits (258), Expect = 8e-23
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +1
Query: 253 LQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 432
L LL+NA+SNA+ K LDVD LVI+HI V RA LRRRTYRAHGRINPYMSSPCHIEV L+
Sbjct: 94 LDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINPYMSSPCHIEVILA 153
Query: 433 EREDAVA 453
E+ED V+
Sbjct: 154 EKEDVVS 160
>UniRef50_Q7RR03 Cluster: Ribosomal protein L22; n=1; Plasmodium
yoelii yoelii|Rep: Ribosomal protein L22 - Plasmodium
yoelii yoelii
Length = 249
Score = 120 bits (288), Expect = 2e-26
Identities = 55/82 (67%), Positives = 62/82 (75%)
Frame = +2
Query: 8 NPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGR 187
NP K KA +LRVHFKNTYETA AIR+M L A +YL VIEKK C+PFRR+NGGVGR
Sbjct: 10 NPGKCAKAAAVDLRVHFKNTYETARAIRRMNLLEAKKYLNAVIEKKRCVPFRRYNGGVGR 69
Query: 188 CAQAKQFGTTQGRWPKKSAEFL 253
QAK+F TQGRWP KS +FL
Sbjct: 70 TNQAKEFNHTQGRWPVKSCKFL 91
Score = 74.5 bits (175), Expect = 9e-13
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = +1
Query: 268 NADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSE 435
N +SN +K LDV +L I HI VNRA RRRT++AHGRINP+MSSPCHI+V E
Sbjct: 148 NNNSNNKSKNLDVGKLKIIHIMVNRARPGRRRTFKAHGRINPFMSSPCHIQVIARE 203
>UniRef50_Q5DHE6 Cluster: SJCHGC09296 protein; n=5; Bilateria|Rep:
SJCHGC09296 protein - Schistosoma japonicum (Blood
fluke)
Length = 193
Score = 118 bits (284), Expect = 6e-26
Identities = 56/83 (67%), Positives = 66/83 (79%)
Frame = +2
Query: 5 DNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVG 184
++ +K+CKAR LR HFKN +E A A++ M L+RA YLKNVIEKKE IPFRRFNGGVG
Sbjct: 11 EDESKTCKARIPYLRTHFKNMHECACAVKGMTLQRAQTYLKNVIEKKEIIPFRRFNGGVG 70
Query: 185 RCAQAKQFGTTQGRWPKKSAEFL 253
R AQAK + TTQGRWPKKSA+ L
Sbjct: 71 RHAQAKVWKTTQGRWPKKSAQML 93
Score = 92.3 bits (219), Expect = 4e-18
Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 4/86 (4%)
Frame = +1
Query: 205 VWHNT-GSLAQEIRRIPLQLLRNADSNA---DNKTLDVDRLVIDHIQVNRAPCLRRRTYR 372
VW T G ++ ++ LQLL NA SN D K + RL I HIQVN+AP +RRRTYR
Sbjct: 77 VWKTTQGRWPKKSAQMLLQLLHNAFSNGVYKDIKGGEASRLFIKHIQVNQAPKMRRRTYR 136
Query: 373 AHGRINPYMSSPCHIEVCLSEREDAV 450
AHGRINPYM SPCH+EV L+ ++D V
Sbjct: 137 AHGRINPYMCSPCHVEVILATKDDIV 162
>UniRef50_Q8IDI5 Cluster: Ribosomal protein L17, putative; n=5;
Plasmodium|Rep: Ribosomal protein L17, putative -
Plasmodium falciparum (isolate 3D7)
Length = 203
Score = 115 bits (277), Expect = 4e-25
Identities = 52/82 (63%), Positives = 61/82 (74%)
Frame = +2
Query: 8 NPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGR 187
N K K G +LRVHFKNTYE A AIR+M L A +YL +VIEKK C+PFR++NGGVGR
Sbjct: 10 NLGKCAKGAGVDLRVHFKNTYEAARAIRRMKLLEAKKYLNDVIEKKRCVPFRKYNGGVGR 69
Query: 188 CAQAKQFGTTQGRWPKKSAEFL 253
QAK+F TQGRWP KS +FL
Sbjct: 70 TNQAKEFNHTQGRWPAKSCKFL 91
Score = 79.4 bits (187), Expect = 3e-14
Identities = 35/75 (46%), Positives = 50/75 (66%)
Frame = +1
Query: 211 HNTGSLAQEIRRIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRIN 390
H G + + L +L N +NA+++ LDV +L + H+ VN+A RRRTY+AHGRIN
Sbjct: 78 HTQGRWPAKSCKFLLNILDNVQANAESRNLDVSKLRLIHVMVNKARPGRRRTYKAHGRIN 137
Query: 391 PYMSSPCHIEVCLSE 435
P+MSSPCHI++ E
Sbjct: 138 PFMSSPCHIQIIARE 152
>UniRef50_Q93VI3 Cluster: 60S ribosomal protein L17-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L17-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 176
Score = 115 bits (277), Expect = 4e-25
Identities = 56/85 (65%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 PDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 181
PDN KSCKARG++LRVHFKNT ETA AIRK+PL +A RYL++VI K+ IPF RF GV
Sbjct: 8 PDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPFTRFCRGV 67
Query: 182 GRCAQAK-QFGTTQGRWPKKSAEFL 253
GR AQAK + QGRWP KSA+F+
Sbjct: 68 GRTAQAKNRHSNGQGRWPAKSAQFV 92
Score = 101 bits (241), Expect = 1e-20
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +1
Query: 253 LQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 432
L LL+NA+SNA+ K LDVD L I HIQVN+A RRRTYRAHGRINPYMS+PCHIE+ LS
Sbjct: 93 LDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILS 152
Query: 433 EREDAV 450
E+E+ V
Sbjct: 153 EKEEPV 158
>UniRef50_A7QP86 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 261
Score = 115 bits (276), Expect = 5e-25
Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 PDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 181
PDNP KSCKARG +LRVHFKNT ETA AIRK+PL +A RYL++V+ K+ IPF RF GV
Sbjct: 86 PDNPTKSCKARGLDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLVHKQAIPFTRFCRGV 145
Query: 182 GRCAQAK-QFGTTQGRWPKKSAEFL 253
GR AQAK + QGRWP KSA+++
Sbjct: 146 GRTAQAKNRHSNGQGRWPVKSAKYI 170
Score = 103 bits (248), Expect = 1e-21
Identities = 49/66 (74%), Positives = 55/66 (83%)
Frame = +1
Query: 253 LQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 432
L LL+NA+SNAD K LDVD L I HIQVN+A RRRTYRAHGRINPYMSSPCHIE+ LS
Sbjct: 171 LDLLKNAESNADLKGLDVDSLYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILS 230
Query: 433 EREDAV 450
E+E+ V
Sbjct: 231 EKEEPV 236
>UniRef50_O48557 Cluster: 60S ribosomal protein L17; n=53;
Eukaryota|Rep: 60S ribosomal protein L17 - Zea mays
(Maize)
Length = 171
Score = 113 bits (271), Expect = 2e-24
Identities = 54/85 (63%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 PDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 181
