BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00976
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533467-1|CAG38498.1| 185|Homo sapiens TMEM9 protein. 54 4e-07
CR457162-1|CAG33443.1| 183|Homo sapiens TMEM9 protein. 54 4e-07
BC001106-1|AAH01106.1| 183|Homo sapiens transmembrane protein 9... 54 4e-07
AY359012-1|AAQ89371.1| 183|Homo sapiens TMEM9 protein. 54 4e-07
AY138587-1|AAN15925.1| 183|Homo sapiens transmembrane protein 9... 54 4e-07
AL139159-6|CAI23212.1| 183|Homo sapiens transmembrane protein 9... 54 4e-07
AL139159-5|CAI23210.1| 186|Homo sapiens transmembrane protein 9... 54 4e-07
AK075335-1|BAC11554.1| 183|Homo sapiens protein ( Homo sapiens ... 54 4e-07
AK054883-1|BAB70820.1| 186|Homo sapiens protein ( Homo sapiens ... 54 4e-07
AB013909-1|BAB87799.1| 183|Homo sapiens dermal papilla derived ... 54 4e-07
BC040124-1|AAH40124.1| 198|Homo sapiens TMEM9 domain family, me... 52 2e-06
BC015884-1|AAH15884.1| 124|Homo sapiens TMEM9B protein protein. 52 2e-06
AY359069-1|AAQ89428.1| 198|Homo sapiens C11orf15 protein. 52 2e-06
AK074677-1|BAC11131.1| 198|Homo sapiens protein ( Homo sapiens ... 52 2e-06
AJ400877-3|CAB92287.1| 198|Homo sapiens C11orf15 protein protein. 52 2e-06
AB097017-1|BAC77370.1| 198|Homo sapiens putative NFkB activatin... 52 2e-06
>CR533467-1|CAG38498.1| 185|Homo sapiens TMEM9 protein.
Length = 185
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDNP--IPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPLI K + Q H E++++ + + ++G VL RV Q +WK QV+EQR
Sbjct: 115 DPLIRKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 174
Query: 177 RNIYDRHTMLN 209
+ ++DRH ML+
Sbjct: 175 KTVFDRHKMLS 185
>CR457162-1|CAG33443.1| 183|Homo sapiens TMEM9 protein.
Length = 183
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDNP--IPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPLI K + Q H E++++ + + ++G VL RV Q +WK QV+EQR
Sbjct: 113 DPLIRKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 172
Query: 177 RNIYDRHTMLN 209
+ ++DRH ML+
Sbjct: 173 KTVFDRHKMLS 183
>BC001106-1|AAH01106.1| 183|Homo sapiens transmembrane protein 9
protein.
Length = 183
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDNP--IPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPLI K + Q H E++++ + + ++G VL RV Q +WK QV+EQR
Sbjct: 113 DPLIRKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 172
Query: 177 RNIYDRHTMLN 209
+ ++DRH ML+
Sbjct: 173 KTVFDRHKMLS 183
>AY359012-1|AAQ89371.1| 183|Homo sapiens TMEM9 protein.
Length = 183
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDNP--IPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPLI K + Q H E++++ + + ++G VL RV Q +WK QV+EQR
Sbjct: 113 DPLIRKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 172
Query: 177 RNIYDRHTMLN 209
+ ++DRH ML+
Sbjct: 173 KTVFDRHKMLS 183
>AY138587-1|AAN15925.1| 183|Homo sapiens transmembrane protein 9
precursor protein.
Length = 183
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDNP--IPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPLI K + Q H E++++ + + ++G VL RV Q +WK QV+EQR
Sbjct: 113 DPLIRKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 172
Query: 177 RNIYDRHTMLN 209
+ ++DRH ML+
Sbjct: 173 KTVFDRHKMLS 183
>AL139159-6|CAI23212.1| 183|Homo sapiens transmembrane protein 9
protein.
Length = 183
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDNP--IPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPLI K + Q H E++++ + + ++G VL RV Q +WK QV+EQR
Sbjct: 113 DPLIRKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 172
Query: 177 RNIYDRHTMLN 209
+ ++DRH ML+
Sbjct: 173 KTVFDRHKMLS 183
>AL139159-5|CAI23210.1| 186|Homo sapiens transmembrane protein 9
protein.
Length = 186
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDNP--IPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPLI K + Q H E++++ + + ++G VL RV Q +WK QV+EQR
Sbjct: 116 DPLIRKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 175
Query: 177 RNIYDRHTMLN 209
+ ++DRH ML+
Sbjct: 176 KTVFDRHKMLS 186
>AK075335-1|BAC11554.1| 183|Homo sapiens protein ( Homo sapiens
cDNA PSEC0012 fis, clone NT2RM1000853, highly similar to
Transmembrane protein 9 precursor. ).
Length = 183
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDNP--IPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPLI K + Q H E++++ + + ++G VL RV Q +WK QV+EQR
Sbjct: 113 DPLIRKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 172
Query: 177 RNIYDRHTMLN 209
+ ++DRH ML+
Sbjct: 173 KTVFDRHKMLS 183
>AK054883-1|BAB70820.1| 186|Homo sapiens protein ( Homo sapiens
cDNA FLJ30321 fis, clone BRACE2006281. ).
