Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00976
(688 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16ZG7 Cluster: Putative uncharacterized protein; n=3; ... 104 2e-21
UniRef50_Q9VNA4 Cluster: Uncharacterized protein CG1161; n=5; Di... 104 2e-21
UniRef50_Q21960 Cluster: Putative uncharacterized protein; n=3; ... 61 3e-08
UniRef50_Q9NQ34 Cluster: Transmembrane protein 9B precursor; n=4... 52 1e-05
UniRef50_UPI000155534B Cluster: PREDICTED: similar to transmembr... 44 0.003
UniRef50_UPI0000586833 Cluster: PREDICTED: hypothetical protein;... 41 0.033
UniRef50_Q5DC29 Cluster: SJCHGC02565 protein; n=2; Schistosoma j... 40 0.075
UniRef50_Q16ZG6 Cluster: Putative uncharacterized protein; n=2; ... 39 0.13
UniRef50_A7T866 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.7
UniRef50_P02381 Cluster: Mitochondrial ribosomal protein VAR1; n... 33 4.9
UniRef50_UPI00006CE566 Cluster: hypothetical protein TTHERM_0014... 33 8.6
UniRef50_Q1MP45 Cluster: ABC-type cobalt transport system, perme... 33 8.6
UniRef50_A2EVC8 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_Q16ZG7 Cluster: Putative uncharacterized protein; n=3;
Endopterygota|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 193
Score = 104 bits (249), Expect = 2e-21
Identities = 48/70 (68%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDNPIPGTSQTMGATPR-GNVLNRVTHQQDKWKRQVREQRR 179
DPL+NKR A+YQEHTNED+D + + + R GNVLNRV H QDKWKRQVREQRR
Sbjct: 124 DPLLNKRVKANYQEHTNEDEDTSVAVGNHSQDMQVRDGNVLNRVGHSQDKWKRQVREQRR 183
Query: 180 NIYDRHTMLN 209
NIYDRHTMLN
Sbjct: 184 NIYDRHTMLN 193
>UniRef50_Q9VNA4 Cluster: Uncharacterized protein CG1161; n=5;
Diptera|Rep: Uncharacterized protein CG1161 - Drosophila
melanogaster (Fruit fly)
Length = 227
Score = 104 bits (249), Expect = 2e-21
Identities = 49/71 (69%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDN--PIPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPL+NKR A+YQEHTNEDD+ P+P + + R NVLNRV HQQDKWKRQVREQR
Sbjct: 158 DPLLNKRVKANYQEHTNEDDEPTPPLPAVNN-QELSARANVLNRVGHQQDKWKRQVREQR 216
Query: 177 RNIYDRHTMLN 209
R+IYDRHTMLN
Sbjct: 217 RHIYDRHTMLN 227
>UniRef50_Q21960 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 261
Score = 60.9 bits (141), Expect = 3e-08
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 15/84 (17%)
Frame = +3
Query: 3 DPLINKRAMA-SYQEHTNEDDDN---PIPGTSQ----------TMGAT-PRGNVLNRVTH 137
DP++ K+ ++ SYQ+H +E +DN P T T G T R NVL RV
Sbjct: 178 DPMLRKKRLSISYQQHNDEMEDNIFAAAPSTDDESSSASNSMDTQGTTRARSNVLGRVEA 237
Query: 138 QQDKWKRQVREQRRNIYDRHTMLN 209
+Q++W ++V EQRRNI++ HTMLN
Sbjct: 238 EQNRWMKKVEEQRRNIFEDHTMLN 261
>UniRef50_Q9NQ34 Cluster: Transmembrane protein 9B precursor; n=43;
Euteleostomi|Rep: Transmembrane protein 9B precursor -
Homo sapiens (Human)
Length = 198
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDD---DNPIPGTSQTMGAT-PRGNVLNRVTHQQDKWKRQVRE 170
+P++ +R Q ++DD P + + R NVLN+V + Q +WK QV+E
Sbjct: 126 EPILKRRLFGHAQLIQSDDDIGDHQPFANAHDVLARSRSRANVLNKVEYAQQRWKLQVQE 185
Query: 171 QRRNIYDRHTMLN 209
QR++++DRH +L+
Sbjct: 186 QRKSVFDRHVVLS 198
>UniRef50_UPI000155534B Cluster: PREDICTED: similar to transmembrane
protein 9, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to transmembrane protein 9, partial -
Ornithorhynchus anatinus
Length = 50
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 60 DDNPIPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQRRNIYDRHTMLN 209
D + + + + VL RV Q +WK+QV+EQR+ ++DRH ML+
