Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00973
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   5.1  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    23   9.0  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +3

Query: 99  PENRKPHSQRHGNLTRCHRRDGGLRNRAGQSRVRPLQPECFR 224
           P + + HSQR  +      R+ G +   G    RP+ P   R
Sbjct: 43  PGSSRRHSQRRRHKHHQASRENGDKGSTGSEAERPVTPPAQR 84


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -3

Query: 278 VRHNAVLHPDAKKAHTHAPKALRLKRPYP 192
           V  N V HP     H H  KA  +KR  P
Sbjct: 202 VAMNPVEHPHGGGNHQHIGKASTVKRGTP 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,737
Number of Sequences: 2352
Number of extensions: 16531
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)