Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00984
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    25   0.79 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   1.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   3.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.2  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   5.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.6  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   7.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.4  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 461 QQPVFLNDYPDFVVPY 508
           + P+F  + PDFV PY
Sbjct: 30  EPPLFYEERPDFVAPY 45


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 57  GIMGGHLKLLFLYIEQKLQIIDTV 128
           GIM   L L+FL I+ + ++I+ +
Sbjct: 99  GIMNSTLNLIFLLIQTRFEMINNI 122


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/62 (24%), Positives = 27/62 (43%)
 Frame = -2

Query: 334 LYVYYFCFTIIK*QVYFIVL*DYAIRYVLLFLSLYKIITSLIFMLFIVLKSTSACTFSIN 155
           +Y +Y+ F +    +  +V   Y     LLF   + I T  + +LF++      C   I 
Sbjct: 238 IYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFT--MHLLFLLCIYYFYCALIIL 295

Query: 154 IC 149
           +C
Sbjct: 296 LC 297


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/29 (27%), Positives = 20/29 (68%)
 Frame = -2

Query: 268 YAIRYVLLFLSLYKIITSLIFMLFIVLKS 182
           + +  +L+F   + IIT +IF++ ++++S
Sbjct: 240 FGLGLLLMFAVSFLIITQVIFVICVLVQS 268


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 530 LLFNNLPSKALQSPDNHSEIR 468
           L FN+LP+ AL+   N S +R
Sbjct: 473 LAFNSLPTVALEVAGNISSLR 493


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
 Frame = +3

Query: 3   NWHNNLKIKYEK--EFRNNY 56
           +W N L+ KY+K  E+R  Y
Sbjct: 99  DWWNELEEKYDKEGEYRKKY 118


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -2

Query: 385 IKQHFKYDRRQSRNAYSLYVYYFCFTIIK*QVYFI 281
           I  +FK   R    +    V+ FC+ I    VY+I
Sbjct: 125 INYNFKESERNDYVSLLQLVFVFCYFIYLFTVYYI 159


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/20 (40%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
 Frame = +3

Query: 3   NWHNNLKIKYEKE--FRNNY 56
           +W N L+ KY+K+  +R  Y
Sbjct: 99  DWWNELEAKYDKDGVYRQKY 118


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 501 CLTGKIIE-QELHEFSNIQCFIPERFDAA 584
           C T  + E QEL+EFSN       +F AA
Sbjct: 295 CQTATMEEKQELYEFSNFVSQHLPKFSAA 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,676
Number of Sequences: 336
Number of extensions: 3970
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)