Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00973
(685 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC094722-1|AAH94722.1| 548|Homo sapiens SV2 related protein hom... 42 0.002
BC033587-1|AAH33587.1| 548|Homo sapiens SV2 related protein hom... 42 0.002
BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle glycop... 40 0.008
BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle glycop... 40 0.008
BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle glycop... 40 0.008
BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle glycop... 40 0.008
BX537754-1|CAD97824.1| 742|Homo sapiens hypothetical protein pr... 38 0.025
BC045111-1|AAH45111.1| 742|Homo sapiens synaptic vesicle glycop... 38 0.025
BC000776-1|AAH00776.2| 604|Homo sapiens SV2A protein protein. 38 0.025
AL591493-21|CAI12573.1| 682|Homo sapiens synaptic vesicle glyco... 38 0.025
AL591493-20|CAI12572.1| 742|Homo sapiens synaptic vesicle glyco... 38 0.025
AK075480-1|BAC11645.1| 682|Homo sapiens protein ( Homo sapiens ... 38 0.025
AB018279-1|BAA34456.2| 748|Homo sapiens KIAA0736 protein protein. 38 0.025
>BC094722-1|AAH94722.1| 548|Homo sapiens SV2 related protein
homolog (rat) protein.
Length = 548
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = +3
Query: 267 IMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXXXXXX 446
I+S + P CE +L ++Q L+ G ++S+ WG + D +GRK+
Sbjct: 103 ILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLY 162
Query: 447 XXXXQSTVPDYRLLLAARTIKG 512
+ P Y +L R + G
Sbjct: 163 YGILSAFAPVYSWILVLRGLVG 184
>BC033587-1|AAH33587.1| 548|Homo sapiens SV2 related protein
homolog (rat) protein.
Length = 548
Score = 42.3 bits (95), Expect = 0.002
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = +3
Query: 267 IMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXXXXXX 446
I+S + P CE +L ++Q L+ G ++S+ WG + D +GRK+
Sbjct: 103 ILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLY 162
Query: 447 XXXXQSTVPDYRLLLAARTIKG 512
+ P Y +L R + G
Sbjct: 163 YGILSAFAPVYSWILVLRGLVG 184
>BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/86 (26%), Positives = 35/86 (40%)
Frame = +3
Query: 255 VQNCIMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXX 434
V+ ++ +VLP+A +L + +G + G + AFFWG + D GRK
Sbjct: 167 VEVFVVGFVLPSAETDLCIPNSGSGWLGSIVYLGMMVGAFFWGGLADKVGRKQSLLICMS 226
Query: 435 XXXXXXXXQSTVPDYRLLLAARTIKG 512
S V Y L R + G
Sbjct: 227 VNGFFAFLSSFVQGYGFFLFCRLLSG 252
>BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/86 (26%), Positives = 35/86 (40%)
Frame = +3
Query: 255 VQNCIMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXX 434
V+ ++ +VLP+A +L + +G + G + AFFWG + D GRK
Sbjct: 167 VEVFVVGFVLPSAETDLCIPNSGSGWLGSIVYLGMMVGAFFWGGLADKVGRKQSLLICMS 226
Query: 435 XXXXXXXXQSTVPDYRLLLAARTIKG 512
S V Y L R + G
Sbjct: 227 VNGFFAFLSSFVQGYGFFLFCRLLSG 252
>BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/86 (26%), Positives = 35/86 (40%)
Frame = +3
Query: 255 VQNCIMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXX 434
V+ ++ +VLP+A +L + +G + G + AFFWG + D GRK
Sbjct: 167 VEVFVVGFVLPSAETDLCIPNSGSGWLGSIVYLGMMVGAFFWGGLADKVGRKQSLLICMS 226
Query: 435 XXXXXXXXQSTVPDYRLLLAARTIKG 512
S V Y L R + G
Sbjct: 227 VNGFFAFLSSFVQGYGFFLFCRLLSG 252
>BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 39.9 bits (89), Expect = 0.008
Identities = 23/86 (26%), Positives = 35/86 (40%)
Frame = +3
Query: 255 VQNCIMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXX 434
V+ ++ +VLP+A +L + +G + G + AFFWG + D GRK
Sbjct: 167 VEVFVVGFVLPSAETDLCIPNSGSGWLGSIVYLGMMVGAFFWGGLADKVGRKQSLLICMS 226
Query: 435 XXXXXXXXQSTVPDYRLLLAARTIKG 512
S V Y L R + G
Sbjct: 227 VNGFFAFLSSFVQGYGFFLFCRLLSG 252
>BX537754-1|CAD97824.1| 742|Homo sapiens hypothetical protein
protein.
