Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00974
(420 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical ... 100 8e-22
Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical pr... 90 5e-19
Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical pr... 90 5e-19
AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical ... 35 0.027
U40800-5|AAO91743.1| 936|Caenorhabditis elegans Hypothetical pr... 34 0.047
Z77663-7|CAB01206.1| 856|Caenorhabditis elegans Hypothetical pr... 33 0.083
U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical p... 33 0.083
Z92815-3|CAB07291.1| 307|Caenorhabditis elegans Hypothetical pr... 29 1.4
AC024797-2|AAF60705.3| 339|Caenorhabditis elegans Hypothetical ... 28 2.4
Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical pr... 27 7.2
U32305-16|AAN63464.1| 275|Caenorhabditis elegans Hypothetical p... 27 7.2
U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical p... 27 7.2
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 26 9.5
AF078785-10|AAC27096.3| 174|Caenorhabditis elegans Hypothetical... 26 9.5
>AF026208-3|AAB71267.3| 903|Caenorhabditis elegans Hypothetical
protein F52D1.1 protein.
Length = 903
Score = 99.5 bits (237), Expect = 8e-22
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +2
Query: 2 PGSSSYPDFFNPVVSRYYSDRYRFENFPGTSKDVHLWNDMNEPSVFNGPEVTMPKDCRHY 181
PG S+Y DF NP +++S+++ F+ + GT+KDVH+WNDMNEPSVFNGPE+TM KD +H+
Sbjct: 456 PGDSTYIDFINPKARKWWSEQFAFDKYKGTTKDVHIWNDMNEPSVFNGPEITMHKDAKHH 515
Query: 182 KPPQDGLEGLADYWEHRHVHNEYG 253
+EHR VHN YG
Sbjct: 516 -----------GEFEHRDVHNVYG 528
Score = 55.2 bits (127), Expect = 2e-08
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +3
Query: 309 RPFLLTRAVXAGTQRYSAVWTGDNTAEWSFLAASVPM 419
RPF+L+R+ AG+QR +AVWTGDN A+W+ L S+PM
Sbjct: 548 RPFVLSRSFFAGSQRTAAVWTGDNKADWAHLKQSIPM 584
>Z70753-5|CAB54240.1| 910|Caenorhabditis elegans Hypothetical
protein F40F9.6b protein.
Length = 910
Score = 90.2 bits (214), Expect = 5e-19
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +2
Query: 2 PGSSSYPDFFNPVVSRYYSDRYRFENFPGTSKDVHLWNDMNEPSVFNGPEVTMPKDCRHY 181
PGSS Y DF++P Y+ D++ F+ + G+S ++H+WNDMNEPSVF+GPE+TM K+ HY
Sbjct: 464 PGSSEYLDFWHPDTRSYWKDQFAFDRYTGSSSNLHIWNDMNEPSVFSGPEITMDKESIHY 523
Query: 182 KPPQDGLEGLADYWEHRHVHNEYG 253
G+ EHR +HN YG
Sbjct: 524 ----GGI-------EHREIHNMYG 536
Score = 55.6 bits (128), Expect = 1e-08
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +3
Query: 309 RPFLLTRAVXAGTQRYSAVWTGDNTAEWSFLAASVPM 419
RPFLL+RA GTQR +A+WTGDNTA+W L + PM
Sbjct: 556 RPFLLSRAGFIGTQRTAAIWTGDNTADWGHLEIAAPM 592
>Z70753-4|CAA94764.1| 924|Caenorhabditis elegans Hypothetical
protein F40F9.6a protein.
Length = 924
Score = 90.2 bits (214), Expect = 5e-19
Identities = 40/84 (47%), Positives = 56/84 (66%)
Frame = +2
Query: 2 PGSSSYPDFFNPVVSRYYSDRYRFENFPGTSKDVHLWNDMNEPSVFNGPEVTMPKDCRHY 181
PGSS Y DF++P Y+ D++ F+ + G+S ++H+WNDMNEPSVF+GPE+TM K+ HY
Sbjct: 478 PGSSEYLDFWHPDTRSYWKDQFAFDRYTGSSSNLHIWNDMNEPSVFSGPEITMDKESIHY 537
Query: 182 KPPQDGLEGLADYWEHRHVHNEYG 253
G+ EHR +HN YG
Sbjct: 538 ----GGI-------EHREIHNMYG 550
Score = 55.6 bits (128), Expect = 1e-08
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +3
Query: 309 RPFLLTRAVXAGTQRYSAVWTGDNTAEWSFLAASVPM 419
RPFLL+RA GTQR +A+WTGDNTA+W L + PM
Sbjct: 570 RPFLLSRAGFIGTQRTAAIWTGDNTADWGHLEIAAPM 606
>AF040661-9|AAG24214.1| 345|Caenorhabditis elegans Hypothetical
protein W10G11.5 protein.
Length = 345
Score = 34.7 bits (76), Expect = 0.027
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 99 TSTCGTI*TNPVSSTVQRSPCPRTVATTSHPRTV 200
TST T+ T P+ +TV + P TV TTS P TV
Sbjct: 98 TSTTTTVTTTPIPTTVTSTHIPTTVTTTSIPTTV 131
>U40800-5|AAO91743.1| 936|Caenorhabditis elegans Hypothetical
protein D2096.3 protein.