P NP KS KA G +LRVHFKNT ETA A+RK+PL +A RYL++VI K+ IPFRR+ GGV
Sbjct: 8 PGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFRRYCGGV 67
Query: 182 GRCAQAK-QFGTTQGRWPKKSAEFL 253
GR AQAK + QGRWP KSA F+
Sbjct: 68 GRTAQAKSRHSNGQGRWPVKSARFI 92
Score = 104 bits (250), Expect = 8e-22
Identities = 49/69 (71%), Positives = 56/69 (81%)
Frame = +1
Query: 244 RIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEV 423
R L LL+NA+SNAD K LDVD L + HIQVN+A RRRTYRAHGRINPYMSSPCHIE+
Sbjct: 90 RFILDLLKNAESNADVKGLDVDNLYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 149
Query: 424 CLSEREDAV 450
LSE+E+ V
Sbjct: 150 ILSEKEEPV 158
>UniRef50_Q5CVN1 Cluster: 60S ribosomal protein L17; n=9;
Eukaryota|Rep: 60S ribosomal protein L17 -
Cryptosporidium parvum Iowa II
Length = 187
Score = 111 bits (267), Expect = 7e-24
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +2
Query: 2 PDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 181
PD P+KS +GS+LRV +KNTYETA AI+ M L A +YL +VI KK C+PFRRFNGGV
Sbjct: 8 PDTPSKSVMCKGSDLRVSYKNTYETATAIKGMYLLDARQYLLDVIAKKRCVPFRRFNGGV 67
Query: 182 GRCAQAKQFGTTQGRWPKKSAEFL 253
GR A+A +F TQGR+P+KS FL
Sbjct: 68 GRTAKANEFKLTQGRFPEKSCRFL 91
Score = 79.0 bits (186), Expect = 4e-14
Identities = 38/77 (49%), Positives = 50/77 (64%)
Frame = +1
Query: 220 GSLAQEIRRIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYM 399
G ++ R L LL+NA+SN D K LDVDRL++ V AP RRRT+RAHGRI P+
Sbjct: 81 GRFPEKSCRFLLDLLQNAESNCDMKGLDVDRLMLVSAVVTHAPFNRRRTFRAHGRITPFK 140
Query: 400 SSPCHIEVCLSEREDAV 450
S PC+I++ E +D V
Sbjct: 141 SQPCNIQLIFKEIDDTV 157
>UniRef50_Q8WTK4 Cluster: Ribosomal protein, large subunit protein
17, isoform b; n=48; Bilateria|Rep: Ribosomal protein,
large subunit protein 17, isoform b - Caenorhabditis
elegans
Length = 159
Score = 107 bits (258), Expect = 8e-23
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +1
Query: 253 LQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 432
L LL+NA+SNA+ K LDVD LVI+HI V RA LRRRTYRAHGRINPYMSSPCHIEV L+
Sbjct: 66 LDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINPYMSSPCHIEVILA 125
Query: 433 EREDAVA 453
E+ED V+
Sbjct: 126 EKEDVVS 132
Score = 87.0 bits (206), Expect = 2e-16
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = +2
Query: 2 PDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRF 169
P+N KSCKARGS+LRVHFKNT+E AMA+R MPLRRA +L +V E KE +PFRRF
Sbjct: 10 PENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRF 65
>UniRef50_P05740 Cluster: 60S ribosomal protein L17-A; n=27;
Eukaryota|Rep: 60S ribosomal protein L17-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 184
Score = 103 bits (247), Expect = 2e-21
Identities = 47/82 (57%), Positives = 58/82 (70%)
Frame = +2
Query: 8 NPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGR 187
NPAKS ARGS LRV FKNT ETA AI L +A +YL+ V++ + IPFRRFN +GR
Sbjct: 10 NPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGR 69
Query: 188 CAQAKQFGTTQGRWPKKSAEFL 253
AQ K+FG T+ RWP KS +F+
Sbjct: 70 TAQGKEFGVTKARWPAKSVKFV 91
Score = 88.6 bits (210), Expect = 5e-17
Identities = 41/65 (63%), Positives = 52/65 (80%)
Frame = +1
Query: 259 LLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSER 438
LL+NA +NA+ K LD +L + HIQVN+AP RRRTYRAHGRIN Y SSP HIE+ ++E+
Sbjct: 94 LLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEK 153
Query: 439 EDAVA 453
E+AVA
Sbjct: 154 EEAVA 158
>UniRef50_O14339 Cluster: 60S ribosomal protein L17-A; n=4;
Dikarya|Rep: 60S ribosomal protein L17-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 187
Score = 101 bits (243), Expect = 5e-21
Identities = 47/83 (56%), Positives = 56/83 (67%)
Frame = +2
Query: 2 PDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 181
P K KARG+ LR HFKN+ E A I M L++A +L NV E K+ +PFRRFNGGV
Sbjct: 8 PALETKCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPFRRFNGGV 67
Query: 182 GRCAQAKQFGTTQGRWPKKSAEF 250
GR AQ K+FG TQ RWP KS +F
Sbjct: 68 GRTAQGKEFGVTQARWPVKSVKF 90
Score = 91.5 bits (217), Expect = 8e-18
Identities = 39/64 (60%), Positives = 53/64 (82%)
Frame = +1
Query: 259 LLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSER 438
LL+NA++NA+ K LD+D+L+I H+QVN AP RRRTYRAHGR+ Y+SSP HIE+ ++E
Sbjct: 94 LLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVAEE 153
Query: 439 EDAV 450
E+AV
Sbjct: 154 EEAV 157
>UniRef50_Q7TPJ7 Cluster: Ac2-210; n=3; Eutheria|Rep: Ac2-210 -
Rattus norvegicus (Rat)
Length = 220
Score = 101 bits (241), Expect = 1e-20
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = +2
Query: 2 PDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 181
P+NP KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V KK+C+PFRR+NGGV
Sbjct: 8 PENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGV 67
Query: 182 GRCAQAK 202
A+ K
Sbjct: 68 ESNAELK 74
Score = 91.9 bits (218), Expect = 6e-18
Identities = 42/59 (71%), Positives = 50/59 (84%)
Frame = +1
Query: 274 DSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAV 450
+SNA+ K LD D LVI+HIQVN+AP +RRRTYRAHGRIN YMSSPCHIE+ L+E+E V
Sbjct: 68 ESNAELKGLDGDSLVIEHIQVNKAPKMRRRTYRAHGRINLYMSSPCHIEMILTEKEQIV 126
>UniRef50_A1XED3 Cluster: RPL17; n=14; Eutheria|Rep: RPL17 - Bos
taurus (Bovine)
