Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00973
(685 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 30 0.36
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 29 0.47
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 29 0.83
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 28 1.1
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 28 1.1
SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase |Schizosac... 27 1.9
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 27 1.9
SPAC8C9.19 |||conserved fungal protein|Schizosaccharomyces pombe... 26 4.4
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 26 5.8
SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD subfamily|Sch... 25 7.7
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 29.9 bits (64), Expect = 0.36
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 327 GLINMAFMSGGVASAFFWGIVGDVFGRK 410
GL+N A G V +G +GD FGRK
Sbjct: 91 GLVNAAANIGNVFGQILFGFMGDFFGRK 118
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 29.5 bits (63), Expect = 0.47
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 327 GLINMAFMSGGVASAFFWGIVGDVFGRK 410
GL+N A G + +G +GD FGRK
Sbjct: 96 GLVNAASNIGNIFGQLMFGFMGDFFGRK 123
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 28.7 bits (61), Expect = 0.83
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 327 GLINMAFMSGGVASAFFWGIVGDVFGRK 410
G++N A G + +G +GD FGRK
Sbjct: 86 GVVNAATNIGNIMGQLLFGFLGDFFGRK 113
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 327 GLINMAFMSGGVASAFFWGIVGDVFGRK 410
GL+N + G + +G +GD FGRK
Sbjct: 96 GLVNASANIGNIFGQLLFGFMGDFFGRK 123
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -1
Query: 523 SYNEPLMVLAASRSL*SGTVLWAKVIAASRSNVKLRVLFLPKTSPTIPQKNALAT 359
SY E L++L ASR L ++WAK + A + + R TS + + T
Sbjct: 636 SYKEHLVLLTASRILFFRNLVWAKDLMAQKKAYERRYKNFTTTSSSFDTLQGIDT 690
>SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 27.5 bits (58), Expect = 1.9
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 472 GTVLWAKV-IAASRSNVKLRVLFLPKTSPTIPQKNALATPPLIKAMLINPAWY 317
G +L++ V IAA R +VK L +S I ++ LAT L+ A+ + P Y
Sbjct: 407 GAILFSPVFIAAHRISVKKAAAALKASSVKIQGRDILATWKLLVALGMTPILY 459
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1
Query: 433 SNVKLRVLFLPKT-SPTIPQKNALATPPLIKAMLINPAWYVVSCSSHLA 290
S+ KL LPKT + IPQ NAL T P I+ + + S H++
Sbjct: 32 SSEKLNRASLPKTQNSAIPQSNALNTTPNESTSQIDSSPKIPSAVPHIS 80
>SPAC8C9.19 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 94
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 198 RPLQPECFRSVRVRFLRIRVQNCI 269
R LQ CFR +V F +IRV + I
Sbjct: 68 RLLQSVCFRQCQVEFAQIRVSSII 91
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 531 LHWSSRIYQT*LELRRDNS 587
+HW+S +YQ L L+ +NS
Sbjct: 381 VHWNSTVYQELLNLKSNNS 399
>SPAC4H3.05 |srs2||ATP-dependent DNA helicase, UvrD
subfamily|Schizosaccharomyces pombe|chr 1|||Manual
Length = 887
Score = 25.4 bits (53), Expect = 7.7
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 157 LRWHLVRLPCLCE 119
L W +V LPCLCE
Sbjct: 598 LEWPVVFLPCLCE 610
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,937,160
Number of Sequences: 5004
Number of extensions: 61154
Number of successful extensions: 160
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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