Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00973
(685 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 26 0.25
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 24 1.0
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 24 1.3
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 24 1.3
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 23 1.8
Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor ... 22 4.1
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 22 4.1
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 7.1
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 7.1
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 21 7.1
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 7.1
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 7.1
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 21 7.1
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 21 9.4
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 9.4
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 9.4
AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450 ... 21 9.4
AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450 ... 21 9.4
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 26.2 bits (55), Expect = 0.25
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 409 FLPKTSPTIPQKNALATPPLIKAMLINPA 323
FL P +PQ L PP+ +INP+
Sbjct: 169 FLCNNYPPLPQVPPLPLPPIFPPTMINPS 197
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1
Query: 157 LRWHLVRLPCLCEWGF 110
LRWH P +C W F
Sbjct: 336 LRWHTGERPFVCNWLF 351
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 117 GASDFRGDFLNHYFGLAKKKNI 52
G DFR DFL Y+ ++++I
Sbjct: 205 GYEDFRRDFLRTYWSAKRQRDI 226
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 193 LLCPARFRNPPSLRWH 146
LLCPA+ PS RW+
Sbjct: 252 LLCPAQGFPSPSFRWY 267
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 129 HGNLTRCHRRDGGLRNRAGQSRV 197
H N+T H DGGL S+V
Sbjct: 475 HLNITAIHTNDGGLYRCVASSKV 497
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 281 DVRHNAVLHPDAKKAHTHAPKALRLK 204
+V H+A + KK H +P AL+ K
Sbjct: 234 EVNHSAPITTCNKKQHLESPSALQAK 259
>Z69735-1|CAA93623.1| 162|Tribolium castaneum initiation factor
5-like protein protein.
Length = 162
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 432 ATSSLGCSSCRRHRPL 385
+T S GC +C H PL
Sbjct: 30 STISQGCKACGYHSPL 45
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 409 FLPKTSPTIPQKNALATPPLIKAMLINPA 323
FL +PQ L PP+ +INP+
Sbjct: 169 FLCNNYLPLPQVPPLPLPPIFAPTMINPS 197
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 239 LSSHQGAELHYVLRP 283
L SH G +H+ +RP
Sbjct: 89 LHSHHGPPIHHQIRP 103
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = +2
Query: 407 EEHPKLDVAPGCSDNFSPKHRSRLQTSAGS*NHQGF 514
EE+ + P D F H + Q G NHQ +
Sbjct: 35 EEYNQNSYIPPGGDFFGNHHIQQQQLQYGYHNHQNY 70
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 239 LSSHQGAELHYVLRP 283
L SH G +H+ +RP
Sbjct: 89 LHSHHGPPIHHQIRP 103
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = +2
Query: 407 EEHPKLDVAPGCSDNFSPKHRSRLQTSAGS*NHQGF 514
EE+ + P D F H + Q G NHQ +
Sbjct: 35 EEYNQNSYIPPGGDFFGNHHIQQQQLQYGYHNHQNY 70
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 21.4 bits (43), Expect = 7.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 300 ELQLTTYQAGLINMAFMSGGVAS 368
EL+ GLI A +SGG+AS
Sbjct: 165 ELKSALNAKGLILSAAVSGGIAS 187
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 21.4 bits (43), Expect = 7.1
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -2
Query: 492 PAEVCSLERCFGLKLSLHPGATSSLGCSSCRRHRPLYP 379
PAE + + ++ L PG S C +P++P
Sbjct: 108 PAEKYDQQHLYHPQVLLSPGGYSGSLCDQGFAQQPMFP 145
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 239 LSSHQGAELHYVLRP 283
L SH G +H+ +RP
Sbjct: 89 LHSHHGPPIHHQIRP 103
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = +2
Query: 407 EEHPKLDVAPGCSDNFSPKHRSRLQTSAGS*NHQGF 514
EE+ + P D F H + Q G NHQ +
Sbjct: 35 EEYNQNSYIPPGGDFFGNHHIQQQQLQYGYHNHQNY 70
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 239 LSSHQGAELHYVLRP 283
L SH G +H+ +RP
Sbjct: 89 LHSHHGPPIHHQIRP 103
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = +2
Query: 407 EEHPKLDVAPGCSDNFSPKHRSRLQTSAGS*NHQGF 514
EE+ + P D F H + Q G NHQ +
Sbjct: 35 EEYNQNSYIPPGGDFFGNHHIQQQQLQYGYHNHQNY 70
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 535 CSWTSYNEPLMVLAA 491
CSWTS +MV A
Sbjct: 149 CSWTSRRSKVMVYLA 163
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 72 TQNNGSENRPENRKPHSQR 128
++NN N E +KPH ++
Sbjct: 463 SKNNQDGNNGEKKKPHIKK 481
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +3
Query: 72 TQNNGSENRPENRKPHSQR 128
++NN N E +KPH ++
Sbjct: 355 SKNNQDGNNGEKKKPHIKK 373
>AY337337-1|AAP94192.1| 505|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 505
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 281 DVRHNAVLHPDAKK 240
D+ HN ++PD +K
Sbjct: 409 DLHHNPAIYPDPEK 422
>AF254755-1|AAF70496.1| 505|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q7 protein.
Length = 505
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 281 DVRHNAVLHPDAKK 240
D+ HN ++PD +K
Sbjct: 409 DLHHNPAIYPDPEK 422
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,340
Number of Sequences: 336
Number of extensions: 3881
Number of successful extensions: 24
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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