Length = 86
Score = 92.7 bits (220), Expect = 3e-18
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +1
Query: 292 KTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAV 450
K LDVD LVI+HIQVN+AP +RRRTYRAHGRINPYMSSPCHIE+ L+E+E V
Sbjct: 1 KGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIV 53
>UniRef50_A4D1R6 Cluster: Similar to 60S ribosomal protein L17;
n=11; Eutheria|Rep: Similar to 60S ribosomal protein L17
- Homo sapiens (Human)
Length = 102
Score = 84.6 bits (200), Expect = 9e-16
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +1
Query: 271 ADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAV 450
A+SNA+ K LDVD LVI+HIQVN+AP +RRR RA+GRI P MSSPCHIE+ L+E+E V
Sbjct: 19 AESNAELKGLDVDSLVIEHIQVNKAPKMRRRIDRAYGRIYPCMSSPCHIEMILTEKEQIV 78
>UniRef50_A4D1R5 Cluster: Similar to Ubiquinol-cytochrome C
reductase iron-sulfur subunit, mitochondrial; n=1; Homo
sapiens|Rep: Similar to Ubiquinol-cytochrome C reductase
iron-sulfur subunit, mitochondrial - Homo sapiens
(Human)
Length = 282
Score = 84.6 bits (200), Expect = 9e-16
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +1
Query: 271 ADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAV 450
A+SNA+ K LDVD LVI+HIQVN+AP +RRR RA+GRI P MSSPCHIE+ L+E+E V
Sbjct: 19 AESNAELKGLDVDSLVIEHIQVNKAPKMRRRIDRAYGRIYPCMSSPCHIEMILTEKEQIV 78
>UniRef50_Q8SRH7 Cluster: 60S RIBOSOMAL PROTEIN L17; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L17
- Encephalitozoon cuniculi
Length = 183
Score = 80.6 bits (190), Expect = 1e-14
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 20/104 (19%)
Frame = +2
Query: 8 NPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGR 187
+P+K+ KA+ N +V FK T E + +R+ + A++YLKNVI K EC+PFRR+N G G+
Sbjct: 11 DPSKAVKAKIDNAKVSFKKTREASCTLRRRKVLDAIQYLKNVIAKTECVPFRRYNRGCGQ 70
Query: 188 CAQAKQFG--------------------TTQGRWPKKSAEFLCS 259
QA++F T+GRWPKKSAEFL S
Sbjct: 71 THQARKFSIPRREIVKANGEKKIKKGHVQTRGRWPKKSAEFLIS 114
Score = 69.7 bits (163), Expect = 3e-11
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +1
Query: 253 LQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEV 423
+ +L N NA+ K LD LVI H+QV++AP + RT+RAHGR+NP+ SPCHI++
Sbjct: 113 ISVLENIKENAETKGLDPKDLVITHVQVSKAPKIFGRTFRAHGRVNPFNKSPCHIQM 169
>UniRef50_UPI00015601D6 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 191
Score = 79.8 bits (188), Expect = 3e-14
Identities = 46/84 (54%), Positives = 52/84 (61%)
Frame = +2
Query: 2 PDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 181
P+N KSCK+R SNL VHFKNT ET +LK V PF +NGGV
Sbjct: 19 PENLTKSCKSRSSNLHVHFKNTRETV-------------FLKRV-------PFCYYNGGV 58
Query: 182 GRCAQAKQFGTTQGRWPKKSAEFL 253
GRCAQAKQ G T+G WPK+SAEFL
Sbjct: 59 GRCAQAKQQGWTRGWWPKQSAEFL 82
Score = 27.1 bits (57), Expect(2) = 6.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 253 LQLLRNADSNADNKTLDVDRLVID 324
L L+NA+ NA+ K LD D LV++
Sbjct: 83 LHELKNAEGNAELKGLDTDSLVLN 106
Score = 23.8 bits (49), Expect(2) = 6.1
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 403 SPCHIEVCLSERE 441
SPCH E+ L+E+E
Sbjct: 109 SPCHTEMILTEKE 121
>UniRef50_Q7QWE4 Cluster: GLP_336_28895_29389; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_28895_29389 - Giardia lamblia
ATCC 50803
Length = 164
Score = 79.8 bits (188), Expect = 3e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +2
Query: 26 KARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQ 205
K+R ++ FKNTY T AI+ M ++RA YL NV+ KE +PF +F GVGR +QA+
Sbjct: 15 KSRRDGVKASFKNTYSTCRAIKGMGVKRAFAYLDNVLNHKEIVPFFKFYKGVGRHSQARG 74
Query: 206 FGTTQGRWPKKS 241
GT +GRWP+KS
Sbjct: 75 SGTDKGRWPEKS 86
Score = 53.2 bits (122), Expect = 3e-06
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +1
Query: 259 LLRNADSNADNK-TLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSE 435
+L+ A SNA + + D L + VNRA RRRT+RAHGRI+ Y S PCH+E+ +
Sbjct: 93 ILKQAVSNAKHAHKKEEDELYVISYCVNRARGRRRRTFRAHGRISKYESQPCHVELIVGP 152
Query: 436 R 438
+
Sbjct: 153 K 153
>UniRef50_Q98S09 Cluster: 60S ribosomal protein L17; n=1; Guillardia
theta|Rep: 60S ribosomal protein L17 - Guillardia theta
(Cryptomonas phi)
Length = 153
Score = 74.9 bits (176), Expect = 7e-13
Identities = 36/73 (49%), Positives = 45/73 (61%)
Frame = +2
Query: 41 NLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQ 220
N +VH KNT E I M L RA +LKNVI KKE +PF+ + G+GR +Q Q
Sbjct: 14 NQKVHLKNTREVGCCIIGMTLGRAENFLKNVILKKEIVPFKVYRYGIGRKSQVNQSKNIS 73
Query: 221 GRWPKKSAEFLCS 259
GRWPKKSA+ + S
Sbjct: 74 GRWPKKSAKIILS 86
Score = 56.8 bits (131), Expect = 2e-07
Identities = 26/72 (36%), Positives = 44/72 (61%)
Frame = +1
Query: 217 TGSLAQEIRRIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPY 396
+G ++ +I L L++N +S + + I +I +N+A RRRT+RAHGR+N +
Sbjct: 73 SGRWPKKSAKIILSLIKNLNSIVSKNKSEDNPFYIKNININQAVRGRRRTFRAHGRVNSF 132
Query: 397 MSSPCHIEVCLS 432
S+PCHI + L+
Sbjct: 133 ESNPCHIRISLT 144
>UniRef50_Q6ZNV0 Cluster: CDNA FLJ27083 fis, clone SPL03425; n=2;
Homo sapiens|Rep: CDNA FLJ27083 fis, clone SPL03425 -
Homo sapiens (Human)
Length = 136
Score = 74.5 bits (175), Expect = 9e-13
Identities = 32/54 (59%), Positives = 44/54 (81%)
Frame = +1
Query: 277 SNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSER 438
SNA+ K LD+D L+I+ IQVN+AP + TYRAHG+INPY++S CHIE+ L+E+
