Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00984
         (701 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY154469-1|AAO18165.1| 1093|Homo sapiens NALP14 protein.               33   0.75 
AM040574-1|CAJ13481.1|  106|Homo sapiens immunoglobulin kappa ch...    30   9.2  

>AY154469-1|AAO18165.1| 1093|Homo sapiens NALP14 protein.
          Length = 1093

 Score = 33.5 bits (73), Expect = 0.75
 Identities = 21/59 (35%), Positives = 26/59 (44%)
 Frame = -3

Query: 405 IFLKTSSLNSISSMTDVNLVMHIVCMCIIFVSRS*SDKFTLSCFKTTPLDTCYYFYLYT 229
           +F    S   + SM  V LV    C C+        D  TL+C  TT L TCY   L+T
Sbjct: 352 VFSSLKSNEMLFSMCQVPLVCWAACTCLKQQMEKGGD-VTLTCQTTTALFTCYISSLFT 409


>AM040574-1|CAJ13481.1|  106|Homo sapiens immunoglobulin kappa chain
           variable region protein.
          Length = 106

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +3

Query: 510 GKIIEQELHEFSNIQCFIPERFDAAGT*GESPKKINGTKFQTSFVRIYVQRFS 668
           GK+ E  ++E SN++  +P RF  +G+  E    IN  +    F   Y Q+++
Sbjct: 41  GKVPELLIYEASNLENGVPSRFSGSGSGTEFNLTINSLQ-PDDFATYYCQQYN 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,110,552
Number of Sequences: 237096
Number of extensions: 1819719
Number of successful extensions: 4061
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4061
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)