Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00976
(688 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089673-1|AAL90411.1| 227|Drosophila melanogaster RH45888p pro... 104 1e-22
AE014297-227|AAF52042.1| 227|Drosophila melanogaster CG1161-PA,... 104 1e-22
AE014297-226|AAX52934.1| 263|Drosophila melanogaster CG1161-PB,... 73 7e-19
AE014297-3316|AAF56126.3| 2236|Drosophila melanogaster CG6768-PA... 35 0.091
AB035512-1|BAB17608.1| 2220|Drosophila melanogaster DNA polymera... 35 0.12
BT010315-1|AAQ23633.1| 1559|Drosophila melanogaster AT27514p pro... 29 6.0
AE013599-1903|AAX52705.1| 1560|Drosophila melanogaster CG8787-PB... 29 6.0
AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA... 29 6.0
BT021434-1|AAX33582.1| 501|Drosophila melanogaster GH21414p pro... 29 7.9
AY060636-1|AAL28184.1| 501|Drosophila melanogaster GH05289p pro... 29 7.9
AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubuli... 29 7.9
AE014298-2158|ABC67184.1| 501|Drosophila melanogaster CG9201-PC... 29 7.9
AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB... 29 7.9
>AY089673-1|AAL90411.1| 227|Drosophila melanogaster RH45888p
protein.
Length = 227
Score = 104 bits (249), Expect = 1e-22
Identities = 49/71 (69%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDN--PIPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPL+NKR A+YQEHTNEDD+ P+P + + R NVLNRV HQQDKWKRQVREQR
Sbjct: 158 DPLLNKRVKANYQEHTNEDDEPTPPLPAVNN-QELSARANVLNRVGHQQDKWKRQVREQR 216
Query: 177 RNIYDRHTMLN 209
R+IYDRHTMLN
Sbjct: 217 RHIYDRHTMLN 227
>AE014297-227|AAF52042.1| 227|Drosophila melanogaster CG1161-PA,
isoform A protein.
Length = 227
Score = 104 bits (249), Expect = 1e-22
Identities = 49/71 (69%), Positives = 56/71 (78%), Gaps = 2/71 (2%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDN--PIPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQR 176
DPL+NKR A+YQEHTNEDD+ P+P + + R NVLNRV HQQDKWKRQVREQR
Sbjct: 158 DPLLNKRVKANYQEHTNEDDEPTPPLPAVNN-QELSARANVLNRVGHQQDKWKRQVREQR 216
Query: 177 RNIYDRHTMLN 209
R+IYDRHTMLN
Sbjct: 217 RHIYDRHTMLN 227
>AE014297-226|AAX52934.1| 263|Drosophila melanogaster CG1161-PB,
isoform B protein.
Length = 263
Score = 72.5 bits (170), Expect(2) = 7e-19
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +3
Query: 69 PIPGTSQTMGATPRGNVLNRVTHQQDKWKRQVREQRRNIYDRHTMLN 209
P+P + + R NVLNRV HQQDKWKRQVREQRR+IYDRHTMLN
Sbjct: 218 PLPAVNN-QELSARANVLNRVGHQQDKWKRQVREQRRHIYDRHTMLN 263
Score = 39.9 bits (89), Expect(2) = 7e-19
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 3 DPLINKRAMASYQEHTNEDDDNPI 74
DPL+NKR A+YQEHTNED N +
Sbjct: 158 DPLLNKRVKANYQEHTNEDVHNKL 181
>AE014297-3316|AAF56126.3| 2236|Drosophila melanogaster CG6768-PA
protein.
Length = 2236
Score = 35.1 bits (77), Expect = 0.091
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 6 PLINKRAMASYQEHTNEDDDNPIPGTSQTMGATP-----RGNVLNRVTHQQDKWKRQVRE 170
P++ KR +EH +E+ Q +GA P R ++ V Q+ KWK Q +
Sbjct: 1223 PIVTKRKRIQLEEHDDEEAQPQATTWRQALGAPPPIGETRKTIVEWVRFQKKKWKWQQDQ 1282
Query: 171 QRRN 182
++RN
Sbjct: 1283 RQRN 1286
>AB035512-1|BAB17608.1| 2220|Drosophila melanogaster DNA polymerase
epsilon protein.