Sbjct: 36 SNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTSACHIEMILTEK 89
>UniRef50_A7PPU4 Cluster: Chromosome chr18 scaffold_24, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_24, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 330
Score = 70.9 bits (166), Expect = 1e-11
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +2
Query: 5 DNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVG 184
DNP K CK R S+ RVHFKNT ET A ++ L A YL++ ++ +PF RF GVG
Sbjct: 9 DNPTKFCKTRDSDFRVHFKNTRETTDATSRLLLTMAREYLEDAPVHEQAMPFTRFCRGVG 68
Query: 185 RCAQAK-QFGTTQGRWPKKSAEFL 253
R AQAK + QG KS +++
Sbjct: 69 RTAQAKNRHSNGQGCSSVKSVKYI 92
Score = 34.3 bits (75), Expect = 1.2
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = +1
Query: 211 HNTGSLAQEIRRIP--LQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAH 378
H+ G ++ + L LL++A+SNAD K LDV+ I HIQ R Y +H
Sbjct: 77 HSNGQGCSSVKSVKYILVLLKHAESNADLKGLDVNSPYISHIQPCTGGFHFRSLYLSH 134
>UniRef50_A2DM53 Cluster: Ribosomal protein L22, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L22,
putative - Trichomonas vaginalis G3
Length = 164
Score = 65.7 bits (153), Expect = 4e-10
Identities = 31/78 (39%), Positives = 44/78 (56%)
Frame = +2
Query: 14 AKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCA 193
+K+ KA RVHFK ET I+ M + A+ YL+ V+ K+ +PF R+ GG+ A
Sbjct: 13 SKALKASTGLERVHFKPMMETGRVIKGMKAQDAIAYLEAVMRKERAVPFFRYKGGISHHA 72
Query: 194 QAKQFGTTQGRWPKKSAE 247
Q ++G RWP K AE
Sbjct: 73 QGHEWGCPTSRWPVKCAE 90
Score = 50.0 bits (114), Expect = 2e-05
Identities = 23/64 (35%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +1
Query: 253 LQLLRNADSNADNKT-LDVDRLVIDHIQVNRAPCLR-RRTYRAHGRINPYMSSPCHIEVC 426
++L++ A + A K ++VD +++ H+Q NRA R RR ++AHGR+ Y S P ++++
Sbjct: 93 IKLIKTALAGAPQKPGVNVDEVLVAHVQCNRATQYRWRRIHQAHGRVKSYASPPTNVQIV 152
Query: 427 LSER 438
L+E+
Sbjct: 153 LAEK 156
>UniRef50_Q8TX36 Cluster: 50S ribosomal protein L22P; n=7;
Archaea|Rep: 50S ribosomal protein L22P - Methanopyrus
kandleri
Length = 159
Score = 56.4 bits (130), Expect = 3e-07
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +1
Query: 214 NTGSLAQEIRRIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINP 393
+ G ++ R L++L +A++NA+ K LD DRL I HI ++ +R RA GR P
Sbjct: 85 DAGRFPEKAAREILRVLEHAEANAEYKGLDTDRLYIKHIAAHKGRVIRGWIPRAFGRATP 144
Query: 394 YMSSPCHIEVCLSER 438
+ + HIEV L ER
Sbjct: 145 FNTPTTHIEVILEER 159
Score = 52.4 bits (120), Expect = 4e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Frame = +2
Query: 17 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 196
++ KA LR+ K+ E AIR MPL RA +L+ VI K+E +PFR+ V Q
Sbjct: 20 RTAKAFIRELRISPKHAREICRAIRGMPLDRAKEFLRRVIRKEEAVPFRKHKKKVPHRRQ 79
Query: 197 AKQFGTTQGRWPKKSA 244
+ G GR+P+K+A
Sbjct: 80 IRP-GWDAGRFPEKAA 94
>UniRef50_Q9YF76 Cluster: 50S ribosomal protein L22P; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L22P -
Aeropyrum pernix
Length = 156
Score = 54.4 bits (125), Expect = 1e-06
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 26 KARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNG-GVGRCAQAK 202
KA N+ VH K E A AI M + A RYL+ VIEK+E +PFRR +G R A
Sbjct: 18 KAVLRNVPVHPKIMAEVARAISGMRVDEARRYLRAVIEKREAVPFRRAHGKQAHRRGLAD 77
Query: 203 QFGTTQGRWPKKSAEFL 253
++G GR+P K+A ++
Sbjct: 78 KWGWPVGRYPVKAARYM 94
Score = 50.8 bits (116), Expect = 1e-05
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = +1
Query: 244 RIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEV 423
R L+LL N ++NA NK LDV+RL I H+ ++ L+R RA GR P HIE+
Sbjct: 92 RYMLKLLDNVEANAANKNLDVERLKIIHVAAHKGITLKRWMPRAWGRATPRNRVHSHIEI 151
Query: 424 CLSE 435
+ E
Sbjct: 152 MVRE 155
>UniRef50_UPI0001553410 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 405
Score = 53.2 bits (122), Expect = 3e-06
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +2
Query: 11 PAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGR 187
P KSCK+ GSNL VHFKN +E + I + + LK V K + + F+ +NGGV R
Sbjct: 76 PHKSCKSWGSNLCVHFKNIWEISQVIEGTDICKFTESLKGVTLKNQYMLFQLYNGGVNR 134
>UniRef50_Q9UXA2 Cluster: 50S ribosomal protein L22P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L22P -
Sulfolobus solfataricus
Length = 157
Score = 53.2 bits (122), Expect = 3e-06
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = +1
Query: 238 IRRIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHI 417
IR++ L++L NA++NA NK LDVD+L+I HI ++ L+R RA GR +I
Sbjct: 91 IRQV-LKVLENAEANATNKGLDVDKLIIRHIAAHKGITLQRYMPRAFGRATAKYRRTSNI 149
Query: 418 EVCLSERE 441
EV L E E
Sbjct: 150 EVILEEVE 157
Score = 43.6 bits (98), Expect = 0.002
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 17 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 196
K KA ++ ++ Y AIR M L A +L V+E+KE +PF R+N G +
Sbjct: 15 KIAKAVIRDVPESIRDLYNVCKAIRGMYLNDAKDFLNRVLEEKEALPFWRYNKGASHKSN 74
Query: 197 -AKQFGTTQGRWPKKS 241
+ ++ GR+PKK+
Sbjct: 75 ISAKWKIKAGRYPKKA 90
>UniRef50_A0RVX8 Cluster: Ribosomal protein L22; n=2;
Thermoprotei|Rep: Ribosomal protein L22 - Cenarchaeum
symbiosum
Length = 152
Score = 52.0 bits (119), Expect = 6e-06
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 NPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGR 187
+P + +A ++ K+ E ++ IR M + +A +L+ VIEKK +PFRRF VG