Sbjct: 1 DARSLAAAAAPLTGSRANTVLERVEGAQQRWKQQVQEQRKTVFDRHKMLS 50
>UniRef50_UPI0000586833 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 152
Score = 40.7 bits (91), Expect = 0.033
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 120 LNRVTHQQDKWKRQVREQRRNIYDRHTMLN 209
L RV Q +W+ QV++QR NI+DRHT+L+
Sbjct: 123 LGRVGSAQRRWRSQVQQQRENIFDRHTILS 152
>UniRef50_Q5DC29 Cluster: SJCHGC02565 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC02565 protein - Schistosoma
japonicum (Blood fluke)
Length = 272
Score = 39.5 bits (88), Expect = 0.075
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 51 NEDDDNPIPGTSQTMGATPRG--NVLNRVTHQQDKWKRQVREQRRNIYDRHTMLN 209
++ +++P TM +T G NV+NRV QQ +WK V QR ++ ++LN
Sbjct: 218 SDQNEDPNSLNLSTMPSTSVGMSNVVNRVRDQQQRWKGNVEAQRARVFSERSLLN 272
>UniRef50_Q16ZG6 Cluster: Putative uncharacterized protein; n=2;
Endopterygota|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 210
Score = 38.7 bits (86), Expect = 0.13
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNED 59
DPL+NKR A+YQEHTNED
Sbjct: 124 DPLLNKRVKANYQEHTNED 142
>UniRef50_A7T866 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 164
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 446 HWIRCYSQLCHIRSECVHKNRHNNLSCY*YCCYQDTFCIVEAVQLPLCV 592
H + CY CH+ CV +N+ + C+ C + C+ + +L CV
Sbjct: 38 HELSCYVTACHVLMRCVTRNQ---VLCFVTCFHVPIGCVTRSHELSCCV 83
>UniRef50_P02381 Cluster: Mitochondrial ribosomal protein VAR1; n=6;
Saccharomycetales|Rep: Mitochondrial ribosomal protein
VAR1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 398
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 12 INKRAMASYQEHTNEDDDNPIPGTSQTMGATPRGNVLNRVTH--QQDKWKRQVREQRRNI 185
+N + M + + N ++ NP P GN+ N++ H + W Q+ +N+
Sbjct: 45 MNNKKMNNMKRMLNNNNMNPAGANPVVHRIGPAGNINNKLQHLNNMNNWNTQIYNYNKNM 104
Query: 186 YDRHTMLN*LMTKL 227
+TM + L+ KL
Sbjct: 105 EIMNTMNDKLINKL 118
>UniRef50_UPI00006CE566 Cluster: hypothetical protein
TTHERM_00144880; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00144880 - Tetrahymena
thermophila SB210
Length = 897
Score = 32.7 bits (71), Expect = 8.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 123 NRVTHQQDKWKRQVREQRRNIYDR 194
N HQ D W++++ +QRRN +DR
Sbjct: 142 NPEDHQYDSWEKEIDKQRRNFWDR 165
>UniRef50_Q1MP45 Cluster: ABC-type cobalt transport system, permease
component CbiQ and related transporters; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: ABC-type cobalt
transport system, permease component CbiQ and related
transporters - Lawsonia intracellularis (strain
PHE/MN1-00)
Length = 236
Score = 32.7 bits (71), Expect = 8.6
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -1
Query: 337 LILIYIAF-YQHCLYNTHACQSLYSNSTLHYHS 242
L L I+F +CLYN QS+Y STL+YH+
Sbjct: 30 LYLCIISFCLLNCLYNPFFNQSIYKKSTLYYHA 62
>UniRef50_A2EVC8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 232
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = +2
Query: 374 LQDTTKNYKNIKYXXXXXXXXXXXHWIRCYSQLCHIRSECVHKNRHN 514
L+ +NY N+ Y HW+ + C SEC+H N
Sbjct: 169 LRARLRNYLNVLYYLDESVDEKKKHWMNSLNHYCGDHSECLHSREDN 215
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,600,110
Number of Sequences: 1657284
Number of extensions: 12710941
Number of successful extensions: 30322
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 29055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30313
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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