Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00978
         (416 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   131   9e-33
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   3.4  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   5.9  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    22   7.8  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  131 bits (317), Expect = 9e-33
 Identities = 62/84 (73%), Positives = 66/84 (78%)
 Frame = -2

Query: 253 DKNKYNTPKYRLIVRLSNKDVTXQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAY 74
           DKNKYNTPK+RLIVRLSN+D+T Q+AY RIEGD IVCAAYSHELPRYGVKVGLTNYAAAY
Sbjct: 40  DKNKYNTPKFRLIVRLSNRDITCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAY 99

Query: 73  STGXXXXXXXXXXXXLDTLYTGTT 2
            TG            LDTLY G T
Sbjct: 100 CTGLLVARRILQKLRLDTLYAGCT 123



 Score = 78.2 bits (184), Expect = 1e-16
 Identities = 33/41 (80%), Positives = 39/41 (95%)
 Frame = -3

Query: 369 MGFVKVVKNKQYFKRYQVKFKKRREGKTDYYARKRLVVRTR 247
           MGFVKVVKNKQYFKRYQV+F++RREGKTDYYARKRL+ + +
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDK 41


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 133 NKQRTQYGHLQSESRPPGML 192
           +KQ  +Y H   E +PPG L
Sbjct: 152 SKQALKYYHYYLEGQPPGQL 171


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = +1

Query: 70  LNMPQHNLSDQPSH--HNVATHV---NKQRTQYGHLQSESRPP 183
           +N+PQ +   QP+H  H    H     +Q+ + G  Q E R P
Sbjct: 257 VNLPQQSAQRQPAHRQHQQWPHQQNGQQQQQRMGIHQQEKRRP 299


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 14/51 (27%), Positives = 19/51 (37%)
 Frame = +3

Query: 75  YAAA*FVRPTFTP*RGNSCE*AAHTIWSPSIRE*ATWXVTSLLERRTIRRY 227
           YA       TF P        A +T W  +++    W V+   E  T  RY
Sbjct: 480 YAGVQSHHETFLPTTTEEERNARYTKWKMAVQRSLGWAVSKKSEAMTDERY 530


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,081
Number of Sequences: 2352
Number of extensions: 9050
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)