Sbjct: 12 DPTRHVRASLREKQISHKHAREISLHIRGMTVEKARDFLQAVIEKKRAVPFRRFKRQVGH 71
Query: 188 CAQAKQFGTTQGRWPKKS-AEFL 253
+ G GR+P+KS AEF+
Sbjct: 72 RSDP---GVMAGRYPEKSAAEFI 91
Score = 39.1 bits (87), Expect = 0.044
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +1
Query: 253 LQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 432
++LL N +SNA+ K +D+DRL I ++ ++R RA GR P + H+E+
Sbjct: 91 IKLLDNLESNAEYKGMDLDRLTIVGAVAHKGILIKRFIPRAMGRSTPKNNVLTHVELVAR 150
Query: 433 E 435
E
Sbjct: 151 E 151
>UniRef50_O28359 Cluster: 50S ribosomal protein L22P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L22P -
Archaeoglobus fulgidus
Length = 155
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/84 (30%), Positives = 47/84 (55%)
Frame = +2
Query: 2 PDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 181
P++ K+ KA G + + FK+ E AIR + A + L++V+E K IPF+R V
Sbjct: 12 PEDETKAAKAMGYEMPISFKHAVEICRAIRGKKIEEARKLLEDVVEMKRAIPFKRHKKKV 71
Query: 182 GRCAQAKQFGTTQGRWPKKSAEFL 253
+++ GR+P+K+A+++
Sbjct: 72 AHRRGLEKW--YAGRYPQKAAKYV 93
Score = 47.6 bits (108), Expect = 1e-04
Identities = 26/77 (33%), Positives = 39/77 (50%)
Frame = +1
Query: 208 WHNTGSLAQEIRRIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRI 387
W+ G Q+ + L++LRN ++NA+ K LDV+ LVI H Q + + R RA GR
Sbjct: 80 WY-AGRYPQKAAKYVLKVLRNLEANAEYKGLDVENLVIVHAQAQKGRVIERYMPRAFGRA 138
Query: 388 NPYMSSPCHIEVCLSER 438
P +E+ R
Sbjct: 139 TPRFQQLTTVELVAEVR 155
>UniRef50_A5AXX3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 467
Score = 50.8 bits (116), Expect = 1e-05
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +2
Query: 5 DNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 181
DNP K C S+ RVHFKNT T A + L A YL++ + +++ +PF RF G+
Sbjct: 279 DNPTKFCNTGDSDSRVHFKNTRVTTRATSMLLLTMARGYLEDALVREQTMPFTRFCRGI 337
>UniRef50_Q9V1U0 Cluster: 50S ribosomal protein L22P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L22P -
Pyrococcus abyssi
Length = 155
Score = 50.4 bits (115), Expect = 2e-05
Identities = 27/60 (45%), Positives = 34/60 (56%)
Frame = +1
Query: 256 QLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSE 435
++L NA +NA K LD D+L I HI +R P LR RA GR P+ HIEV + E
Sbjct: 93 KVLLNAQNNAKQKGLDPDKLRIIHIAAHRGPVLRGWYPRAFGRPTPFNEQTTHIEVVVEE 152
Score = 47.6 bits (108), Expect = 1e-04
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = +2
Query: 8 NPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGR 187
+P + +A G +LR+ K E +R M L A+RYL +VI + +P +R+N G
Sbjct: 13 DPERMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALRRPVPLKRYNDSQGH 72
Query: 188 CAQAKQFGTTQGRWPKKSAE 247
K FG GR+P K A+
Sbjct: 73 -KPGKGFG--PGRYPVKVAK 89
>UniRef50_Q0W1Y4 Cluster: 50S ribosomal protein L22P; n=4;
Archaea|Rep: 50S ribosomal protein L22P - Uncultured
methanogenic archaeon RC-I
Length = 153
Score = 49.6 bits (113), Expect = 3e-05
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 NPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGR 187
+PA + KA + V K+ E IR M L A YL++VI+KK +PF++ VG
Sbjct: 11 DPATTAKAMAYEINVSPKHCQEICRQIRGMKLSAAKTYLQDVIDKKRSVPFKQHARNVGH 70
Query: 188 CAQAKQFGTTQGRWP-KKSAEFL 253
+ Q G GR+P K S E L
Sbjct: 71 --KRHQSGWPSGRYPVKASTEIL 91
>UniRef50_P15008 Cluster: 50S ribosomal protein L22P; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L22P -
Halobacterium salinarium (Halobacterium halobium)
Length = 156
Score = 48.8 bits (111), Expect = 5e-05
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +1
Query: 253 LQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 432
L+LL N +NAD + D D +VI+H+ ++ + R RA GR + ++ C +E+ ++
Sbjct: 90 LKLLSNVSNNADQQGFDADEMVIEHVAPHKVGESQGRKPRAMGRATTWNATLCDVEIVVT 149
Query: 433 EREDAVA 453
E E+ A
Sbjct: 150 ETEEVTA 156
Score = 37.1 bits (82), Expect = 0.18
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 SCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQA 199
S KA + K++ A I + A YL+ VI+++ +PF++ N GVG
Sbjct: 14 SAKAMLRERSISLKHSKAIAREISGETVADAKEYLQAVIDEERSVPFKQHNSGVGHRNDI 73
Query: 200 KQFGTTQGRWPKK-SAEFL 253
G GR+P+K S +FL
Sbjct: 74 D--GWDAGRYPEKASKDFL 90
>UniRef50_Q9HIR4 Cluster: 50S ribosomal protein L22P; n=5;
Thermoplasmatales|Rep: 50S ribosomal protein L22P -
Thermoplasma acidophilum
Length = 151
Score = 46.8 bits (106), Expect = 2e-04
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +1
Query: 256 QLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSE 435
QLL N ++NA+ K L+ D LVI HI N+ +++ T +A+GR ++E+ ++E
Sbjct: 89 QLLENVENNAEFKGLNTDNLVIKHIAANKGRMIKKYTPKAYGRAGANFKDLINLEIIVTE 148
Score = 35.1 bits (77), Expect = 0.71
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +2
Query: 26 KARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQ 205
KAR + K++ A +R MPL RA + VI K IP+ R+ V + +
Sbjct: 17 KARIREADISLKDSVNIAHHLRGMPLSRAKEIIDAVINKTYAIPYFRYLDSV-----SHR 71
Query: 206 FGTTQGRWPKKSAE 247
G GR+P K+A+
Sbjct: 72 PGVGPGRYPVKAAK 85
>UniRef50_UPI0000056230 Cluster: ribosomal protein L22; n=1; Aquifex
aeolicus VF5|Rep: ribosomal protein L22 - Aquifex
aeolicus VF5
Length = 98
Score = 44.8 bits (101), Expect = 9e-04
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +1
Query: 226 LAQEIRRIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSS 405
