Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00985
         (704 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6ZVA8 Cluster: CDNA FLJ42815 fis, clone BRCAN2014143; ...    38   0.24 
UniRef50_Q9VHA4 Cluster: CG8319-PA; n=1; Drosophila melanogaster...    33   9.0  
UniRef50_Q4YUN7 Cluster: Putative uncharacterized protein; n=1; ...    33   9.0  

>UniRef50_Q6ZVA8 Cluster: CDNA FLJ42815 fis, clone BRCAN2014143;
           n=2; Eukaryota|Rep: CDNA FLJ42815 fis, clone
           BRCAN2014143 - Homo sapiens (Human)
          Length = 189

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +2

Query: 134 VCLNIXLFVCVYTCPDTINDQYTNLQMFARGRLPIYIRTHLMCC 265
           +C+++ ++VCV+ C       YT++ +  R R  +Y+RTH   C
Sbjct: 80  MCMHVCVYVCVHACMCVCTCAYTHVFVCVRVRTCVYMRTHTHIC 123


>UniRef50_Q9VHA4 Cluster: CG8319-PA; n=1; Drosophila
           melanogaster|Rep: CG8319-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 383

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
 Frame = +3

Query: 177 QTRSTTNTQTYKCSRAA-DFRSI----FVHTLCVVVFXIYLNFIDKSIDNSNSYLPGKGE 341
           QT S T   +   SRA    RSI    F   LC+  F   +N +D    +SNS++    E
Sbjct: 124 QTASRTTKSSITTSRAGRQLRSIKNQTFKCELCIKQFKRQINLLDHMKVHSNSHVCQNCE 183

Query: 342 NNFKLKANIDFKTSY 386
             F  KA++D    Y
Sbjct: 184 ERFLFKADLDNHQCY 198


>UniRef50_Q4YUN7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 76

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +3

Query: 162 VCIHVQTRSTTNTQTYKCSRAADFRSIFVHTLC--VVVFXIYL-NFIDKSIDNSNSYL 326
           +C+HV  R   N    KC      R+   H +C    V  +Y+  FI+K+I + N Y+
Sbjct: 15  ICMHVYKRKRNNLLLIKCEEGCYERNKHFHLMCKDKKVSQVYIFFFINKTICSKNGYI 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,315,375
Number of Sequences: 1657284
Number of extensions: 12705982
Number of successful extensions: 24283
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24240
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)