Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00983
         (730 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical p...   115   4e-26
Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical pr...   115   4e-26
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...   115   4e-26
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr...    31   0.84 
Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical pr...    31   0.84 
U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.        31   0.84 
AF068713-14|AAK73895.1|  172|Caenorhabditis elegans Ground-like ...    28   7.9  

>Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical
           protein F17C11.9c protein.
          Length = 365

 Score =  115 bits (276), Expect = 4e-26
 Identities = 48/73 (65%), Positives = 59/73 (80%)
 Frame = +3

Query: 510 FDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISG 689
           FD +N+SIW  EYKYPE+L   FMSCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG
Sbjct: 244 FDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISG 303

Query: 690 VWVWRRKELVFPL 728
           +WVW+  +L F L
Sbjct: 304 IWVWKGDKLAFEL 316



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 23/34 (67%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
 Frame = +1

Query: 412 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWES 510
           F  MPKGTF +D+FKR YSNED A K+IP+FWE+
Sbjct: 210 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWEN 243



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 19/40 (47%), Positives = 29/40 (72%)
 Frame = +2

Query: 122 QHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAA 241
           Q+VLD + R S++NV RWF TV +QP V  V+G ++L ++
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASS 157


>Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical
           protein F17C11.9b protein.
          Length = 373

 Score =  115 bits (276), Expect = 4e-26
 Identities = 48/73 (65%), Positives = 59/73 (80%)
 Frame = +3

Query: 510 FDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISG 689
           FD +N+SIW  EYKYPE+L   FMSCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG
Sbjct: 252 FDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISG 311

Query: 690 VWVWRRKELVFPL 728
           +WVW+  +L F L
Sbjct: 312 IWVWKGDKLAFEL 324



 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 39/80 (48%), Positives = 57/80 (71%)
 Frame = +2

Query: 2   SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFL 181
           ++L   L+VLD  L+ +T+LV ER++LADV V   LL AFQ+VLD + R S++NV RWF 
Sbjct: 86  NELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRWFR 145

Query: 182 TVAHQPQVSAVVGSLTLCAA 241
           TV +QP V  V+G ++L ++
Sbjct: 146 TVVNQPAVKEVLGEVSLASS 165



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 23/34 (67%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
 Frame = +1

Query: 412 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWES 510
           F  MPKGTF +D+FKR YSNED A K+IP+FWE+
Sbjct: 218 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWEN 251


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score =  115 bits (276), Expect = 4e-26
 Identities = 48/73 (65%), Positives = 59/73 (80%)
 Frame = +3

Query: 510 FDPENYSIWYAEYKYPEELAKVFMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISG 689
           FD +N+SIW  EYKYPE+L   FMSCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG
Sbjct: 277 FDADNWSIWKCEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISG 336

Query: 690 VWVWRRKELVFPL 728
           +WVW+  +L F L
Sbjct: 337 IWVWKGDKLAFEL 349



 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 39/80 (48%), Positives = 57/80 (71%)
 Frame = +2

Query: 2   SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFL 181
           ++L   L+VLD  L+ +T+LV ER++LADV V   LL AFQ+VLD + R S++NV RWF 
Sbjct: 111 NELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRWFR 170

Query: 182 TVAHQPQVSAVVGSLTLCAA 241
           TV +QP V  V+G ++L ++
Sbjct: 171 TVVNQPAVKEVLGEVSLASS 190



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 23/34 (67%), Positives = 28/34 (82%), Gaps = 1/34 (2%)
 Frame = +1

Query: 412 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWES 510
           F  MPKGTF +D+FKR YSNED A K+IP+FWE+
Sbjct: 243 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWEN 276


>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
           protein F25C8.3b protein.
          Length = 3175

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2

Query: 125 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTL 232
           H L PS+ ++L +V RW L  A  P V    GSL L
Sbjct: 85  HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLL 120


>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
           protein F25C8.3a protein.
          Length = 3184

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2

Query: 125 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTL 232
           H L PS+ ++L +V RW L  A  P V    GSL L
Sbjct: 85  HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLL 120


>Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical
           protein F13G3.8 protein.
          Length = 423

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 715 SSFRRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 605
           S F  H  TP+++ LL   N  T    C  I+  +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382


>U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.
          Length = 423

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 715 SSFRRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 605
           S F  H  TP+++ LL   N  T    C  I+  +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382


>AF068713-14|AAK73895.1|  172|Caenorhabditis elegans Ground-like
           (grd related) protein29 protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 655 CLVKTTIPPSPECGCGAERSS 717
           C +    PP P+CGCG ++ S
Sbjct: 63  CGIPPPPPPPPQCGCGRKKRS 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,521,494
Number of Sequences: 27780
Number of extensions: 349143
Number of successful extensions: 1130
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)