+ ++ RI ++L++ +NA+ K LD+DRL I + P L++ RAHGR
Sbjct: 21 IPKKAARIAEKVLKSVIANAEQKGLDLDRLYIKKAVADDGPILKKWIPRAHGRATMVRKR 80
Query: 406 PCHIEVCLSERED 444
HI + L E+ +
Sbjct: 81 LSHITIVLEEKPE 93
>UniRef50_Q6F1Y9 Cluster: 50S ribosomal protein L22; n=2;
Firmicutes|Rep: 50S ribosomal protein L22 - Mesoplasma
florum (Acholeplasma florum)
Length = 112
Score = 44.8 bits (101), Expect = 9e-04
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 253 LQLLRNADSNA-DNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCL 429
L+LL +A +NA +N +D D+L + I VN P L+R RAHGR + H+ + +
Sbjct: 48 LKLLNSAIANAVNNNGMDADKLFVKTIFVNEGPTLKRFRPRAHGRAYEILKRTSHVTIIV 107
Query: 430 SE 435
S+
Sbjct: 108 SD 109
>UniRef50_O66436 Cluster: 50S ribosomal protein L22; n=3;
Aquifex|Rep: 50S ribosomal protein L22 - Aquifex
aeolicus
Length = 133
Score = 44.8 bits (101), Expect = 9e-04
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +1
Query: 226 LAQEIRRIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSS 405
+ ++ RI ++L++ +NA+ K LD+DRL I + P L++ RAHGR
Sbjct: 56 IPKKAARIAEKVLKSVIANAEQKGLDLDRLYIKKAVADDGPILKKWIPRAHGRATMVRKR 115
Query: 406 PCHIEVCLSERED 444
HI + L E+ +
Sbjct: 116 LSHITIVLEEKPE 128
>UniRef50_O85387 Cluster: 50S ribosomal protein L22; n=179;
Bacteria|Rep: 50S ribosomal protein L22 - Coxiella
burnetii
Length = 115
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 QLLRNADSNAD-NKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 432
++L +A +NA+ N+ D+D L + + V+ P RR RA GR N + CHI V +S
Sbjct: 49 KVLDSAIANAEHNEGADIDELKVSTVMVDEGPSARRFHARARGRANQILKRTCHITVKVS 108
Query: 433 ERE 441
+ +
Sbjct: 109 DSQ 111
>UniRef50_O83224 Cluster: 50S ribosomal protein L22; n=1; Treponema
pallidum|Rep: 50S ribosomal protein L22 - Treponema
pallidum
Length = 124
Score = 43.2 bits (97), Expect = 0.003
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 220 GSLAQEIRRIPLQLLRNADSNA--DNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINP 393
G L + R+ +++++A SNA +K LD +RL + IQ++ P L+R R GR +
Sbjct: 41 GHLPHKGARLISKVMKSAASNAIDRDKRLDEERLFVRDIQIDEGPRLKRLWCRGRGRGDV 100
Query: 394 YMSSPCHIEVCLSE 435
+ CHI V + E
Sbjct: 101 QLKRMCHITVVVEE 114
>UniRef50_Q68W83 Cluster: 50S ribosomal protein L22; n=11;
Alphaproteobacteria|Rep: 50S ribosomal protein L22 -
Rickettsia typhi
Length = 119
Score = 41.5 bits (93), Expect = 0.008
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 232 QEIRRIPLQLLRNADSNADNKT-LDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 408
+ I +I LR+A +NA+N LD+DRL+I V ++ ++R RA GR
Sbjct: 47 KRIAKIVKDCLRSAVANAENNLGLDIDRLIITKATVGKSVVMKRIMPRAKGRATRINKFF 106
Query: 409 CHIEVCLSERED 444
++++ ++E+ED
Sbjct: 107 SNLDITVTEKED 118
>UniRef50_Q8XV17 Cluster: 50S ribosomal protein L22; n=30;
Bacteria|Rep: 50S ribosomal protein L22 - Ralstonia
solanacearum (Pseudomonas solanacearum)
Length = 109
Score = 41.5 bits (93), Expect = 0.008
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 256 QLLRNADSNAD-NKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCL 429
+++ +A +NA+ N+ D+D L + I +++A L+R T RA GR N CHI V L
Sbjct: 49 KVVESAIANAEHNEGADIDELKVKSIYIDKATSLKRFTARAKGRGNRIEKQTCHITVTL 107
>UniRef50_Q2QAS6 Cluster: Ribosomal protein L22; n=2; environmental
samples|Rep: Ribosomal protein L22 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 175
Score = 41.1 bits (92), Expect = 0.011
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +2
Query: 29 ARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF-RRFNGGVGRCAQA-- 199
AR N +H K+ Y+ A A++ M AV YL+ V++++ IP+ RR G G A
Sbjct: 24 ARAVNRDIHHKHCYQIARAVKGMYAGDAVEYLEKVVKQEVAIPYKRRSRAGKGGNTMAGH 83
Query: 200 KQFGTTQGRWPKKSA 244
++ GR+P+ ++
Sbjct: 84 RKGKMGPGRYPRNAS 98
>UniRef50_Q5L418 Cluster: 50S ribosomal protein L22; n=11;
Firmicutes|Rep: 50S ribosomal protein L22 - Geobacillus
kaustophilus
Length = 113
Score = 40.7 bits (91), Expect = 0.014
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 QLLRNADSNAD-NKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 432
++L++A +NA+ N +DV+ LVI V+ P L+R RA GR + HI + +S
Sbjct: 49 KVLKSAVANAEHNYDMDVNNLVITQAYVDEGPTLKRFRPRAMGRASAINKRTSHITIVVS 108
Query: 433 ERED 444
E+++
Sbjct: 109 EKKE 112
>UniRef50_P62650 Cluster: 50S ribosomal protein L22P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L22P -
Nanoarchaeum equitans
Length = 174
Score = 40.3 bits (90), Expect = 0.019
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +2
Query: 26 KARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAK- 202
K NL + K+ E A IR +PL+ A L+ V++K+ +PF R+N + + +
Sbjct: 12 KLYAHNLPISTKHAVEIAKMIRYLPLQLAKEMLQKVLDKELAVPFFRYNRDIPHRKKGQI 71
Query: 203 --QFGTTQGRWPKKSAEFL 253
F GR+P+ + +++
Sbjct: 72 HPYFKIKHGRFPENATKWI 90
>UniRef50_Q92GX1 Cluster: 50S ribosomal protein L22; n=19;
Alphaproteobacteria|Rep: 50S ribosomal protein L22 -
Rickettsia conorii
Length = 119
Score = 38.7 bits (86), Expect = 0.058
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 232 QEIRRIPLQLLRNADSNADNKT-LDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSP 408
+ I ++ L++A +NA+N LD+DRLV+ V +A ++R RA GR
Sbjct: 47 KRIAKVVKDCLQSAVANAENNLGLDIDRLVVTKATVGKALVMKRVMPRAKGRATRINKFF 106
Query: 409 CHIEVCLSERED 444
++ + ++E+ED
Sbjct: 107 SNLYITVTEKED 118
>UniRef50_Q2FT36 Cluster: 50S ribosomal protein L22P; n=4;
Methanomicrobiales|Rep: 50S ribosomal protein L22P -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 154
Score = 38.3 bits (85), Expect = 0.076
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 59 KNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKK 238
K+ E A IR M L A YL+ V+ ++ IPF+RFN V + G GR+P+K
Sbjct: 28 KHAIEIAGFIRGMKLDDAAAYLEGVVALQKPIPFKRFNRNVPH--RKGLVGWDAGRYPQK 85
Query: 239 SA 244
++
Sbjct: 86 AS 87
>UniRef50_A0CDD8 Cluster: Chromosome undetermined scaffold_17, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_17,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 341
Score = 37.5 bits (83), Expect = 0.13
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 277 SNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSER 438
S+A + D +RL + IQV R R+ + A RINP I+V L ER
Sbjct: 172 SHAVQRGYDPERLYVQSIQVGRYKKFRKARFHAKARINPAFRETSQIKVILEER 225
>UniRef50_P56795 Cluster: Chloroplast 50S ribosomal protein L22;
n=36; Magnoliophyta|Rep: Chloroplast 50S ribosomal
protein L22 - Arabidopsis thaliana (Mouse-ear cress)
Length = 160
Score = 37.1 bits (82), Expect = 0.18
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 256 QLLRNADSNAD-NKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 432
+L+ +A +NA NK LVI +VN+ +++ RA GR P S CHI + L
Sbjct: 59 KLVYSAAANASHNKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLE 118
Query: 433 E 435
+
Sbjct: 119 D 119
>UniRef50_A7M935 Cluster: Ribosomal protein L22; n=1; Cuscuta
gronovii|Rep: Ribosomal protein L22 - Cuscuta gronovii
(Common dodder)
Length = 147
Score = 36.7 bits (81), Expect = 0.23
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 271 ADSNADN-KTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSE 435
A SNA + T + L I +VN P +++ RA GR P + CHI + L++
Sbjct: 60 AASNASSTSTSKKENLFISKAEVNERPAIKKLKPRARGRSYPIKKATCHITIVLTD 115
>UniRef50_Q7QWE5 Cluster: GLP_336_29458_28835; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_29458_28835 - Giardia lamblia
ATCC 50803
Length = 207
Score = 36.3 bits (80), Expect = 0.31
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = -1
Query: 235 LGPATLCCAKLLCLSTATNAAVEATEWNTLFLFNHVFEVTNSTTERHLSDCHCGLICVLK 56
LGPATL A L A + VE E + L + V EV + + H D G +CVL+
Sbjct: 105 LGPATLVRAAPPGLRVAPDTLVELEEGDDLLVVQDVVEVGKGSLDPHSLDSSAGGVCVLE 164
>UniRef50_Q3LVW9 Cluster: Ribosomal protein L17; n=1; Bigelowiella
natans|Rep: Ribosomal protein L17 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 152
Score = 35.9 bits (79), Expect = 0.41
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 262 LRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEV 423
L+N N ++ + +D ID I +NR R+ YRA+GR N + C I +
Sbjct: 93 LKNCLHNKIDERVVLDAYYIDSIIINRGKKYLRKIYRAYGRANNIIHQQCSITI 146
>UniRef50_Q8ZWH7 Cluster: 50S ribosomal protein L22P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L22P -
Pyrobaculum aerophilum
Length = 168
Score = 35.9 bits (79), Expect = 0.41
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 235 EIRRIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCH 414
++ R LQ+L N ++NA + LDVDR+VI H ++ + RA GR + +
Sbjct: 85 KVARRFLQVLENLENNARFRGLDVDRVVIVHAAAHKGFKIPNIMPRAFGRATRFDEQTVN 144
Query: 415 IEVCLSE 435
+E+ E
Sbjct: 145 VELVAVE 151
>UniRef50_Q01BQ9 Cluster: 50S ribosomal protein L22-like; n=2;
Ostreococcus|Rep: 50S ribosomal protein L22-like -
Ostreococcus tauri
Length = 109
Score = 35.1 bits (77), Expect = 0.71
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 QLLRNADSNA-DNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 432
+++++A NA +N+ LD DRLVI V + LRR + GR H+ + +
Sbjct: 12 KVIQSAVGNAVNNQGLDRDRLVIAWATVGKGQYLRRVSMHGRGRAGVMHRPRTHVAIAVE 71
Query: 433 ERED 444
E +D
Sbjct: 72 ENDD 75
>UniRef50_Q06GV7 Cluster: Chloroplast 50S ribosomal protein L22;
n=16; Eukaryota|Rep: Chloroplast 50S ribosomal protein
L22 - Drimys granadensis
Length = 173
Score = 35.1 bits (77), Expect = 0.71
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 253 LQLLRNADSNAD-NKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCL 429
L+L+ +A +NA NK + LVI +VN +++ RA G P CHI + L
Sbjct: 59 LKLVYSAAANASHNKGFNKADLVISQAEVNGGTIIKKLKPRARGHSYPIKRPTCHINIVL 118
Query: 430 SER 438
++
Sbjct: 119 KDQ 121
>UniRef50_A6GCH4 Cluster: 50S ribosomal protein L22; n=1;
Plesiocystis pacifica SIR-1|Rep: 50S ribosomal protein
L22 - Plesiocystis pacifica SIR-1
Length = 113
Score = 34.7 bits (76), Expect = 0.94
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 QLLRNADSNADNK-TLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHI 417
+L+ +A +NA+++ DVD LVI + V++ P L+R RA GR H+
Sbjct: 48 KLIVSAVANAEDQGNADVDNLVITRVTVDQGPTLKRWRPRAQGRGTRIQKKTSHV 102
>UniRef50_P23408 Cluster: 50S ribosomal protein L22, chloroplast
precursor; n=6; cellular organisms|Rep: 50S ribosomal
protein L22, chloroplast precursor - Pisum sativum
(Garden pea)
Length = 204
Score = 34.7 bits (76), Expect = 0.94
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 253 LQLLRNADSNAD-NKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEV 423
++++ +A +NA N L L I +VN L+R RA GR N + CHI +
Sbjct: 131 IKIVFSAGANASHNLGLSKSSLFISKAEVNEGKTLKRVRARAQGRANQILKRTCHITI 188
>UniRef50_Q0EW41 Cluster: Ribosomal protein L22; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ribosomal protein L22 -
Mariprofundus ferrooxydans PV-1
Length = 113
Score = 33.5 bits (73), Expect = 2.2
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 244 RIPLQLLRNADSNAD-NKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIE 420
R+ ++L++A +NA+ N LDVD L + + + L+R + GR+ H+
Sbjct: 47 RLYEKVLKSAIANAEQNHGLDVDALFVSEAKADAGMTLKRFRPKGMGRMRKRFHRHSHLT 106
Query: 421 VCLSER 438
V +SER
Sbjct: 107 VSVSER 112
>UniRef50_Q1ISB7 Cluster: Ribosomal protein L22; n=1; Acidobacteria
bacterium Ellin345|Rep: Ribosomal protein L22 -
Acidobacteria bacterium (strain Ellin345)
Length = 167
Score = 33.1 bits (72), Expect = 2.9
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 226 LAQEIRRIPLQLLRNAD--SNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYM 399
+A I ++ + NA+ SN LD+DRL + N P ++R GR Y
Sbjct: 43 IAPAIYKLVHSAMDNANYLSNEKGLDLDLDRLYVKKAIANDGPRMKRIRPAPMGRAFRYQ 102
Query: 400 SSPCHIEVCLSER 438
HIE+ L+E+
Sbjct: 103 RRISHIEISLAEK 115
>UniRef50_UPI0000F1E090 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 587
Score = 32.7 bits (71), Expect = 3.8
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 5 DNP-AKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKN 130
D P +SC + N ++H K T ETA A+++ L A R L +
Sbjct: 332 DQPLGRSCLSSFQNYQLHLKKTKETAQALKQKRLSEAARILSS 374
>UniRef50_Q4SXP1 Cluster: Chromosome 6 SCAF12355, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 6
SCAF12355, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 513
Score = 32.7 bits (71), Expect = 3.8
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 199 KAVWHNTGSLAQEIRRIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAH 378
+A HNTG + + IP+++ + + N K D V+ H ++ + P +RRRT +
Sbjct: 202 QATLHNTGRIVFAYKEIPIEVSQISSVNHPVKVGLSDAFVVVH-KIQQIPNVRRRTIYEY 260
Query: 379 GRI 387
R+
Sbjct: 261 HRV 263
>UniRef50_Q6CXQ5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 134
Score = 32.3 bits (70), Expect = 5.0
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -1
Query: 259 TAEEFGGFLGPATLCCAKLLCLSTATNAAVEATEWNTLFLFNHVFEV 119
T +E P++L + L L ++TN VE++EWN+ + ++ +V
Sbjct: 83 TLDELDRLSWPSSLGDTEFLTLGSSTNRRVESSEWNSSLVIQNLVQV 129
>UniRef50_P53327 Cluster: Antiviral helicase SLH1; n=11;
Saccharomycetales|Rep: Antiviral helicase SLH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1967
Score = 32.3 bits (70), Expect = 5.0
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -3
Query: 281 FESAFLNNCRGIRRISWASDPVLCQTALLEHSDQR-RR*SDGMEYTLSFQSRF*GNEQHD 105
F + LN C+ I + WA D LCQ L E+ +R R ME+ L ++ G H+
Sbjct: 922 FSNVMLNICKSIEKRLWAFDHPLCQFDLPENIIRRIRDTKPSMEHLLELEADELGELVHN 981
Query: 104 GAA 96
A
Sbjct: 982 KKA 984
>UniRef50_O46899 Cluster: Chloroplast 50S ribosomal protein L22;
n=4; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L22 - Guillardia theta (Cryptomonas phi)
Length = 121
Score = 32.3 bits (70), Expect = 5.0
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 253 LQLLRNADSNAD-NKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEV 423
LQ +++A +NA NK ++ + LV+ V+ P LRR RA GR HI +
Sbjct: 56 LQAVQSAGANAQHNKGINKNDLVVSLASVDNGPVLRRFRPRAQGRGFKIQKFTSHIRI 113
>UniRef50_Q2IJ81 Cluster: 50S ribosomal protein L22; n=4;
Cystobacterineae|Rep: 50S ribosomal protein L22 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 146
Score = 31.9 bits (69), Expect = 6.6
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 256 QLLRNADSNADNK--TLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEV 423
+LLR+A +NA+ +DVD L + + V++ P +RR RA GR H+ V
Sbjct: 81 KLLRSAVANAEQGGGRVDVDALFVKTLTVDQGPKMRRFMARAMGRAFRVEKKTSHVYV 138
>UniRef50_Q89GY5 Cluster: Blr6210 protein; n=2;
Bradyrhizobiaceae|Rep: Blr6210 protein - Bradyrhizobium
japonicum
Length = 337
Score = 31.5 bits (68), Expect = 8.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 191 AQAKQFGTTQGRWPKKSAEFLCSY 262
AQ GT+QG WP + +CSY
Sbjct: 29 AQGTSQGTSQGTWPSRQIRMICSY 52
>UniRef50_A0YAE7 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 204
Score = 31.5 bits (68), Expect = 8.7
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 175 RRWSLCSSKAVWHNTGSLAQEIRRIPLQLLRNADSNADNKTLDVDRLVI 321
+RW+ S++ +W NT S E ++ +Q+ N KT+ DRL+I
Sbjct: 122 KRWAKWSNQLIWENTFSGRIEDKQYAIQIF-NDHIERVKKTISADRLLI 169
>UniRef50_Q0W8I5 Cluster: Putative uncharacterized protein; n=1;
uncultured methanogenic archaeon RC-I|Rep: Putative
uncharacterized protein - Uncultured methanogenic
archaeon RC-I
Length = 252
Score = 31.5 bits (68), Expect = 8.7
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +1
Query: 202 AVWHNTGSLAQEIRRIPLQLLRNADSNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHG 381
A+ H+ +A R Q+ R + +LD D++VIDH + + R Y A
Sbjct: 121 AMKHSLPIIAHSPRSSKAQITREIINVLSTFSLDTDKIVIDHADADTVRLIVDRGYNAGL 180
Query: 382 RINPYMSSP 408
+ P SP
Sbjct: 181 TVQPGKLSP 189
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,029,726
Number of Sequences: 1657284
Number of extensions: 8557706
Number of successful extensions: 22854
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 22245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22846
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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