Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00978
         (416 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   2.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   2.8  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   3.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   8.4  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -3

Query: 168 GLKVTILCALLIHMSCHVMV*RLV*QIMLRHIQLVCY*HEDC 43
           G K  IL  +L  ++C VMV   +     + IQ+V Y + +C
Sbjct: 182 GNKPVILTVVLPLLACGVMVVTHITMAHFKIIQVVPYCYINC 223


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 40  EAVFVLIADQLNMPQHNLSDQPSHHNVATHVNK 138
           E + +L ++ LNM Q +     SH  ++  VN+
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNR 333


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 256 NNEAFTSIIISFPFTTLLEFYLVPL 330
           N++AF S+    P + + E Y  P+
Sbjct: 303 NDDAFNSVATPTPTSVMTELYPSPV 327


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = +1

Query: 61  ADQLNMPQHNLSDQPSHHNVATHVNKQRTQYGH 159
           A Q N      ++Q  HH+   H++ Q     H
Sbjct: 307 AQQQNNNNAATNNQNHHHHAGHHIHAQHHVVNH 339


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 295  FTTLLEFYLVPLEVLFVLHNFNESHILNLSYKV 393
            F   +  +LVP      LH   E H+ +  YKV
Sbjct: 1221 FYVCVNGHLVPQNCAPGLHYNPEEHMCDWKYKV 1253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,482
Number of Sequences: 336
Number of extensions: 2319
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)