Length = 936
Score = 33.9 bits (74), Expect = 0.047
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 309 RPFLLTRAVXAGTQRYSAVWTGDNTAEWSFLAASV 413
R +++R+ + RY W GDNTA W L SV
Sbjct: 570 RSAVISRSTFPSSGRYGGHWLGDNTARWGDLQTSV 604
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 8 SSSYPDFFNPVVSRYYSDRYRFENFPGTSKDVHLWNDMNEPSVFN 142
++++PDF +P + F F T +W DMNEPS F+
Sbjct: 437 NTAFPDFLDPRNNTNAWWAGEFAQFHKTLPFDGMWIDMNEPSNFD 481
>Z77663-7|CAB01206.1| 856|Caenorhabditis elegans Hypothetical
protein F53F4.8 protein.
Length = 856
Score = 33.1 bits (72), Expect = 0.083
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 309 RPFLLTRAVXAGTQRYSAVWTGDNTAEWSFLAASV 413
R +++R+ RY+ W GDNTA W L SV
Sbjct: 498 RGAVVSRSTFPSAGRYAGHWLGDNTARWEDLRTSV 532
>U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical
protein R05F9.12 protein.
Length = 955
Score = 33.1 bits (72), Expect = 0.083
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 309 RPFLLTRAVXAGTQRYSAVWTGDNTAEWSFLAASV 413
R +++R+ RY+ W GDNTA W L SV
Sbjct: 565 RGAVVSRSTYPSAGRYAGHWLGDNTARWEDLRTSV 599
>Z92815-3|CAB07291.1| 307|Caenorhabditis elegans Hypothetical
protein W01F3.2 protein.
Length = 307
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/69 (23%), Positives = 29/69 (42%)
Frame = +2
Query: 17 YPDFFNPVVSRYYSDRYRFENFPGTSKDVHLWNDMNEPSVFNGPEVTMPKDCRHYKPPQD 196
Y +++N + ++ Y FEN P + + WN ++ + D K D
Sbjct: 240 YDEYWNKSLMTGRTESY-FENLPDRVRGISTWNSQGHAHIYT-QSLVFEYDSEMKKVTGD 297
Query: 197 GLEGLADYW 223
G+ L D+W
Sbjct: 298 GVP-LGDFW 305
>AC024797-2|AAF60705.3| 339|Caenorhabditis elegans Hypothetical
protein Y48G8AR.2 protein.
Length = 339
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 273 GGAQVPRPYSLCTCLCSQ*SASPSRPSW 190
G AQ P+ YSLCT S+ S ++ W
Sbjct: 132 GSAQNPQKYSLCTVCYSERELSAAKNEW 159
>Z83218-2|CAB05687.1| 705|Caenorhabditis elegans Hypothetical
protein C31A11.5 protein.
Length = 705
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = -1
Query: 318 GRVCRPVGAVQQ--PRVGGAQVPRPYSLCTCLCSQ*SASPSRPSWG 187
G VC P +Q P V +P++ C CS + WG
Sbjct: 151 GAVCMPYSCSEQDLPTVYNQVSDQPFTACAAFCSSYPVKKTPAFWG 196
>U32305-16|AAN63464.1| 275|Caenorhabditis elegans Hypothetical
protein B0336.11b protein.
Length = 275
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 179 YKPPQDGLEGLADYWEHRHVHNEYGRGTCAPPTRGCWTAPTGLQTL 316
YK DG E L +W RH + EY +G C P T TGL+ +
Sbjct: 126 YKNGDDGFEKLFTFWIERH-YMEY-KG-CQPLTVFIDMTGTGLKNM 168
>U32305-15|AAK18858.4| 567|Caenorhabditis elegans Hypothetical
protein B0336.11a protein.
Length = 567
Score = 26.6 bits (56), Expect = 7.2
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 179 YKPPQDGLEGLADYWEHRHVHNEYGRGTCAPPTRGCWTAPTGLQTL 316
YK DG E L +W RH + EY +G C P T TGL+ +
Sbjct: 126 YKNGDDGFEKLFTFWIERH-YMEY-KG-CQPLTVFIDMTGTGLKNM 168
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 26.2 bits (55), Expect = 9.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 62 RYRFENFPGTSKDVHLWNDM 121
++ F F G ++D+H WND+
Sbjct: 576 KWVFGGFLGENRDIHKWNDV 595
>AF078785-10|AAC27096.3| 174|Caenorhabditis elegans Hypothetical
protein C04E12.11 protein.
Length = 174
Score = 26.2 bits (55), Expect = 9.5
Identities = 19/75 (25%), Positives = 29/75 (38%)
Frame = +2
Query: 110 WNDMNEPSVFNGPEVTMPKDCRHYKPPQDGLEGLADYWEHRHVHNEYGRGTCAPPTRGCW 289
W + FNG +++ HY + L+ W NE G A P +
Sbjct: 53 WKNYENACKFNGSSISIRPRSIHYSANVNYLDYTQLLWTCEDGKNELAAGEYAWPF--SY 110
Query: 290 TAPTGLQTLPAHEGR 334
T PT + P+ EG+
Sbjct: 111 TLPTNIP--PSFEGK 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,752,640
Number of Sequences: 27780
Number of extensions: 211027
Number of successful extensions: 664
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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