Length = 742
Score = 38.3 bits (85), Expect = 0.025
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 255 VQNCIMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXX 434
V+ ++ +VLP+A ++ L+ G++ + G + AF WG + D GR+
Sbjct: 181 VEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLS 240
Query: 435 XXXXXXXXQSTVPDYRLLLAARTIKG 512
S V Y L R + G
Sbjct: 241 VNSVFAFFSSFVQGYGTFLFCRLLSG 266
>BC045111-1|AAH45111.1| 742|Homo sapiens synaptic vesicle
glycoprotein 2A protein.
Length = 742
Score = 38.3 bits (85), Expect = 0.025
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 255 VQNCIMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXX 434
V+ ++ +VLP+A ++ L+ G++ + G + AF WG + D GR+
Sbjct: 181 VEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLS 240
Query: 435 XXXXXXXXQSTVPDYRLLLAARTIKG 512
S V Y L R + G
Sbjct: 241 VNSVFAFFSSFVQGYGTFLFCRLLSG 266
>BC000776-1|AAH00776.2| 604|Homo sapiens SV2A protein protein.
Length = 604
Score = 38.3 bits (85), Expect = 0.025
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 255 VQNCIMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXX 434
V+ ++ +VLP+A ++ L+ G++ + G + AF WG + D GR+
Sbjct: 43 VEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLS 102
Query: 435 XXXXXXXXQSTVPDYRLLLAARTIKG 512
S V Y L R + G
Sbjct: 103 VNSVFAFFSSFVQGYGTFLFCRLLSG 128
>AL591493-21|CAI12573.1| 682|Homo sapiens synaptic vesicle
glycoprotein 2A protein.
Length = 682
Score = 38.3 bits (85), Expect = 0.025
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 255 VQNCIMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXX 434
V+ ++ +VLP+A ++ L+ G++ + G + AF WG + D GR+
Sbjct: 181 VEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLS 240
Query: 435 XXXXXXXXQSTVPDYRLLLAARTIKG 512
S V Y L R + G
Sbjct: 241 VNSVFAFFSSFVQGYGTFLFCRLLSG 266
>AL591493-20|CAI12572.1| 742|Homo sapiens synaptic vesicle
glycoprotein 2A protein.
Length = 742
Score = 38.3 bits (85), Expect = 0.025
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 255 VQNCIMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXX 434
V+ ++ +VLP+A ++ L+ G++ + G + AF WG + D GR+
Sbjct: 181 VEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLS 240
Query: 435 XXXXXXXXQSTVPDYRLLLAARTIKG 512
S V Y L R + G
Sbjct: 241 VNSVFAFFSSFVQGYGTFLFCRLLSG 266
>AK075480-1|BAC11645.1| 682|Homo sapiens protein ( Homo sapiens
cDNA PSEC0174 fis, clone NT2RP2002760, highly similar to
SYNAPTIC VESICLE PROTEIN 2. ).
Length = 682
Score = 38.3 bits (85), Expect = 0.025
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 255 VQNCIMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXX 434
V+ ++ +VLP+A ++ L+ G++ + G + AF WG + D GR+
Sbjct: 181 VEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLS 240
Query: 435 XXXXXXXXQSTVPDYRLLLAARTIKG 512
S V Y L R + G
Sbjct: 241 VNSVFAFFSSFVQGYGTFLFCRLLSG 266
>AB018279-1|BAA34456.2| 748|Homo sapiens KIAA0736 protein protein.
Length = 748
Score = 38.3 bits (85), Expect = 0.025
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 255 VQNCIMSYVLPAARCELQLTTYQAGLINMAFMSGGVASAFFWGIVGDVFGRKSXXXXXXX 434
V+ ++ +VLP+A ++ L+ G++ + G + AF WG + D GR+
Sbjct: 187 VEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLS 246
Query: 435 XXXXXXXXQSTVPDYRLLLAARTIKG 512
S V Y L R + G
Sbjct: 247 VNSVFAFFSSFVQGYGTFLFCRLLSG 272
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,530,197
Number of Sequences: 237096
Number of extensions: 2510070
Number of successful extensions: 5022
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5022
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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