Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00975
         (725 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g16120.1 68414.m01932 wall-associated kinase, putative contai...    29   3.1  
At3g58050.1 68416.m06471 expressed protein                             28   5.5  
At3g14000.2 68416.m01768 expressed protein                             28   7.2  
At3g14000.1 68416.m01767 expressed protein                             28   7.2  
At1g20150.1 68414.m02520 subtilase family protein similar to sub...    27   9.6  

>At1g16120.1 68414.m01932 wall-associated kinase, putative contains
           similarity to wall-associated kinase 4 GI:3355308 from
           [Arabidopsis thaliana]
          Length = 730

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +2

Query: 221 HVTTRSSKTTSPVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 352
           + TT  S TT P+L +  +R V ++I  PD+   + LVQ  GPV
Sbjct: 70  NTTTSDSNTTVPLLSM-INREV-VNISLPDSNEPYGLVQIKGPV 111


>At3g58050.1 68416.m06471 expressed protein
          Length = 1209

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 78  TLSSSHQSETWDPEAKAEYPRSN 146
           T  S H  + W+P    +YPRSN
Sbjct: 834 TRDSLHSKQVWEPMEPKKYPRSN 856


>At3g14000.2 68416.m01768 expressed protein
          Length = 374

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 653 VAPSPAQFRYNYT*NGDGTTSPKWVSRRFVHFLAFFLGDAALP 525
           VA +  +FRY Y   G G+++PK + +     L  FL     P
Sbjct: 81  VASNSGRFRYAYKRAGSGSSTPKILGKEMESRLKGFLSGEGTP 123


>At3g14000.1 68416.m01767 expressed protein
          Length = 374

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 653 VAPSPAQFRYNYT*NGDGTTSPKWVSRRFVHFLAFFLGDAALP 525
           VA +  +FRY Y   G G+++PK + +     L  FL     P
Sbjct: 81  VASNSGRFRYAYKRAGSGSSTPKILGKEMESRLKGFLSGEGTP 123


>At1g20150.1 68414.m02520 subtilase family protein similar to
           subtilisin-type protease precursor GI:14150446 from
           [Glycine max]
          Length = 780

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +2

Query: 98  VRDMGSRGKSRIPTQQQARHSSSIVRSRCQTR*IKCDTGGSHVTTRSSKTTSP 256
           V  + +R KSR P+      S + +RS   T  ++    GSH+TT + +  +P
Sbjct: 556 VSGIAARLKSRYPSW-----SPAAIRSAIMTTAVQMTNTGSHITTETGEKATP 603


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,781,722
Number of Sequences: 28952
Number of extensions: 290057
Number of successful extensions: 682
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)