Length = 2220
Score = 34.7 bits (76), Expect = 0.12
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +3
Query: 6 PLINKRAMASYQEHTNEDDDNPIPGTSQTMGATP-----RGNVLNRVTHQQDKWKRQVRE 170
P++ KR +EH E+ Q +GA P R ++ V Q+ KWK Q +
Sbjct: 1223 PIVTKRKRIQLEEHDEEEAQPQATTWRQALGAPPPIGETRKTIVEWVRFQKKKWKWQQDQ 1282
Query: 171 QRRN 182
++RN
Sbjct: 1283 RQRN 1286
>BT010315-1|AAQ23633.1| 1559|Drosophila melanogaster AT27514p
protein.
Length = 1559
Score = 29.1 bits (62), Expect = 6.0
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 39 QEHTNEDDDNPIPGTSQTMGATPRGNV 119
+EH+++ +D+P+P S G+TP ++
Sbjct: 652 EEHSDKPEDSPLPIASSISGSTPASSI 678
>AE013599-1903|AAX52705.1| 1560|Drosophila melanogaster CG8787-PB,
isoform B protein.
Length = 1560
Score = 29.1 bits (62), Expect = 6.0
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 39 QEHTNEDDDNPIPGTSQTMGATPRGNV 119
+EH+++ +D+P+P S G+TP ++
Sbjct: 653 EEHSDKPEDSPLPIASSISGSTPASSI 679
>AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA,
isoform A protein.
Length = 1669
Score = 29.1 bits (62), Expect = 6.0
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3
Query: 39 QEHTNEDDDNPIPGTSQTMGATPRGNV 119
+EH+++ +D+P+P S G+TP ++
Sbjct: 653 EEHSDKPEDSPLPIASSISGSTPASSI 679
>BT021434-1|AAX33582.1| 501|Drosophila melanogaster GH21414p
protein.
Length = 501
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 374 LQDTTKNYKNIKYXXXXXXXXXXXHWIRCYSQLCHIRSECVHKNRHNNLS 523
+ D+ ++++Y +IRC+ L I + VH+N H LS
Sbjct: 440 IDDSETQRRSLEYLALNQVAEIELTYIRCHQMLADILNTLVHQNDHGFLS 489
>AY060636-1|AAL28184.1| 501|Drosophila melanogaster GH05289p
protein.
Length = 501
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 374 LQDTTKNYKNIKYXXXXXXXXXXXHWIRCYSQLCHIRSECVHKNRHNNLS 523
+ D+ ++++Y +IRC+ L I + VH+N H LS
Sbjct: 440 IDDSETQRRSLEYLALNQVAEIELTYIRCHQMLADILNTLVHQNDHGFLS 489
>AJ291604-1|CAC20096.1| 1092|Drosophila melanogaster gamma-tubulin
ring protein protein.
Length = 1092
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 374 LQDTTKNYKNIKYXXXXXXXXXXXHWIRCYSQLCHIRSECVHKNRHNNLS 523
+ D+ ++++Y +IRC+ L I + VH+N H LS
Sbjct: 1031 IDDSETQRRSLEYLALNQVAEIELTYIRCHQMLADILNTLVHQNDHGFLS 1080
>AE014298-2158|ABC67184.1| 501|Drosophila melanogaster CG9201-PC,
isoform C protein.
Length = 501
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 374 LQDTTKNYKNIKYXXXXXXXXXXXHWIRCYSQLCHIRSECVHKNRHNNLS 523
+ D+ ++++Y +IRC+ L I + VH+N H LS
Sbjct: 440 IDDSETQRRSLEYLALNQVAEIELTYIRCHQMLADILNTLVHQNDHGFLS 489
>AE014298-2157|AAF48460.2| 1092|Drosophila melanogaster CG9201-PB,
isoform B protein.
Length = 1092
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +2
Query: 374 LQDTTKNYKNIKYXXXXXXXXXXXHWIRCYSQLCHIRSECVHKNRHNNLS 523
+ D+ ++++Y +IRC+ L I + VH+N H LS
Sbjct: 1031 IDDSETQRRSLEYLALNQVAEIELTYIRCHQMLADILNTLVHQNDHGFLS 1080
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,301,642
Number of Sequences: 53049
Number of extensions: 616361
Number of successful extensions: 1700
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1696
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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