Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00987
         (454 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   7.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   7.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 89  RKMPLRRAVRYLKNVIEKKECIPFR 163
           R +PLR AV ++ ++I     +P R
Sbjct: 59  RALPLRSAVEHIPDLIADSRRLPLR 83


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +1

Query: 139 KERVYSIPSLQRRRWSLCSSKAVW-HNTGSLAQEIR 243
           K+ +  +PS +R  W  C   A W    GSL +  R
Sbjct: 117 KQFIVKLPSAERVAWMWCLIFAFWVPQLGSLFRSSR 152


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +1

Query: 139 KERVYSIPSLQRRRWSLCSSKAVW-HNTGSLAQEIR 243
           K+ +  +PS +R  W  C   A W    GSL +  R
Sbjct: 117 KQFIVKLPSAERVAWMWCLIFAFWVPQLGSLFRSSR 152


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +1

Query: 139 KERVYSIPSLQRRRWSLCSSKAVW-HNTGSLAQEIR 243
           K+ +  +PS +R  W  C   A W    GSL +  R
Sbjct: 117 KQFIVKLPSAERVAWMWCLIFAFWVPQLGSLFRSSR 152


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +1

Query: 139 KERVYSIPSLQRRRWSLCSSKAVW-HNTGSLAQEIR 243
           K+ +  +PS +R  W  C   A W    GSL +  R
Sbjct: 117 KQFIVKLPSAERVAWMWCLIFAFWVPQLGSLFRSSR 152


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 19  ILQSSWFKPPCSL 57
           +LQS W  P C L
Sbjct: 559 VLQSLWASPTCDL 571


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +3

Query: 324 PHSGKSRALPTQTYIPCSRSHQPLHVVS 407
           P     R+ P Q+ +  S  H+PL + +
Sbjct: 224 PTKSSPRSSPVQSDVSLSPVHEPLLITT 251


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 432 AETYFDVAGRRHVGVDATVST 370
           A  +FD++    +G+ AT++T
Sbjct: 325 AANFFDISRSTFLGILATITT 345


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 216 HRVAGPRNPPNSS 254
           H+  GPR+PP+ S
Sbjct: 352 HQNFGPRHPPDCS 364


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +3

Query: 384 HQPLHVVSLPHRSMSQRTRRC 446
           HQ  H  ++ H  +S    RC
Sbjct: 314 HQQHHQQNMSHEELSAMVNRC 334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,448
Number of Sequences: 336
Number of extensions: 2220
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)