Length = 186
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDNP--IPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPLI K + Q H E++++ + + ++G VL RV Q +WK QV+EQR
Sbjct: 116 DPLIRKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 175
Query: 177 RNIYDRHTMLN 209
+ ++DRH ML+
Sbjct: 176 KTVFDRHKMLS 186
>AB013909-1|BAB87799.1| 183|Homo sapiens dermal papilla derived
protein 4 (DERP4) protein.
Length = 183
Score = 54.4 bits (125), Expect = 4e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDNP--IPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPLI K + Q H E++++ + + ++G VL RV Q +WK QV+EQR
Sbjct: 113 DPLIRKPDAYTEQLHNEEENEDARSMAAAAASLGGPRANTVLERVEGAQQRWKLQVQEQR 172
Query: 177 RNIYDRHTMLN 209
+ ++DRH ML+
Sbjct: 173 KTVFDRHKMLS 183
>BC040124-1|AAH40124.1| 198|Homo sapiens TMEM9 domain family,
member B protein.
Length = 198
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDD---DNPIPGTSQTMGAT-PRGNVLNRVTHQQDKWKRQVRE 170
+P++ +R Q ++DD P + + R NVLN+V + Q +WK QV+E
Sbjct: 126 EPILKRRLFGHAQLIQSDDDIGDHQPFANAHDVLARSRSRANVLNKVEYAQQRWKLQVQE 185
Query: 171 QRRNIYDRHTMLN 209
QR++++DRH +L+
Sbjct: 186 QRKSVFDRHVVLS 198
>BC015884-1|AAH15884.1| 124|Homo sapiens TMEM9B protein protein.
Length = 124
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDD---DNPIPGTSQTMGAT-PRGNVLNRVTHQQDKWKRQVRE 170
+P++ +R Q ++DD P + + R NVLN+V + Q +WK QV+E
Sbjct: 52 EPILKRRLFGHAQLIQSDDDIGDHQPFANAHDVLARSRSRANVLNKVEYAQQRWKLQVQE 111
Query: 171 QRRNIYDRHTMLN 209
QR++++DRH +L+
Sbjct: 112 QRKSVFDRHVVLS 124
>AY359069-1|AAQ89428.1| 198|Homo sapiens C11orf15 protein.
Length = 198
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDD---DNPIPGTSQTMGAT-PRGNVLNRVTHQQDKWKRQVRE 170
+P++ +R Q ++DD P + + R NVLN+V + Q +WK QV+E
Sbjct: 126 EPILKRRLFGHAQLIQSDDDIGDHQPFANAHDVLARSRSRANVLNKVEYAQQRWKLQVQE 185
Query: 171 QRRNIYDRHTMLN 209
QR++++DRH +L+
Sbjct: 186 QRKSVFDRHVVLS 198
>AK074677-1|BAC11131.1| 198|Homo sapiens protein ( Homo sapiens
cDNA FLJ90196 fis, clone MAMMA1001344. ).
Length = 198
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDD---DNPIPGTSQTMGAT-PRGNVLNRVTHQQDKWKRQVRE 170
+P++ +R Q ++DD P + + R NVLN+V + Q +WK QV+E
Sbjct: 126 EPILKRRLFGHAQLIQSDDDIGDHQPFANAHDVLARSRSRANVLNKVEYAQQRWKLQVQE 185
Query: 171 QRRNIYDRHTMLN 209
QR++++DRH +L+
Sbjct: 186 QRKSVFDRHVVLS 198
>AJ400877-3|CAB92287.1| 198|Homo sapiens C11orf15 protein protein.
Length = 198
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDD---DNPIPGTSQTMGAT-PRGNVLNRVTHQQDKWKRQVRE 170
+P++ +R Q ++DD P + + R NVLN+V + Q +WK QV+E
Sbjct: 126 EPILKRRLFGHAQLIQSDDDIGDHQPFANAHDVLARSRSRANVLNKVEYAQQRWKLQVQE 185
Query: 171 QRRNIYDRHTMLN 209
QR++++DRH +L+
Sbjct: 186 QRKSVFDRHVVLS 198
>AB097017-1|BAC77370.1| 198|Homo sapiens putative NFkB activating
protein protein.
Length = 198
Score = 52.0 bits (119), Expect = 2e-06
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDD---DNPIPGTSQTMGAT-PRGNVLNRVTHQQDKWKRQVRE 170
+P++ +R Q ++DD P + + R NVLN+V + Q +WK QV+E
Sbjct: 126 EPILKRRLFGHAQLIQSDDDIGDHQPFANAHDVLARSRSRANVLNKVEYAQQRWKLQVQE 185
Query: 171 QRRNIYDRHTMLN 209
QR++++DRH +L+
Sbjct: 186 QRKSVFDRHVVLS 198
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,344,673
Number of Sequences: 237096
Number of extensions: 1913161
Number of successful extensions: 8032
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8032
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -